EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000013477 (Gene tree)
Gene ID: 103364064
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 3522 bases
Position: chrKK580784.1:329860-333381
Accession: 103364064
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000017824	RRM_1	PF00076.22	3.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000018099	-	1046	XM_008291070	ENSSPAP00000017824	100 (aa)	XP_008289292	UPI000497B043

Gene Model

Click here to download ENSSPAG00000013477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000013477's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000013477	slirp	80	35.065	ENSSPAG00000021157	-	64	35.065
ENSSPAG00000013477	slirp	80	35.065	ENSSPAG00000001196	-	64	35.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000013477	slirp	78	55.128	ENSG00000119705	SLIRP	92	55.714	Homo_sapiens
ENSSPAG00000013477	slirp	100	75.000	ENSAPOG00000001298	slirp	100	75.000	Acanthochromis_polyacanthus
ENSSPAG00000013477	slirp	70	54.286	ENSAMEG00000003975	SLIRP	77	54.286	Ailuropoda_melanoleuca
ENSSPAG00000013477	slirp	98	65.306	ENSACIG00000023083	slirp	97	65.306	Amphilophus_citrinellus
ENSSPAG00000013477	slirp	98	75.510	ENSAOCG00000006342	slirp	99	75.510	Amphiprion_ocellaris
ENSSPAG00000013477	slirp	96	76.042	ENSAPEG00000015719	-	98	76.042	Amphiprion_percula
ENSSPAG00000013477	slirp	98	75.510	ENSAPEG00000015917	slirp	99	75.510	Amphiprion_percula
ENSSPAG00000013477	slirp	98	67.347	ENSATEG00000013525	slirp	98	67.347	Anabas_testudineus
ENSSPAG00000013477	slirp	98	63.265	ENSAMXG00000018693	slirp	98	63.265	Astyanax_mexicanus
ENSSPAG00000013477	slirp	74	55.405	ENSCJAG00000016946	SLIRP	72	55.224	Callithrix_jacchus
ENSSPAG00000013477	slirp	74	55.405	ENSCAFG00020015876	-	67	55.405	Canis_lupus_dingo
ENSSPAG00000013477	slirp	74	54.054	ENSCCAG00000030130	SLIRP	69	54.054	Cebus_capucinus
ENSSPAG00000013477	slirp	74	52.703	ENSCATG00000036327	SLIRP	72	55.224	Cercocebus_atys
ENSSPAG00000013477	slirp	74	52.703	ENSCSAG00000011736	SLIRP	68	52.703	Chlorocebus_sabaeus
ENSSPAG00000013477	slirp	81	60.494	ENSCPBG00000026327	SLIRP	82	60.494	Chrysemys_picta_bellii
ENSSPAG00000013477	slirp	67	58.209	ENSCANG00000032892	SLIRP	68	58.209	Colobus_angolensis_palliatus
ENSSPAG00000013477	slirp	70	55.714	ENSCGRG00001024068	Slirp	63	55.714	Cricetulus_griseus_chok1gshd
ENSSPAG00000013477	slirp	70	55.714	ENSCGRG00000017440	Slirp	63	55.714	Cricetulus_griseus_crigri
ENSSPAG00000013477	slirp	84	54.762	ENSCSEG00000015766	slirp	86	54.762	Cynoglossus_semilaevis
ENSSPAG00000013477	slirp	90	67.778	ENSCVAG00000012504	slirp	86	67.778	Cyprinodon_variegatus
ENSSPAG00000013477	slirp	95	69.474	ENSDARG00000097753	slirp	95	69.388	Danio_rerio
ENSSPAG00000013477	slirp	74	51.351	ENSDNOG00000007721	SLIRP	67	51.351	Dasypus_novemcinctus
ENSSPAG00000013477	slirp	74	51.351	ENSDORG00000012379	Slirp	67	51.351	Dipodomys_ordii
ENSSPAG00000013477	slirp	87	43.678	ENSETEG00000010345	SLIRP	76	43.678	Echinops_telfairi
ENSSPAG00000013477	slirp	74	55.405	ENSEASG00005020193	SLIRP	67	55.405	Equus_asinus_asinus
ENSSPAG00000013477	slirp	87	47.126	ENSEEUG00000007257	SLIRP	86	47.126	Erinaceus_europaeus
ENSSPAG00000013477	slirp	96	64.583	ENSELUG00000016800	slirp	95	64.583	Esox_lucius
ENSSPAG00000013477	slirp	67	55.224	ENSFCAG00000036326	SLIRP	68	55.224	Felis_catus
ENSSPAG00000013477	slirp	77	50.649	ENSFALG00000012583	SLIRP	80	48.235	Ficedula_albicollis
ENSSPAG00000013477	slirp	74	54.054	ENSFDAG00000008347	SLIRP	65	54.054	Fukomys_damarensis
ENSSPAG00000013477	slirp	78	65.385	ENSFHEG00000004709	slirp	85	65.385	Fundulus_heteroclitus
ENSSPAG00000013477	slirp	97	69.072	ENSGMOG00000016948	slirp	93	69.072	Gadus_morhua
ENSSPAG00000013477	slirp	88	48.864	ENSGALG00000031238	SLIRP	85	48.864	Gallus_gallus
ENSSPAG00000013477	slirp	100	66.000	ENSGAFG00000010998	slirp	100	66.000	Gambusia_affinis
ENSSPAG00000013477	slirp	81	74.074	ENSGACG00000020137	slirp	94	74.074	Gasterosteus_aculeatus
ENSSPAG00000013477	slirp	98	58.163	ENSGAGG00000009953	SLIRP	68	58.163	Gopherus_agassizii
ENSSPAG00000013477	slirp	78	55.128	ENSGGOG00000011059	-	72	56.716	Gorilla_gorilla
ENSSPAG00000013477	slirp	70	52.857	ENSHGLG00000018491	SLIRP	63	52.857	Heterocephalus_glaber_female
ENSSPAG00000013477	slirp	70	52.857	ENSHGLG00100014153	SLIRP	63	52.857	Heterocephalus_glaber_male
ENSSPAG00000013477	slirp	95	72.632	ENSHCOG00000006795	slirp	96	72.632	Hippocampus_comes
ENSSPAG00000013477	slirp	98	68.367	ENSIPUG00000010214	SLIRP	98	68.367	Ictalurus_punctatus
ENSSPAG00000013477	slirp	74	50.000	ENSSTOG00000034316	SLIRP	67	50.000	Ictidomys_tridecemlineatus
ENSSPAG00000013477	slirp	100	60.000	ENSKMAG00000002038	slirp	96	60.000	Kryptolebias_marmoratus
ENSSPAG00000013477	slirp	100	63.000	ENSLBEG00000007564	slirp	100	63.000	Labrus_bergylta
ENSSPAG00000013477	slirp	97	65.979	ENSLACG00000013434	SLIRP	93	65.979	Latimeria_chalumnae
ENSSPAG00000013477	slirp	88	45.455	ENSMFAG00000042960	SLIRP	72	55.224	Macaca_fascicularis
ENSSPAG00000013477	slirp	83	51.807	ENSMMUG00000029256	SLIRP	72	55.224	Macaca_mulatta
ENSSPAG00000013477	slirp	88	45.455	ENSMNEG00000028921	SLIRP	72	55.224	Macaca_nemestrina
ENSSPAG00000013477	slirp	89	47.191	ENSMLEG00000043644	SLIRP	79	47.191	Mandrillus_leucophaeus
ENSSPAG00000013477	slirp	98	68.367	ENSMZEG00005004617	slirp	99	68.367	Maylandia_zebra
ENSSPAG00000013477	slirp	75	52.000	ENSMAUG00000003857	Slirp	68	52.000	Mesocricetus_auratus
ENSSPAG00000013477	slirp	75	57.333	ENSMICG00000012080	SLIRP	70	57.333	Microcebus_murinus
ENSSPAG00000013477	slirp	74	51.351	ENSMOCG00000016019	Slirp	69	52.857	Microtus_ochrogaster
ENSSPAG00000013477	slirp	100	71.000	ENSMMOG00000018268	slirp	100	71.000	Mola_mola
ENSSPAG00000013477	slirp	70	55.714	ENSMODG00000005207	-	99	55.714	Monodelphis_domestica
ENSSPAG00000013477	slirp	100	66.000	ENSMALG00000012581	slirp	100	66.000	Monopterus_albus
ENSSPAG00000013477	slirp	74	52.703	MGP_CAROLIEiJ_G0017995	Slirp	69	52.703	Mus_caroli
ENSSPAG00000013477	slirp	74	52.703	ENSMUSG00000021040	Slirp	71	52.857	Mus_musculus
ENSSPAG00000013477	slirp	74	52.703	MGP_SPRETEiJ_G0018840	Slirp	66	52.703	Mus_spretus
ENSSPAG00000013477	slirp	84	52.381	ENSMLUG00000029544	-	74	52.381	Myotis_lucifugus
ENSSPAG00000013477	slirp	88	48.864	ENSMLUG00000024998	-	87	47.475	Myotis_lucifugus
ENSSPAG00000013477	slirp	74	55.405	ENSNGAG00000016363	Slirp	71	55.405	Nannospalax_galili
ENSSPAG00000013477	slirp	75	53.333	ENSNLEG00000032459	-	73	51.471	Nomascus_leucogenys
ENSSPAG00000013477	slirp	75	53.333	ENSNLEG00000027238	-	80	52.857	Nomascus_leucogenys
ENSSPAG00000013477	slirp	74	52.703	ENSODEG00000012580	SLIRP	76	54.286	Octodon_degus
ENSSPAG00000013477	slirp	98	67.347	ENSONIG00000011692	slirp	99	67.347	Oreochromis_niloticus
ENSSPAG00000013477	slirp	76	53.947	ENSOANG00000022366	SLIRP	68	53.947	Ornithorhynchus_anatinus
ENSSPAG00000013477	slirp	100	76.000	ENSORLG00000010761	slirp	78	76.000	Oryzias_latipes
ENSSPAG00000013477	slirp	100	75.000	ENSORLG00020022188	slirp	100	75.000	Oryzias_latipes_hni
ENSSPAG00000013477	slirp	99	75.758	ENSORLG00015020171	slirp	98	75.758	Oryzias_latipes_hsok
ENSSPAG00000013477	slirp	100	75.000	ENSOMEG00000019321	slirp	100	75.000	Oryzias_melastigma
ENSSPAG00000013477	slirp	78	55.128	ENSPPAG00000040710	-	72	56.716	Pan_paniscus
ENSSPAG00000013477	slirp	67	55.224	ENSPPRG00000014350	SLIRP	68	55.224	Panthera_pardus
ENSSPAG00000013477	slirp	67	55.224	ENSPTIG00000014196	SLIRP	68	55.224	Panthera_tigris_altaica
ENSSPAG00000013477	slirp	78	55.128	ENSPTRG00000030691	SLIRP	74	55.128	Pan_troglodytes
ENSSPAG00000013477	slirp	74	54.054	ENSPANG00000026323	SLIRP	72	56.716	Papio_anubis
ENSSPAG00000013477	slirp	78	61.538	ENSPKIG00000008831	slirp	77	61.538	Paramormyrops_kingsleyae
ENSSPAG00000013477	slirp	80	71.250	ENSPMGG00000010541	slirp	92	71.250	Periophthalmus_magnuspinnatus
ENSSPAG00000013477	slirp	74	48.649	ENSPEMG00000013234	Slirp	69	50.000	Peromyscus_maniculatus_bairdii
ENSSPAG00000013477	slirp	85	52.941	ENSPMAG00000009355	slirp	94	52.941	Petromyzon_marinus
ENSSPAG00000013477	slirp	79	49.367	ENSPCIG00000026842	-	85	49.367	Phascolarctos_cinereus
ENSSPAG00000013477	slirp	99	67.677	ENSPFOG00000006758	slirp	99	67.677	Poecilia_formosa
ENSSPAG00000013477	slirp	99	67.677	ENSPLAG00000011140	slirp	99	67.677	Poecilia_latipinna
ENSSPAG00000013477	slirp	99	67.677	ENSPMEG00000019535	slirp	99	67.677	Poecilia_mexicana
ENSSPAG00000013477	slirp	99	67.677	ENSPREG00000011673	slirp	99	67.677	Poecilia_reticulata
ENSSPAG00000013477	slirp	74	51.351	ENSPPYG00000006030	SLIRP	68	51.351	Pongo_abelii
ENSSPAG00000013477	slirp	76	56.579	ENSPCOG00000015159	SLIRP	70	57.333	Propithecus_coquereli
ENSSPAG00000013477	slirp	98	71.429	ENSPNAG00000008633	slirp	99	71.429	Pygocentrus_nattereri
ENSSPAG00000013477	slirp	65	56.923	ENSRBIG00000031396	-	65	56.923	Rhinopithecus_bieti
ENSSPAG00000013477	slirp	67	55.224	ENSRBIG00000032998	-	62	55.224	Rhinopithecus_bieti
ENSSPAG00000013477	slirp	74	55.405	ENSRBIG00000032222	-	72	56.716	Rhinopithecus_bieti
ENSSPAG00000013477	slirp	74	50.000	ENSRBIG00000035817	-	68	50.000	Rhinopithecus_bieti
ENSSPAG00000013477	slirp	71	56.338	ENSRROG00000041312	-	70	56.338	Rhinopithecus_roxellana
ENSSPAG00000013477	slirp	67	56.716	ENSRROG00000017133	-	70	56.716	Rhinopithecus_roxellana
ENSSPAG00000013477	slirp	65	58.462	ENSRROG00000035604	-	65	58.462	Rhinopithecus_roxellana
ENSSPAG00000013477	slirp	74	55.405	ENSRROG00000036656	-	72	56.716	Rhinopithecus_roxellana
ENSSPAG00000013477	slirp	73	52.055	ENSSBOG00000020014	SLIRP	72	56.716	Saimiri_boliviensis_boliviensis
ENSSPAG00000013477	slirp	98	60.204	ENSSFOG00015011165	slirp	98	60.204	Scleropages_formosus
ENSSPAG00000013477	slirp	100	53.922	ENSSMAG00000012930	slirp	100	53.922	Scophthalmus_maximus
ENSSPAG00000013477	slirp	100	73.000	ENSSDUG00000021883	slirp	66	73.000	Seriola_dumerili
ENSSPAG00000013477	slirp	100	73.000	ENSSLDG00000023136	slirp	91	73.000	Seriola_lalandi_dorsalis
ENSSPAG00000013477	slirp	82	59.302	ENSSPUG00000009346	SLIRP	88	59.302	Sphenodon_punctatus
ENSSPAG00000013477	slirp	85	48.837	ENSSSCG00000028167	SLIRP	77	48.837	Sus_scrofa
ENSSPAG00000013477	slirp	77	49.351	ENSTGUG00000012337	SLIRP	88	45.161	Taeniopygia_guttata
ENSSPAG00000013477	slirp	98	64.646	ENSTRUG00000020127	slirp	98	64.646	Takifugu_rubripes
ENSSPAG00000013477	slirp	74	56.757	ENSUAMG00000022445	SLIRP	67	56.757	Ursus_americanus
ENSSPAG00000013477	slirp	74	56.757	ENSUMAG00000007166	SLIRP	67	56.757	Ursus_maritimus
ENSSPAG00000013477	slirp	76	52.632	ENSVPAG00000001781	SLIRP	69	52.632	Vicugna_pacos
ENSSPAG00000013477	slirp	74	54.054	ENSVVUG00000004436	SLIRP	67	54.054	Vulpes_vulpes
ENSSPAG00000013477	slirp	82	62.195	ENSXETG00000030343	SLIRP	92	62.195	Xenopus_tropicalis
ENSSPAG00000013477	slirp	100	66.000	ENSXCOG00000009422	slirp	100	66.000	Xiphophorus_couchianus
ENSSPAG00000013477	slirp	100	67.000	ENSXMAG00000015655	slirp	100	67.000	Xiphophorus_maculatus