EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000013497 (Gene tree)
Gene ID: 103366915
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H and coiled-coil domain-containing protein 1-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 4895 bases
Position: chrKK581064.1:199868-204762
Accession: 103366915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000017854	R3H	PF01424.22	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000018131	-	1501	XM_008294779	ENSSPAP00000017854	407 (aa)	XP_008293001	UPI0004963460

Gene Model

Click here to download ENSSPAG00000013497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000013497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000013497	r3hcc1	97	32.847	ENSG00000104679	R3HCC1	93	32.847	Homo_sapiens
ENSSPAG00000013497	r3hcc1	100	76.167	ENSAPOG00000003616	r3hcc1	92	76.167	Acanthochromis_polyacanthus
ENSSPAG00000013497	r3hcc1	68	47.333	ENSAMEG00000002963	R3HCC1	85	31.982	Ailuropoda_melanoleuca
ENSSPAG00000013497	r3hcc1	100	56.951	ENSACIG00000017144	r3hcc1	98	57.562	Amphilophus_citrinellus
ENSSPAG00000013497	r3hcc1	100	80.098	ENSAOCG00000003945	r3hcc1	100	80.098	Amphiprion_ocellaris
ENSSPAG00000013497	r3hcc1	100	80.344	ENSAPEG00000003613	r3hcc1	100	80.344	Amphiprion_percula
ENSSPAG00000013497	r3hcc1	93	65.296	ENSATEG00000023860	r3hcc1	99	67.176	Anabas_testudineus
ENSSPAG00000013497	r3hcc1	96	34.571	ENSACAG00000016627	R3HCC1	92	34.240	Anolis_carolinensis
ENSSPAG00000013497	r3hcc1	98	33.172	ENSANAG00000036169	R3HCC1	94	32.117	Aotus_nancymaae
ENSSPAG00000013497	r3hcc1	98	33.781	ENSBTAG00000025830	R3HCC1	91	33.781	Bos_taurus
ENSSPAG00000013497	r3hcc1	98	32.536	ENSCJAG00000020118	R3HCC1	94	32.697	Callithrix_jacchus
ENSSPAG00000013497	r3hcc1	98	31.868	ENSCAFG00000009210	R3HCC1	89	33.181	Canis_familiaris
ENSSPAG00000013497	r3hcc1	81	30.052	ENSCAFG00020012870	R3HCC1	81	31.452	Canis_lupus_dingo
ENSSPAG00000013497	r3hcc1	98	32.962	ENSCHIG00000009107	R3HCC1	94	32.962	Capra_hircus
ENSSPAG00000013497	r3hcc1	97	33.108	ENSTSYG00000000511	R3HCC1	72	33.333	Carlito_syrichta
ENSSPAG00000013497	r3hcc1	59	41.259	ENSCAPG00000015813	R3HCC1	55	41.259	Cavia_aperea
ENSSPAG00000013497	r3hcc1	66	48.951	ENSCPOG00000009696	R3HCC1	58	48.951	Cavia_porcellus
ENSSPAG00000013497	r3hcc1	97	31.963	ENSCCAG00000037811	R3HCC1	94	31.504	Cebus_capucinus
ENSSPAG00000013497	r3hcc1	97	32.719	ENSCATG00000032971	R3HCC1	92	33.835	Cercocebus_atys
ENSSPAG00000013497	r3hcc1	98	34.524	ENSCLAG00000015556	R3HCC1	79	34.524	Chinchilla_lanigera
ENSSPAG00000013497	r3hcc1	97	32.719	ENSCSAG00000016250	R3HCC1	86	33.034	Chlorocebus_sabaeus
ENSSPAG00000013497	r3hcc1	97	32.809	ENSCHOG00000000396	R3HCC1	90	33.408	Choloepus_hoffmanni
ENSSPAG00000013497	r3hcc1	97	33.079	ENSCANG00000029441	R3HCC1	93	32.603	Colobus_angolensis_palliatus
ENSSPAG00000013497	r3hcc1	68	46.667	ENSCGRG00001014977	R3hcc1	58	46.667	Cricetulus_griseus_chok1gshd
ENSSPAG00000013497	r3hcc1	68	46.667	ENSCGRG00000004454	R3hcc1	58	46.667	Cricetulus_griseus_crigri
ENSSPAG00000013497	r3hcc1	99	60.488	ENSCSEG00000005748	r3hcc1	98	60.488	Cynoglossus_semilaevis
ENSSPAG00000013497	r3hcc1	83	48.433	ENSCVAG00000002640	r3hcc1	94	48.433	Cyprinodon_variegatus
ENSSPAG00000013497	r3hcc1	99	40.741	ENSDARG00000099593	r3hcc1	96	40.741	Danio_rerio
ENSSPAG00000013497	r3hcc1	97	32.135	ENSDNOG00000007168	R3HCC1	86	32.360	Dasypus_novemcinctus
ENSSPAG00000013497	r3hcc1	88	47.403	ENSDORG00000026365	R3hcc1	95	31.712	Dipodomys_ordii
ENSSPAG00000013497	r3hcc1	98	32.273	ENSEASG00005018782	R3HCC1	76	32.265	Equus_asinus_asinus
ENSSPAG00000013497	r3hcc1	98	32.517	ENSECAG00000025013	R3HCC1	92	32.517	Equus_caballus
ENSSPAG00000013497	r3hcc1	97	32.648	ENSEEUG00000011918	R3HCC1	90	32.648	Erinaceus_europaeus
ENSSPAG00000013497	r3hcc1	96	48.193	ENSELUG00000023650	r3hcc1	99	48.193	Esox_lucius
ENSSPAG00000013497	r3hcc1	97	34.368	ENSFCAG00000012395	R3HCC1	90	32.644	Felis_catus
ENSSPAG00000013497	r3hcc1	67	46.154	ENSFDAG00000001572	R3HCC1	60	44.898	Fukomys_damarensis
ENSSPAG00000013497	r3hcc1	96	34.264	ENSGMOG00000017590	-	95	34.264	Gadus_morhua
ENSSPAG00000013497	r3hcc1	100	60.291	ENSGAFG00000008747	-	93	61.818	Gambusia_affinis
ENSSPAG00000013497	r3hcc1	98	58.231	ENSGACG00000008447	r3hcc1	93	58.231	Gasterosteus_aculeatus
ENSSPAG00000013497	r3hcc1	97	33.842	ENSGGOG00000013817	R3HCC1	93	34.171	Gorilla_gorilla
ENSSPAG00000013497	r3hcc1	81	61.728	ENSHBUG00000022250	-	98	62.705	Haplochromis_burtoni
ENSSPAG00000013497	r3hcc1	97	32.938	ENSHGLG00000010517	R3HCC1	86	32.938	Heterocephalus_glaber_female
ENSSPAG00000013497	r3hcc1	97	32.938	ENSHGLG00100006388	R3HCC1	86	32.938	Heterocephalus_glaber_male
ENSSPAG00000013497	r3hcc1	98	53.980	ENSHCOG00000011745	r3hcc1	91	54.015	Hippocampus_comes
ENSSPAG00000013497	r3hcc1	98	46.192	ENSIPUG00000024504	r3hcc1	85	48.250	Ictalurus_punctatus
ENSSPAG00000013497	r3hcc1	69	47.403	ENSSTOG00000027130	R3HCC1	61	47.403	Ictidomys_tridecemlineatus
ENSSPAG00000013497	r3hcc1	69	47.403	ENSJJAG00000013075	R3hcc1	94	33.933	Jaculus_jaculus
ENSSPAG00000013497	r3hcc1	96	60.152	ENSKMAG00000000286	r3hcc1	99	60.152	Kryptolebias_marmoratus
ENSSPAG00000013497	r3hcc1	99	36.156	ENSLACG00000011894	R3HCC1	96	36.156	Latimeria_chalumnae
ENSSPAG00000013497	r3hcc1	99	45.863	ENSLOCG00000015442	r3hcc1	99	44.254	Lepisosteus_oculatus
ENSSPAG00000013497	r3hcc1	98	32.083	ENSLAFG00000016137	R3HCC1	91	32.083	Loxodonta_africana
ENSSPAG00000013497	r3hcc1	97	32.719	ENSMFAG00000032894	R3HCC1	93	32.847	Macaca_fascicularis
ENSSPAG00000013497	r3hcc1	97	32.719	ENSMMUG00000016655	R3HCC1	93	33.090	Macaca_mulatta
ENSSPAG00000013497	r3hcc1	97	33.181	ENSMNEG00000043283	R3HCC1	93	33.090	Macaca_nemestrina
ENSSPAG00000013497	r3hcc1	97	32.802	ENSMLEG00000030147	R3HCC1	94	33.414	Mandrillus_leucophaeus
ENSSPAG00000013497	r3hcc1	96	66.253	ENSMAMG00000018146	r3hcc1	99	66.749	Mastacembelus_armatus
ENSSPAG00000013497	r3hcc1	97	34.129	ENSMGAG00000001356	R3HCC1	86	34.129	Meleagris_gallopavo
ENSSPAG00000013497	r3hcc1	66	48.592	ENSMAUG00000016096	R3hcc1	58	48.611	Mesocricetus_auratus
ENSSPAG00000013497	r3hcc1	97	33.933	ENSMICG00000011146	R3HCC1	93	34.474	Microcebus_murinus
ENSSPAG00000013497	r3hcc1	68	47.619	ENSMOCG00000018508	R3hcc1	57	47.619	Microtus_ochrogaster
ENSSPAG00000013497	r3hcc1	96	63.547	ENSMALG00000000731	r3hcc1	99	63.951	Monopterus_albus
ENSSPAG00000013497	r3hcc1	67	47.619	MGP_CAROLIEiJ_G0019467	R3hcc1	94	31.733	Mus_caroli
ENSSPAG00000013497	r3hcc1	87	47.020	ENSMUSG00000034194	R3hcc1	77	45.349	Mus_musculus
ENSSPAG00000013497	r3hcc1	68	47.333	MGP_PahariEiJ_G0030484	R3hcc1	60	45.294	Mus_pahari
ENSSPAG00000013497	r3hcc1	93	47.020	MGP_SPRETEiJ_G0020359	R3hcc1	82	45.349	Mus_spretus
ENSSPAG00000013497	r3hcc1	97	32.614	ENSMPUG00000003457	R3HCC1	82	33.257	Mustela_putorius_furo
ENSSPAG00000013497	r3hcc1	97	32.812	ENSMLUG00000000266	R3HCC1	86	33.259	Myotis_lucifugus
ENSSPAG00000013497	r3hcc1	83	89.655	ENSNBRG00000016975	-	79	89.655	Neolamprologus_brichardi
ENSSPAG00000013497	r3hcc1	89	31.127	ENSNLEG00000015944	R3HCC1	82	31.127	Nomascus_leucogenys
ENSSPAG00000013497	r3hcc1	98	34.670	ENSMEUG00000010587	R3HCC1	94	35.782	Notamacropus_eugenii
ENSSPAG00000013497	r3hcc1	97	32.407	ENSOPRG00000013390	R3HCC1	89	32.870	Ochotona_princeps
ENSSPAG00000013497	r3hcc1	98	31.702	ENSODEG00000007529	R3HCC1	95	31.702	Octodon_degus
ENSSPAG00000013497	r3hcc1	97	33.333	ENSOANG00000013877	R3HCC1	91	33.800	Ornithorhynchus_anatinus
ENSSPAG00000013497	r3hcc1	97	31.925	ENSOCUG00000023554	R3HCC1	80	31.455	Oryctolagus_cuniculus
ENSSPAG00000013497	r3hcc1	96	51.020	ENSORLG00000016816	r3hcc1	99	51.134	Oryzias_latipes
ENSSPAG00000013497	r3hcc1	96	50.765	ENSORLG00020012005	r3hcc1	99	50.882	Oryzias_latipes_hni
ENSSPAG00000013497	r3hcc1	96	51.786	ENSORLG00015007018	r3hcc1	99	51.889	Oryzias_latipes_hsok
ENSSPAG00000013497	r3hcc1	96	51.768	ENSOMEG00000000816	r3hcc1	99	51.768	Oryzias_melastigma
ENSSPAG00000013497	r3hcc1	97	33.333	ENSOGAG00000001291	R3HCC1	86	34.152	Otolemur_garnettii
ENSSPAG00000013497	r3hcc1	97	33.781	ENSOARG00000010146	R3HCC1	91	33.781	Ovis_aries
ENSSPAG00000013497	r3hcc1	97	32.311	ENSPPAG00000033165	R3HCC1	93	32.311	Pan_paniscus
ENSSPAG00000013497	r3hcc1	68	47.333	ENSPPRG00000002522	R3HCC1	94	33.577	Panthera_pardus
ENSSPAG00000013497	r3hcc1	63	47.333	ENSPTIG00000011230	R3HCC1	92	33.010	Panthera_tigris_altaica
ENSSPAG00000013497	r3hcc1	97	32.311	ENSPTRG00000020076	R3HCC1	93	32.311	Pan_troglodytes
ENSSPAG00000013497	r3hcc1	97	32.373	ENSPANG00000000453	R3HCC1	93	32.847	Papio_anubis
ENSSPAG00000013497	r3hcc1	93	46.457	ENSPKIG00000014426	-	95	46.457	Paramormyrops_kingsleyae
ENSSPAG00000013497	r3hcc1	93	47.680	ENSPKIG00000020397	-	95	47.680	Paramormyrops_kingsleyae
ENSSPAG00000013497	r3hcc1	97	37.081	ENSPSIG00000017664	R3HCC1	93	37.321	Pelodiscus_sinensis
ENSSPAG00000013497	r3hcc1	60	53.333	ENSPMGG00000007792	r3hcc1	97	35.981	Periophthalmus_magnuspinnatus
ENSSPAG00000013497	r3hcc1	66	49.296	ENSPEMG00000007118	R3hcc1	94	31.635	Peromyscus_maniculatus_bairdii
ENSSPAG00000013497	r3hcc1	92	33.584	ENSPCIG00000022718	-	83	33.668	Phascolarctos_cinereus
ENSSPAG00000013497	r3hcc1	100	59.036	ENSPFOG00000022301	r3hcc1	90	59.036	Poecilia_formosa
ENSSPAG00000013497	r3hcc1	100	59.036	ENSPLAG00000010794	r3hcc1	90	59.036	Poecilia_latipinna
ENSSPAG00000013497	r3hcc1	100	59.036	ENSPMEG00000022515	r3hcc1	90	59.036	Poecilia_mexicana
ENSSPAG00000013497	r3hcc1	100	59.135	ENSPREG00000000713	r3hcc1	90	59.135	Poecilia_reticulata
ENSSPAG00000013497	r3hcc1	91	32.401	ENSPPYG00000018436	R3HCC1	96	32.401	Pongo_abelii
ENSSPAG00000013497	r3hcc1	64	49.242	ENSPCAG00000012229	R3HCC1	58	49.242	Procavia_capensis
ENSSPAG00000013497	r3hcc1	97	33.487	ENSPCOG00000027554	R3HCC1	94	33.816	Propithecus_coquereli
ENSSPAG00000013497	r3hcc1	98	33.929	ENSPVAG00000009829	R3HCC1	91	33.482	Pteropus_vampyrus
ENSSPAG00000013497	r3hcc1	96	47.328	ENSPNAG00000023875	r3hcc1	98	48.232	Pygocentrus_nattereri
ENSSPAG00000013497	r3hcc1	68	48.299	ENSRNOG00000016777	AABR07018321.1	77	31.027	Rattus_norvegicus
ENSSPAG00000013497	r3hcc1	97	31.858	ENSRBIG00000028045	R3HCC1	93	32.603	Rhinopithecus_bieti
ENSSPAG00000013497	r3hcc1	97	31.858	ENSRROG00000031126	R3HCC1	93	32.603	Rhinopithecus_roxellana
ENSSPAG00000013497	r3hcc1	98	31.742	ENSSBOG00000022590	R3HCC1	94	31.742	Saimiri_boliviensis_boliviensis
ENSSPAG00000013497	r3hcc1	96	45.137	ENSSFOG00015013507	r3hcc1	100	45.137	Scleropages_formosus
ENSSPAG00000013497	r3hcc1	96	67.079	ENSSMAG00000008647	r3hcc1	99	67.079	Scophthalmus_maximus
ENSSPAG00000013497	r3hcc1	100	68.735	ENSSDUG00000022786	r3hcc1	97	69.928	Seriola_dumerili
ENSSPAG00000013497	r3hcc1	100	69.212	ENSSLDG00000019031	r3hcc1	97	70.883	Seriola_lalandi_dorsalis
ENSSPAG00000013497	r3hcc1	97	32.373	ENSSSCG00000039915	-	89	32.710	Sus_scrofa
ENSSPAG00000013497	r3hcc1	68	42.953	ENSSSCG00000037347	-	54	42.953	Sus_scrofa
ENSSPAG00000013497	r3hcc1	99	52.300	ENSTRUG00000015880	r3hcc1	99	52.300	Takifugu_rubripes
ENSSPAG00000013497	r3hcc1	98	31.991	ENSTTRG00000012247	R3HCC1	90	31.910	Tursiops_truncatus
ENSSPAG00000013497	r3hcc1	68	46.667	ENSUAMG00000007344	R3HCC1	93	33.179	Ursus_americanus
ENSSPAG00000013497	r3hcc1	98	31.868	ENSVVUG00000005056	R3HCC1	89	33.181	Vulpes_vulpes
ENSSPAG00000013497	r3hcc1	93	56.658	ENSXCOG00000017626	r3hcc1	86	58.098	Xiphophorus_couchianus
ENSSPAG00000013497	r3hcc1	100	58.537	ENSXMAG00000018375	r3hcc1	93	61.082	Xiphophorus_maculatus