EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000013533 (Gene tree)
Gene ID: 103361823
Gene Symbol: zgc:171927
Alias: -
Full Name: ras-related protein Rab-1B-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 4140 bases
Position: chrKK580608.1:305384-309523
Accession: 103361823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000017910	MMR_HSR1	PF01926.23	7.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000018187	-	645	XM_008288016	ENSSPAP00000017910	214 (aa)	XP_008286238	UPI0004978781

Gene Model

Click here to download ENSSPAG00000013533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000013533's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000013533	zgc:171927	79	51.786	ENSSPAG00000014559	-	77	51.786
ENSSPAG00000013533	zgc:171927	98	44.286	ENSSPAG00000015817	rab25a	96	44.286
ENSSPAG00000013533	zgc:171927	75	50.000	ENSSPAG00000020875	rab18b	79	50.000
ENSSPAG00000013533	zgc:171927	81	40.341	ENSSPAG00000021333	rab22a	89	40.341
ENSSPAG00000013533	zgc:171927	76	45.399	ENSSPAG00000006436	rab5c	81	43.017
ENSSPAG00000013533	zgc:171927	84	32.597	ENSSPAG00000005867	rheb	93	32.597
ENSSPAG00000013533	zgc:171927	80	46.512	ENSSPAG00000010822	rab12	71	46.512
ENSSPAG00000013533	zgc:171927	80	58.140	ENSSPAG00000022440	-	86	58.140
ENSSPAG00000013533	zgc:171927	77	38.788	ENSSPAG00000009928	kras	91	38.150
ENSSPAG00000013533	zgc:171927	98	43.333	ENSSPAG00000012060	rab25b	98	43.478
ENSSPAG00000013533	zgc:171927	55	32.203	ENSSPAG00000015869	arl8a	61	32.203
ENSSPAG00000013533	zgc:171927	97	42.381	ENSSPAG00000023185	RAB15	99	42.381
ENSSPAG00000013533	zgc:171927	79	43.275	ENSSPAG00000010919	-	80	43.275
ENSSPAG00000013533	zgc:171927	96	34.762	ENSSPAG00000009806	rab9b	89	34.762
ENSSPAG00000013533	zgc:171927	80	45.810	ENSSPAG00000006404	zgc:101559	76	45.810
ENSSPAG00000013533	zgc:171927	79	32.353	ENSSPAG00000012674	rhebl1	90	32.353
ENSSPAG00000013533	zgc:171927	82	42.938	ENSSPAG00000010771	RAB39B	83	42.938
ENSSPAG00000013533	zgc:171927	80	38.372	ENSSPAG00000022624	-	76	38.372
ENSSPAG00000013533	zgc:171927	71	32.895	ENSSPAG00000015015	rras2	81	33.537
ENSSPAG00000013533	zgc:171927	77	39.053	ENSSPAG00000023345	RAB7A	82	39.053
ENSSPAG00000013533	zgc:171927	77	41.520	ENSSPAG00000010224	-	77	41.520
ENSSPAG00000013533	zgc:171927	79	50.296	ENSSPAG00000015211	rab15	79	50.296
ENSSPAG00000013533	zgc:171927	76	65.432	ENSSPAG00000008400	rab35b	80	65.432
ENSSPAG00000013533	zgc:171927	91	41.294	ENSSPAG00000005141	-	93	41.294
ENSSPAG00000013533	zgc:171927	99	45.327	ENSSPAG00000012044	rab11al	96	45.327
ENSSPAG00000013533	zgc:171927	100	71.963	ENSSPAG00000022676	rab1ba	100	71.963
ENSSPAG00000013533	zgc:171927	78	53.012	ENSSPAG00000013422	rab30	82	53.012
ENSSPAG00000013533	zgc:171927	96	36.058	ENSSPAG00000018203	rab36	78	36.058
ENSSPAG00000013533	zgc:171927	76	42.515	ENSSPAG00000005785	rab33a	73	42.515
ENSSPAG00000013533	zgc:171927	92	75.635	ENSSPAG00000012564	-	98	75.635
ENSSPAG00000013533	zgc:171927	77	33.529	ENSSPAG00000002062	RAB29	82	33.529
ENSSPAG00000013533	zgc:171927	75	39.752	ENSSPAG00000017366	rab6ba	77	39.752
ENSSPAG00000013533	zgc:171927	76	54.938	ENSSPAG00000019393	RAB11A	80	54.938
ENSSPAG00000013533	zgc:171927	80	42.286	ENSSPAG00000012955	si:dkey-34d22.5	79	42.286
ENSSPAG00000013533	zgc:171927	79	30.556	ENSSPAG00000014922	rasl11b	73	30.387
ENSSPAG00000013533	zgc:171927	76	36.364	ENSSPAG00000004878	rras	83	35.366
ENSSPAG00000013533	zgc:171927	91	41.791	ENSSPAG00000022927	rab14	93	41.791
ENSSPAG00000013533	zgc:171927	74	40.373	ENSSPAG00000002801	rab34b	63	40.373
ENSSPAG00000013533	zgc:171927	79	37.931	ENSSPAG00000009276	rab6bb	92	37.931
ENSSPAG00000013533	zgc:171927	87	37.968	ENSSPAG00000001067	-	85	37.968
ENSSPAG00000013533	zgc:171927	55	35.593	ENSSPAG00000002659	RAP2B	96	36.154
ENSSPAG00000013533	zgc:171927	54	31.967	ENSSPAG00000017484	-	65	32.203
ENSSPAG00000013533	zgc:171927	79	51.786	ENSSPAG00000011419	rab11bb	77	51.786
ENSSPAG00000013533	zgc:171927	79	51.786	ENSSPAG00000017313	rab11ba	77	51.786
ENSSPAG00000013533	zgc:171927	87	42.328	ENSSPAG00000016167	rab42a	86	42.328
ENSSPAG00000013533	zgc:171927	79	33.526	ENSSPAG00000018992	si:cabz01085950.1	85	33.526
ENSSPAG00000013533	zgc:171927	79	42.308	ENSSPAG00000004801	rab33ba	76	42.308
ENSSPAG00000013533	zgc:171927	55	30.508	ENSSPAG00000020792	arl8bb	64	30.508
ENSSPAG00000013533	zgc:171927	72	37.736	ENSSPAG00000011224	-	73	37.736
ENSSPAG00000013533	zgc:171927	97	33.175	ENSSPAG00000007900	rab9a	95	33.175
ENSSPAG00000013533	zgc:171927	74	39.130	ENSSPAG00000017348	rab34a	61	39.130
ENSSPAG00000013533	zgc:171927	81	45.977	ENSSPAG00000015678	rab5aa	81	45.977
ENSSPAG00000013533	zgc:171927	78	60.241	ENSSPAG00000006302	si:dkey-16l2.16	79	59.880
ENSSPAG00000013533	zgc:171927	87	37.755	ENSSPAG00000001423	-	95	37.755
ENSSPAG00000013533	zgc:171927	73	37.975	ENSSPAG00000010373	rab23	87	35.955
ENSSPAG00000013533	zgc:171927	76	37.195	ENSSPAG00000007357	hrasb	86	37.195
ENSSPAG00000013533	zgc:171927	84	82.418	ENSSPAG00000015564	rab1ab	80	82.418
ENSSPAG00000013533	zgc:171927	82	38.068	ENSSPAG00000006001	rab41	80	38.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000013533	zgc:171927	100	99.065	ENSAPOG00000004980	-	100	99.065	Acanthochromis_polyacanthus
ENSSPAG00000013533	zgc:171927	100	94.860	ENSACIG00000009006	zgc:171927	100	94.860	Amphilophus_citrinellus
ENSSPAG00000013533	zgc:171927	100	96.729	ENSAOCG00000024149	-	100	96.729	Amphiprion_ocellaris
ENSSPAG00000013533	zgc:171927	71	89.677	ENSAOCG00000013808	-	93	98.347	Amphiprion_ocellaris
ENSSPAG00000013533	zgc:171927	100	97.196	ENSAPEG00000022171	zgc:171927	99	97.196	Amphiprion_percula
ENSSPAG00000013533	zgc:171927	100	95.794	ENSATEG00000003430	zgc:171927	100	95.794	Anabas_testudineus
ENSSPAG00000013533	zgc:171927	100	94.393	ENSACLG00000013734	-	100	94.393	Astatotilapia_calliptera
ENSSPAG00000013533	zgc:171927	100	80.000	ENSAMXG00000039486	zgc:171927	100	80.000	Astyanax_mexicanus
ENSSPAG00000013533	zgc:171927	100	90.654	ENSCSEG00000014416	zgc:171927	100	90.654	Cynoglossus_semilaevis
ENSSPAG00000013533	zgc:171927	100	92.991	ENSCVAG00000009222	zgc:171927	100	92.991	Cyprinodon_variegatus
ENSSPAG00000013533	zgc:171927	100	78.605	ENSDARG00000033056	zgc:171927	100	78.605	Danio_rerio
ENSSPAG00000013533	zgc:171927	94	82.178	ENSELUG00000011680	zgc:171927	100	78.704	Esox_lucius
ENSSPAG00000013533	zgc:171927	100	92.991	ENSFHEG00000022176	zgc:171927	100	92.991	Fundulus_heteroclitus
ENSSPAG00000013533	zgc:171927	98	80.569	ENSGMOG00000004979	-	97	80.569	Gadus_morhua
ENSSPAG00000013533	zgc:171927	98	92.344	ENSGAFG00000015702	zgc:171927	84	92.344	Gambusia_affinis
ENSSPAG00000013533	zgc:171927	100	94.393	ENSGACG00000013401	zgc:171927	99	94.393	Gasterosteus_aculeatus
ENSSPAG00000013533	zgc:171927	100	94.393	ENSHBUG00000002397	-	100	94.393	Haplochromis_burtoni
ENSSPAG00000013533	zgc:171927	100	92.523	ENSKMAG00000009856	zgc:171927	100	92.523	Kryptolebias_marmoratus
ENSSPAG00000013533	zgc:171927	98	91.866	ENSLBEG00000027226	-	89	91.866	Labrus_bergylta
ENSSPAG00000013533	zgc:171927	100	92.523	ENSLBEG00000005791	-	100	92.523	Labrus_bergylta
ENSSPAG00000013533	zgc:171927	98	72.381	ENSLOCG00000014692	zgc:171927	96	72.381	Lepisosteus_oculatus
ENSSPAG00000013533	zgc:171927	100	93.925	ENSMAMG00000020135	zgc:171927	100	93.925	Mastacembelus_armatus
ENSSPAG00000013533	zgc:171927	100	94.393	ENSMZEG00005024685	-	100	94.393	Maylandia_zebra
ENSSPAG00000013533	zgc:171927	100	89.720	ENSMMOG00000009833	-	100	89.720	Mola_mola
ENSSPAG00000013533	zgc:171927	100	92.991	ENSMALG00000021129	zgc:171927	100	92.991	Monopterus_albus
ENSSPAG00000013533	zgc:171927	100	93.925	ENSNBRG00000006202	zgc:171927	100	93.925	Neolamprologus_brichardi
ENSSPAG00000013533	zgc:171927	100	92.523	ENSORLG00000000602	zgc:171927	100	92.523	Oryzias_latipes
ENSSPAG00000013533	zgc:171927	100	92.523	ENSORLG00020021071	zgc:171927	100	92.523	Oryzias_latipes_hni
ENSSPAG00000013533	zgc:171927	100	92.991	ENSORLG00015010098	zgc:171927	100	92.991	Oryzias_latipes_hsok
ENSSPAG00000013533	zgc:171927	100	92.991	ENSOMEG00000020594	zgc:171927	100	92.991	Oryzias_melastigma
ENSSPAG00000013533	zgc:171927	100	93.458	ENSPFOG00000013810	zgc:171927	99	93.458	Poecilia_formosa
ENSSPAG00000013533	zgc:171927	100	92.523	ENSPLAG00000005869	zgc:171927	100	92.523	Poecilia_latipinna
ENSSPAG00000013533	zgc:171927	100	93.458	ENSPMEG00000022350	zgc:171927	100	93.458	Poecilia_mexicana
ENSSPAG00000013533	zgc:171927	100	93.458	ENSPREG00000017517	zgc:171927	100	93.458	Poecilia_reticulata
ENSSPAG00000013533	zgc:171927	100	94.393	ENSPNYG00000007520	-	100	94.393	Pundamilia_nyererei
ENSSPAG00000013533	zgc:171927	100	80.000	ENSPNAG00000029574	zgc:171927	100	80.000	Pygocentrus_nattereri
ENSSPAG00000013533	zgc:171927	100	79.070	ENSSFOG00015005464	zgc:171927	99	79.070	Scleropages_formosus
ENSSPAG00000013533	zgc:171927	100	91.589	ENSSMAG00000004416	-	100	91.589	Scophthalmus_maximus
ENSSPAG00000013533	zgc:171927	100	96.262	ENSSDUG00000004445	zgc:171927	100	96.262	Seriola_dumerili
ENSSPAG00000013533	zgc:171927	100	96.262	ENSSLDG00000018024	zgc:171927	100	96.262	Seriola_lalandi_dorsalis
ENSSPAG00000013533	zgc:171927	100	93.925	ENSXCOG00000010695	zgc:171927	100	93.925	Xiphophorus_couchianus
ENSSPAG00000013533	zgc:171927	100	93.925	ENSXMAG00000004683	zgc:171927	100	93.925	Xiphophorus_maculatus