EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000013694 (Gene tree)
Gene ID: 103361356
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 45208 bases
Position: chrKK580570.1:124889-170096
Accession: 103361356
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000018312	ResIII	PF04851.15	9.5e-08	1	1
ENSSPAP00000018183	ResIII	PF04851.15	6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000018420	-	8427	XM_008287408	ENSSPAP00000018141	2054 (aa)	XP_008285630	-
ENSSPAT00000018461	-	11293	XM_008287411	ENSSPAP00000018183	2109 (aa)	XP_008285633	-
ENSSPAT00000018590	-	4743	-	ENSSPAP00000018312	1580 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000013694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000013694's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000013694	chd3	97	77.487	ENSSPAG00000018749	-	96	70.989
ENSSPAG00000013694	chd3	99	68.495	ENSSPAG00000013983	chd4a	93	71.545

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000013694	chd3	98	81.053	ENSG00000170004	CHD3	91	80.756	Homo_sapiens
ENSSPAG00000013694	chd3	99	92.179	ENSAPOG00000005614	chd3	94	98.947	Acanthochromis_polyacanthus
ENSSPAG00000013694	chd3	69	85.185	ENSAMEG00000003025	-	80	85.185	Ailuropoda_melanoleuca
ENSSPAG00000013694	chd3	99	94.707	ENSACIG00000019671	chd3	99	97.838	Amphilophus_citrinellus
ENSSPAG00000013694	chd3	99	98.936	ENSAOCG00000023784	chd3	99	97.538	Amphiprion_ocellaris
ENSSPAG00000013694	chd3	99	98.936	ENSAPEG00000006341	chd3	99	97.633	Amphiprion_percula
ENSSPAG00000013694	chd3	99	95.213	ENSATEG00000000848	chd3	99	93.259	Anabas_testudineus
ENSSPAG00000013694	chd3	99	77.869	ENSACAG00000004276	CHD3	92	75.268	Anolis_carolinensis
ENSSPAG00000013694	chd3	98	81.053	ENSANAG00000034323	CHD3	88	80.756	Aotus_nancymaae
ENSSPAG00000013694	chd3	99	90.625	ENSACLG00000009222	chd3	98	91.460	Astatotilapia_calliptera
ENSSPAG00000013694	chd3	98	80.331	ENSBTAG00000014377	CHD3	80	79.986	Bos_taurus
ENSSPAG00000013694	chd3	98	81.053	ENSCJAG00000014766	CHD3	91	80.756	Callithrix_jacchus
ENSSPAG00000013694	chd3	98	81.383	ENSCAFG00000016859	CHD3	79	81.383	Canis_familiaris
ENSSPAG00000013694	chd3	98	81.383	ENSCAFG00020007422	CHD3	93	80.969	Canis_lupus_dingo
ENSSPAG00000013694	chd3	98	81.053	ENSCHIG00000016737	CHD3	79	81.053	Capra_hircus
ENSSPAG00000013694	chd3	97	87.209	ENSTSYG00000035658	CHD3	84	87.209	Carlito_syrichta
ENSSPAG00000013694	chd3	99	80.928	ENSCAPG00000014864	CHD3	89	79.798	Cavia_aperea
ENSSPAG00000013694	chd3	99	80.928	ENSCPOG00000022653	CHD3	80	80.928	Cavia_porcellus
ENSSPAG00000013694	chd3	98	81.053	ENSCCAG00000034792	CHD3	88	80.756	Cebus_capucinus
ENSSPAG00000013694	chd3	99	80.101	ENSCATG00000041717	CHD3	94	77.379	Cercocebus_atys
ENSSPAG00000013694	chd3	99	78.352	ENSCLAG00000010523	CHD3	92	80.412	Chinchilla_lanigera
ENSSPAG00000013694	chd3	98	81.053	ENSCSAG00000011122	CHD3	81	81.053	Chlorocebus_sabaeus
ENSSPAG00000013694	chd3	99	79.098	ENSCPBG00000011966	CHD3	97	93.197	Chrysemys_picta_bellii
ENSSPAG00000013694	chd3	98	81.053	ENSCANG00000037641	CHD3	94	77.379	Colobus_angolensis_palliatus
ENSSPAG00000013694	chd3	97	81.443	ENSCGRG00001011306	Chd3	92	80.205	Cricetulus_griseus_chok1gshd
ENSSPAG00000013694	chd3	87	78.459	ENSCGRG00000007878	Chd3	90	76.858	Cricetulus_griseus_crigri
ENSSPAG00000013694	chd3	99	87.679	ENSCSEG00000004489	chd3	98	91.336	Cynoglossus_semilaevis
ENSSPAG00000013694	chd3	99	93.684	ENSCVAG00000007293	chd3	95	95.102	Cyprinodon_variegatus
ENSSPAG00000013694	chd3	99	84.897	ENSDARG00000021405	chd3	95	90.357	Danio_rerio
ENSSPAG00000013694	chd3	88	86.032	ENSDNOG00000047846	CHD3	71	86.032	Dasypus_novemcinctus
ENSSPAG00000013694	chd3	98	81.053	ENSDORG00000010713	Chd3	92	80.412	Dipodomys_ordii
ENSSPAG00000013694	chd3	99	74.515	ENSETEG00000017733	CHD3	93	78.451	Echinops_telfairi
ENSSPAG00000013694	chd3	77	86.709	ENSEBUG00000008310	chd3	98	67.802	Eptatretus_burgeri
ENSSPAG00000013694	chd3	97	80.412	ENSEASG00005019360	CHD3	86	80.412	Equus_asinus_asinus
ENSSPAG00000013694	chd3	97	80.412	ENSECAG00000010051	CHD3	86	80.412	Equus_caballus
ENSSPAG00000013694	chd3	92	90.722	ENSEEUG00000015205	CHD3	81	90.722	Erinaceus_europaeus
ENSSPAG00000013694	chd3	99	82.284	ENSELUG00000019499	chd3	99	97.279	Esox_lucius
ENSSPAG00000013694	chd3	97	80.244	ENSFCAG00000009629	CHD3	77	79.541	Felis_catus
ENSSPAG00000013694	chd3	99	80.928	ENSFDAG00000008220	CHD3	81	80.928	Fukomys_damarensis
ENSSPAG00000013694	chd3	98	91.534	ENSGMOG00000013599	chd3	90	87.273	Gadus_morhua
ENSSPAG00000013694	chd3	67	90.781	ENSGAFG00000004055	chd3	99	89.915	Gambusia_affinis
ENSSPAG00000013694	chd3	99	93.617	ENSGACG00000019275	chd3	97	82.391	Gasterosteus_aculeatus
ENSSPAG00000013694	chd3	86	82.353	ENSGAGG00000013164	CHD3	98	76.952	Gopherus_agassizii
ENSSPAG00000013694	chd3	98	81.053	ENSGGOG00000013496	CHD3	91	80.756	Gorilla_gorilla
ENSSPAG00000013694	chd3	99	80.928	ENSHGLG00000012017	CHD3	88	80.756	Heterocephalus_glaber_female
ENSSPAG00000013694	chd3	82	78.472	ENSHGLG00100013902	CHD3	91	85.000	Heterocephalus_glaber_male
ENSSPAG00000013694	chd3	99	92.553	ENSHCOG00000010170	chd3	97	87.172	Hippocampus_comes
ENSSPAG00000013694	chd3	99	83.467	ENSIPUG00000003271	chd3	93	87.074	Ictalurus_punctatus
ENSSPAG00000013694	chd3	97	81.250	ENSSTOG00000025907	CHD3	92	80.412	Ictidomys_tridecemlineatus
ENSSPAG00000013694	chd3	99	80.115	ENSJJAG00000017633	Chd3	92	80.756	Jaculus_jaculus
ENSSPAG00000013694	chd3	95	97.959	ENSKMAG00000019292	chd3	94	98.500	Kryptolebias_marmoratus
ENSSPAG00000013694	chd3	99	86.241	ENSLBEG00000028485	chd3	93	95.935	Labrus_bergylta
ENSSPAG00000013694	chd3	99	75.581	ENSLACG00000008031	CHD3	96	71.087	Latimeria_chalumnae
ENSSPAG00000013694	chd3	99	85.022	ENSLOCG00000013965	chd3	97	80.347	Lepisosteus_oculatus
ENSSPAG00000013694	chd3	97	87.209	ENSLAFG00000000572	CHD3	89	82.516	Loxodonta_africana
ENSSPAG00000013694	chd3	99	80.043	ENSMFAG00000020113	CHD3	94	77.379	Macaca_fascicularis
ENSSPAG00000013694	chd3	99	78.566	ENSMMUG00000022221	CHD3	89	80.135	Macaca_mulatta
ENSSPAG00000013694	chd3	99	80.043	ENSMNEG00000001728	CHD3	94	77.379	Macaca_nemestrina
ENSSPAG00000013694	chd3	99	80.043	ENSMLEG00000032249	CHD3	94	77.379	Mandrillus_leucophaeus
ENSSPAG00000013694	chd3	99	91.381	ENSMAMG00000000564	chd3	95	97.368	Mastacembelus_armatus
ENSSPAG00000013694	chd3	97	81.443	ENSMAUG00000013873	Chd3	89	80.205	Mesocricetus_auratus
ENSSPAG00000013694	chd3	97	87.209	ENSMICG00000008741	CHD3	88	79.725	Microcebus_murinus
ENSSPAG00000013694	chd3	97	81.443	ENSMOCG00000004848	Chd3	93	79.863	Microtus_ochrogaster
ENSSPAG00000013694	chd3	98	91.393	ENSMMOG00000012699	chd3	98	86.486	Mola_mola
ENSSPAG00000013694	chd3	99	76.193	ENSMODG00000007509	CHD3	94	80.070	Monodelphis_domestica
ENSSPAG00000013694	chd3	97	81.443	MGP_CAROLIEiJ_G0016564	Chd3	99	76.793	Mus_caroli
ENSSPAG00000013694	chd3	97	81.443	ENSMUSG00000018474	Chd3	95	80.205	Mus_musculus
ENSSPAG00000013694	chd3	97	81.443	MGP_PahariEiJ_G0017695	Chd3	95	80.205	Mus_pahari
ENSSPAG00000013694	chd3	97	81.443	MGP_SPRETEiJ_G0017400	Chd3	95	80.205	Mus_spretus
ENSSPAG00000013694	chd3	92	81.260	ENSMPUG00000008861	CHD3	85	80.915	Mustela_putorius_furo
ENSSPAG00000013694	chd3	97	82.514	ENSMLUG00000014643	-	78	82.514	Myotis_lucifugus
ENSSPAG00000013694	chd3	99	79.885	ENSNGAG00000000773	Chd3	79	80.928	Nannospalax_galili
ENSSPAG00000013694	chd3	99	88.759	ENSNBRG00000000636	chd3	97	88.821	Neolamprologus_brichardi
ENSSPAG00000013694	chd3	95	89.189	ENSNLEG00000009770	CHD3	91	83.071	Nomascus_leucogenys
ENSSPAG00000013694	chd3	88	80.000	ENSMEUG00000005852	CHD3	84	80.068	Notamacropus_eugenii
ENSSPAG00000013694	chd3	99	79.239	ENSOPRG00000011069	CHD3	85	79.897	Ochotona_princeps
ENSSPAG00000013694	chd3	99	78.352	ENSODEG00000017785	CHD3	80	87.209	Octodon_degus
ENSSPAG00000013694	chd3	98	97.382	ENSONIG00000009292	chd3	99	91.908	Oreochromis_niloticus
ENSSPAG00000013694	chd3	97	77.397	ENSOCUG00000029299	CHD3	91	75.943	Oryctolagus_cuniculus
ENSSPAG00000013694	chd3	89	84.345	ENSORLG00000007107	chd3	93	89.718	Oryzias_latipes
ENSSPAG00000013694	chd3	64	90.448	ENSORLG00020008387	chd3	95	88.800	Oryzias_latipes_hni
ENSSPAG00000013694	chd3	98	94.764	ENSOMEG00000013691	chd3	99	88.896	Oryzias_melastigma
ENSSPAG00000013694	chd3	97	87.209	ENSOGAG00000003216	CHD3	80	87.209	Otolemur_garnettii
ENSSPAG00000013694	chd3	98	79.622	ENSOARG00000017855	CHD3	78	79.185	Ovis_aries
ENSSPAG00000013694	chd3	98	81.053	ENSPPAG00000032886	CHD3	91	78.788	Pan_paniscus
ENSSPAG00000013694	chd3	97	80.187	ENSPPRG00000000626	CHD3	91	80.069	Panthera_pardus
ENSSPAG00000013694	chd3	98	81.053	ENSPTRG00000008714	CHD3	91	80.756	Pan_troglodytes
ENSSPAG00000013694	chd3	99	80.043	ENSPANG00000023938	CHD3	87	81.053	Papio_anubis
ENSSPAG00000013694	chd3	98	93.085	ENSPKIG00000006305	chd3	94	90.592	Paramormyrops_kingsleyae
ENSSPAG00000013694	chd3	67	82.445	ENSPSIG00000010177	CHD3	97	82.532	Pelodiscus_sinensis
ENSSPAG00000013694	chd3	97	81.443	ENSPEMG00000014262	Chd3	80	81.443	Peromyscus_maniculatus_bairdii
ENSSPAG00000013694	chd3	95	90.541	ENSPCIG00000005442	CHD3	90	90.955	Phascolarctos_cinereus
ENSSPAG00000013694	chd3	98	94.764	ENSPFOG00000012464	chd3	98	91.643	Poecilia_formosa
ENSSPAG00000013694	chd3	99	84.550	ENSPLAG00000002887	chd3	97	94.779	Poecilia_latipinna
ENSSPAG00000013694	chd3	59	100.000	ENSPMEG00000016725	chd3	95	87.748	Poecilia_mexicana
ENSSPAG00000013694	chd3	99	91.508	ENSPREG00000011044	chd3	97	94.845	Poecilia_reticulata
ENSSPAG00000013694	chd3	97	82.967	ENSPPYG00000007940	CHD3	81	82.967	Pongo_abelii
ENSSPAG00000013694	chd3	94	84.951	ENSPCAG00000004350	CHD3	76	87.209	Procavia_capensis
ENSSPAG00000013694	chd3	98	80.115	ENSPCOG00000020952	CHD3	89	80.069	Propithecus_coquereli
ENSSPAG00000013694	chd3	81	80.412	ENSPVAG00000016344	CHD3	67	80.412	Pteropus_vampyrus
ENSSPAG00000013694	chd3	98	94.681	ENSPNAG00000020393	chd3	98	93.286	Pygocentrus_nattereri
ENSSPAG00000013694	chd3	97	81.443	ENSRNOG00000009722	Chd3	86	81.443	Rattus_norvegicus
ENSSPAG00000013694	chd3	98	81.053	ENSRBIG00000033562	CHD3	87	81.053	Rhinopithecus_bieti
ENSSPAG00000013694	chd3	99	78.107	ENSRROG00000029554	CHD3	94	77.379	Rhinopithecus_roxellana
ENSSPAG00000013694	chd3	98	81.053	ENSSBOG00000020719	CHD3	91	80.756	Saimiri_boliviensis_boliviensis
ENSSPAG00000013694	chd3	99	76.190	ENSSHAG00000014412	CHD3	93	80.137	Sarcophilus_harrisii
ENSSPAG00000013694	chd3	94	83.227	ENSSFOG00015023123	chd3	95	88.594	Scleropages_formosus
ENSSPAG00000013694	chd3	99	97.872	ENSSMAG00000006451	chd3	97	94.245	Scophthalmus_maximus
ENSSPAG00000013694	chd3	62	92.000	ENSSDUG00000005792	chd3	96	90.917	Seriola_dumerili
ENSSPAG00000013694	chd3	99	78.894	ENSSSCG00000021363	CHD3	90	90.854	Sus_scrofa
ENSSPAG00000013694	chd3	86	89.265	ENSTRUG00000014990	chd3	89	91.661	Takifugu_rubripes
ENSSPAG00000013694	chd3	99	95.213	ENSTNIG00000012998	chd3	97	91.176	Tetraodon_nigroviridis
ENSSPAG00000013694	chd3	75	79.130	ENSTBEG00000011454	-	69	90.722	Tupaia_belangeri
ENSSPAG00000013694	chd3	96	82.425	ENSTTRG00000010295	CHD3	77	82.513	Tursiops_truncatus
ENSSPAG00000013694	chd3	97	86.705	ENSUAMG00000005475	CHD3	95	83.830	Ursus_americanus
ENSSPAG00000013694	chd3	57	90.093	ENSVPAG00000010794	-	59	96.078	Vicugna_pacos
ENSSPAG00000013694	chd3	98	81.383	ENSVVUG00000028011	CHD3	86	84.016	Vulpes_vulpes
ENSSPAG00000013694	chd3	99	71.197	ENSXETG00000012991	chd3	79	82.143	Xenopus_tropicalis
ENSSPAG00000013694	chd3	61	92.117	ENSXCOG00000000809	chd3	97	92.067	Xiphophorus_couchianus
ENSSPAG00000013694	chd3	99	91.757	ENSXMAG00000016035	chd3	99	95.652	Xiphophorus_maculatus