EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000013724 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 13091 bases
Position: chrKK580240.1:408764-421854
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000018189	zf-met	PF12874.7	5.3e-15	1	2
ENSSPAP00000018189	zf-met	PF12874.7	5.3e-15	2	2
ENSSPAP00000018189	zf-C2H2_jaz	PF12171.8	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000018465	-	381	-	ENSSPAP00000018189	126 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000013724's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000013724's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000013724	zgc:171482	94	71.795	ENSSPAG00000021408	zmat4a	62	71.795

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000013724	zgc:171482	98	99.194	ENSAPOG00000019970	zgc:171482	79	99.194	Acanthochromis_polyacanthus
ENSSPAG00000013724	zgc:171482	93	100.000	ENSACIG00000021512	zgc:171482	87	100.000	Amphilophus_citrinellus
ENSSPAG00000013724	zgc:171482	100	96.032	ENSAOCG00000000751	zgc:171482	93	96.032	Amphiprion_ocellaris
ENSSPAG00000013724	zgc:171482	98	97.581	ENSAPEG00000014154	zgc:171482	89	97.581	Amphiprion_percula
ENSSPAG00000013724	zgc:171482	93	98.291	ENSATEG00000001371	zgc:171482	79	98.291	Anabas_testudineus
ENSSPAG00000013724	zgc:171482	98	96.774	ENSACLG00000010511	zgc:171482	86	96.774	Astatotilapia_calliptera
ENSSPAG00000013724	zgc:171482	93	93.162	ENSAMXG00000002299	zgc:171482	89	93.162	Astyanax_mexicanus
ENSSPAG00000013724	zgc:171482	94	94.958	ENSCSEG00000006509	zgc:171482	78	94.958	Cynoglossus_semilaevis
ENSSPAG00000013724	zgc:171482	94	98.319	ENSCVAG00000013606	zgc:171482	80	98.319	Cyprinodon_variegatus
ENSSPAG00000013724	zgc:171482	100	86.719	ENSDARG00000074415	zgc:171482	96	86.719	Danio_rerio
ENSSPAG00000013724	zgc:171482	98	93.496	ENSELUG00000021817	zgc:171482	88	93.496	Esox_lucius
ENSSPAG00000013724	zgc:171482	98	68.800	ENSELUG00000017517	-	60	84.444	Esox_lucius
ENSSPAG00000013724	zgc:171482	98	96.774	ENSFHEG00000002233	zgc:171482	89	96.774	Fundulus_heteroclitus
ENSSPAG00000013724	zgc:171482	98	94.355	ENSGMOG00000010508	zgc:171482	79	94.355	Gadus_morhua
ENSSPAG00000013724	zgc:171482	94	99.160	ENSGAFG00000009398	zgc:171482	78	99.160	Gambusia_affinis
ENSSPAG00000013724	zgc:171482	100	94.444	ENSGACG00000007680	zgc:171482	80	94.444	Gasterosteus_aculeatus
ENSSPAG00000013724	zgc:171482	98	96.774	ENSHBUG00000023289	zgc:171482	93	96.774	Haplochromis_burtoni
ENSSPAG00000013724	zgc:171482	100	88.281	ENSHCOG00000018086	zgc:171482	96	88.281	Hippocampus_comes
ENSSPAG00000013724	zgc:171482	100	90.476	ENSIPUG00000000361	zgc:171482	88	90.476	Ictalurus_punctatus
ENSSPAG00000013724	zgc:171482	98	95.968	ENSKMAG00000005077	zgc:171482	68	95.968	Kryptolebias_marmoratus
ENSSPAG00000013724	zgc:171482	98	96.774	ENSLBEG00000023823	zgc:171482	89	96.774	Labrus_bergylta
ENSSPAG00000013724	zgc:171482	96	90.909	ENSLOCG00000008863	zgc:171482	77	90.909	Lepisosteus_oculatus
ENSSPAG00000013724	zgc:171482	100	96.032	ENSMAMG00000001031	zgc:171482	78	97.581	Mastacembelus_armatus
ENSSPAG00000013724	zgc:171482	94	91.597	ENSMZEG00005027721	zgc:171482	79	91.597	Maylandia_zebra
ENSSPAG00000013724	zgc:171482	98	98.387	ENSMMOG00000010523	zgc:171482	95	98.387	Mola_mola
ENSSPAG00000013724	zgc:171482	98	97.561	ENSMALG00000017883	zgc:171482	80	97.561	Monopterus_albus
ENSSPAG00000013724	zgc:171482	96	95.041	ENSNBRG00000021035	zgc:171482	90	95.041	Neolamprologus_brichardi
ENSSPAG00000013724	zgc:171482	98	96.774	ENSONIG00000018365	zgc:171482	78	96.774	Oreochromis_niloticus
ENSSPAG00000013724	zgc:171482	98	97.581	ENSORLG00000007607	zgc:171482	87	97.581	Oryzias_latipes
ENSSPAG00000013724	zgc:171482	91	99.130	ENSORLG00020003563	zgc:171482	87	96.774	Oryzias_latipes_hni
ENSSPAG00000013724	zgc:171482	98	97.581	ENSORLG00015008552	zgc:171482	87	97.581	Oryzias_latipes_hsok
ENSSPAG00000013724	zgc:171482	98	97.581	ENSOMEG00000003526	zgc:171482	87	97.581	Oryzias_melastigma
ENSSPAG00000013724	zgc:171482	87	90.909	ENSPKIG00000016244	zgc:171482	89	84.000	Paramormyrops_kingsleyae
ENSSPAG00000013724	zgc:171482	97	91.935	ENSPKIG00000015911	-	86	91.935	Paramormyrops_kingsleyae
ENSSPAG00000013724	zgc:171482	98	95.161	ENSPMGG00000020230	zgc:171482	82	95.161	Periophthalmus_magnuspinnatus
ENSSPAG00000013724	zgc:171482	98	97.581	ENSPFOG00000001974	zgc:171482	78	97.581	Poecilia_formosa
ENSSPAG00000013724	zgc:171482	98	97.581	ENSPLAG00000003327	zgc:171482	79	97.581	Poecilia_latipinna
ENSSPAG00000013724	zgc:171482	98	97.581	ENSPMEG00000004988	zgc:171482	75	97.581	Poecilia_mexicana
ENSSPAG00000013724	zgc:171482	98	97.581	ENSPREG00000019241	zgc:171482	90	97.581	Poecilia_reticulata
ENSSPAG00000013724	zgc:171482	98	96.774	ENSPNYG00000007773	zgc:171482	86	96.774	Pundamilia_nyererei
ENSSPAG00000013724	zgc:171482	91	93.913	ENSPNAG00000007619	zgc:171482	79	93.162	Pygocentrus_nattereri
ENSSPAG00000013724	zgc:171482	92	90.517	ENSSFOG00015021238	zgc:171482	78	90.517	Scleropages_formosus
ENSSPAG00000013724	zgc:171482	99	84.800	ENSSFOG00015016149	zgc:171482	97	84.800	Scleropages_formosus
ENSSPAG00000013724	zgc:171482	98	97.581	ENSSMAG00000002715	zgc:171482	79	97.581	Scophthalmus_maximus
ENSSPAG00000013724	zgc:171482	98	99.194	ENSSDUG00000008773	zgc:171482	87	99.194	Seriola_dumerili
ENSSPAG00000013724	zgc:171482	98	99.194	ENSSLDG00000019510	zgc:171482	87	99.194	Seriola_lalandi_dorsalis
ENSSPAG00000013724	zgc:171482	98	93.548	ENSTRUG00000005705	zgc:171482	73	93.548	Takifugu_rubripes
ENSSPAG00000013724	zgc:171482	98	74.194	ENSTNIG00000008679	zgc:171482	80	74.194	Tetraodon_nigroviridis
ENSSPAG00000013724	zgc:171482	78	91.111	ENSXETG00000013525	zmat4	75	91.111	Xenopus_tropicalis
ENSSPAG00000013724	zgc:171482	94	88.333	ENSXMAG00000002641	zgc:171482	77	88.333	Xiphophorus_maculatus