EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000013856 (Gene tree)
Gene ID: 103369707
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 1903 bases
Position: chrKK581392.1:122194-124096
Accession: 103369707
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000018371	GTP_EFTU	PF00009.27	3.7e-55	1	1
ENSSPAP00000018371	MMR_HSR1	PF01926.23	1.5e-07	1	1
ENSSPAP00000018371	GTP_EFTU_D2	PF03144.25	1.5e-12	1	1
ENSSPAP00000018371	GTP_EFTU_D3	PF03143.17	5.4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000018649	-	1374	XM_008298485	ENSSPAP00000018371	457 (aa)	XP_008296707	UPI0004983A94

Gene Model

Click here to download ENSSPAG00000013856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000013856's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000013856	si:dkey-37o8.1	97	69.977	ENSSPAG00000001742	-	96	69.977
ENSSPAG00000013856	si:dkey-37o8.1	96	70.068	ENSSPAG00000001710	-	99	68.490
ENSSPAG00000013856	si:dkey-37o8.1	97	72.009	ENSSPAG00000007007	eef1a1b	96	72.009
ENSSPAG00000013856	si:dkey-37o8.1	97	36.569	ENSSPAG00000004622	-	73	36.652
ENSSPAG00000013856	si:dkey-37o8.1	96	30.357	ENSSPAG00000009936	tufm	89	30.357
ENSSPAG00000013856	si:dkey-37o8.1	97	36.569	ENSSPAG00000009785	-	84	36.652
ENSSPAG00000013856	si:dkey-37o8.1	96	36.652	ENSSPAG00000011542	gspt1l	82	35.520
ENSSPAG00000013856	si:dkey-37o8.1	97	71.558	ENSSPAG00000015488	-	96	71.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000013856	si:dkey-37o8.1	100	95.842	ENSAPOG00000016459	si:dkey-37o8.1	100	95.842	Acanthochromis_polyacanthus
ENSSPAG00000013856	si:dkey-37o8.1	97	89.888	ENSACIG00000020985	si:dkey-37o8.1	83	89.888	Amphilophus_citrinellus
ENSSPAG00000013856	si:dkey-37o8.1	100	97.155	ENSAOCG00000002663	si:dkey-37o8.1	100	97.155	Amphiprion_ocellaris
ENSSPAG00000013856	si:dkey-37o8.1	100	97.374	ENSAPEG00000012670	si:dkey-37o8.1	100	97.374	Amphiprion_percula
ENSSPAG00000013856	si:dkey-37o8.1	92	95.261	ENSATEG00000002217	si:dkey-37o8.1	99	95.261	Anabas_testudineus
ENSSPAG00000013856	si:dkey-37o8.1	100	91.904	ENSACLG00000003519	si:dkey-37o8.1	100	91.904	Astatotilapia_calliptera
ENSSPAG00000013856	si:dkey-37o8.1	100	86.463	ENSAMXG00000002728	si:dkey-37o8.1	100	86.463	Astyanax_mexicanus
ENSSPAG00000013856	si:dkey-37o8.1	99	74.123	ENSCPBG00000020570	-	87	75.626	Chrysemys_picta_bellii
ENSSPAG00000013856	si:dkey-37o8.1	100	86.710	ENSCSEG00000019807	si:dkey-37o8.1	100	85.991	Cynoglossus_semilaevis
ENSSPAG00000013856	si:dkey-37o8.1	99	90.508	ENSCVAG00000009828	si:dkey-37o8.1	99	90.508	Cyprinodon_variegatus
ENSSPAG00000013856	si:dkey-37o8.1	100	83.406	ENSDARG00000071727	si:dkey-37o8.1	95	83.406	Danio_rerio
ENSSPAG00000013856	si:dkey-37o8.1	100	84.934	ENSELUG00000007495	si:dkey-37o8.1	100	84.934	Esox_lucius
ENSSPAG00000013856	si:dkey-37o8.1	99	90.287	ENSFHEG00000017452	si:dkey-37o8.1	99	90.287	Fundulus_heteroclitus
ENSSPAG00000013856	si:dkey-37o8.1	99	81.015	ENSGMOG00000006122	si:dkey-37o8.1	99	81.015	Gadus_morhua
ENSSPAG00000013856	si:dkey-37o8.1	98	84.000	ENSGAFG00000000367	si:dkey-37o8.1	100	84.000	Gambusia_affinis
ENSSPAG00000013856	si:dkey-37o8.1	100	89.059	ENSGACG00000004505	si:dkey-37o8.1	100	89.059	Gasterosteus_aculeatus
ENSSPAG00000013856	si:dkey-37o8.1	99	74.561	ENSGAGG00000007724	-	97	77.885	Gopherus_agassizii
ENSSPAG00000013856	si:dkey-37o8.1	100	91.685	ENSHBUG00000015515	si:dkey-37o8.1	100	91.685	Haplochromis_burtoni
ENSSPAG00000013856	si:dkey-37o8.1	98	80.804	ENSHCOG00000001215	si:dkey-37o8.1	99	80.804	Hippocampus_comes
ENSSPAG00000013856	si:dkey-37o8.1	100	84.279	ENSIPUG00000004067	si:dkey-37o8.1	100	84.279	Ictalurus_punctatus
ENSSPAG00000013856	si:dkey-37o8.1	100	90.372	ENSKMAG00000015910	si:dkey-37o8.1	100	90.372	Kryptolebias_marmoratus
ENSSPAG00000013856	si:dkey-37o8.1	99	93.792	ENSLBEG00000021334	si:dkey-37o8.1	90	93.792	Labrus_bergylta
ENSSPAG00000013856	si:dkey-37o8.1	97	78.104	ENSLACG00000003948	si:dkey-37o8.1	96	78.104	Latimeria_chalumnae
ENSSPAG00000013856	si:dkey-37o8.1	97	82.619	ENSLOCG00000011245	si:dkey-37o8.1	97	82.619	Lepisosteus_oculatus
ENSSPAG00000013856	si:dkey-37o8.1	99	75.664	ENSMAMG00000009907	si:dkey-37o8.1	95	75.664	Mastacembelus_armatus
ENSSPAG00000013856	si:dkey-37o8.1	100	91.904	ENSMZEG00005018358	si:dkey-37o8.1	100	91.904	Maylandia_zebra
ENSSPAG00000013856	si:dkey-37o8.1	98	91.741	ENSMMOG00000004111	si:dkey-37o8.1	98	91.741	Mola_mola
ENSSPAG00000013856	si:dkey-37o8.1	96	82.420	ENSMALG00000017152	si:dkey-37o8.1	99	82.420	Monopterus_albus
ENSSPAG00000013856	si:dkey-37o8.1	100	91.685	ENSNBRG00000013552	si:dkey-37o8.1	100	91.685	Neolamprologus_brichardi
ENSSPAG00000013856	si:dkey-37o8.1	100	91.685	ENSONIG00000006165	si:dkey-37o8.1	100	91.685	Oreochromis_niloticus
ENSSPAG00000013856	si:dkey-37o8.1	100	91.028	ENSORLG00000019066	si:dkey-37o8.1	100	91.028	Oryzias_latipes
ENSSPAG00000013856	si:dkey-37o8.1	100	91.028	ENSORLG00020008094	si:dkey-37o8.1	100	91.028	Oryzias_latipes_hni
ENSSPAG00000013856	si:dkey-37o8.1	100	90.591	ENSORLG00015008410	si:dkey-37o8.1	100	90.591	Oryzias_latipes_hsok
ENSSPAG00000013856	si:dkey-37o8.1	100	92.123	ENSOMEG00000001868	si:dkey-37o8.1	100	92.123	Oryzias_melastigma
ENSSPAG00000013856	si:dkey-37o8.1	98	84.701	ENSPKIG00000017246	si:dkey-37o8.1	98	84.701	Paramormyrops_kingsleyae
ENSSPAG00000013856	si:dkey-37o8.1	57	69.173	ENSPSIG00000008080	-	94	69.173	Pelodiscus_sinensis
ENSSPAG00000013856	si:dkey-37o8.1	99	91.150	ENSPFOG00000013173	si:dkey-37o8.1	99	91.150	Poecilia_formosa
ENSSPAG00000013856	si:dkey-37o8.1	100	89.278	ENSPLAG00000010405	si:dkey-37o8.1	100	89.278	Poecilia_latipinna
ENSSPAG00000013856	si:dkey-37o8.1	99	91.372	ENSPMEG00000015233	si:dkey-37o8.1	99	91.372	Poecilia_mexicana
ENSSPAG00000013856	si:dkey-37o8.1	98	90.646	ENSPREG00000006280	si:dkey-37o8.1	99	90.646	Poecilia_reticulata
ENSSPAG00000013856	si:dkey-37o8.1	100	91.247	ENSPNYG00000002059	si:dkey-37o8.1	100	91.247	Pundamilia_nyererei
ENSSPAG00000013856	si:dkey-37o8.1	100	84.279	ENSPNAG00000009990	si:dkey-37o8.1	100	84.279	Pygocentrus_nattereri
ENSSPAG00000013856	si:dkey-37o8.1	97	84.199	ENSSFOG00015019070	si:dkey-37o8.1	97	84.199	Scleropages_formosus
ENSSPAG00000013856	si:dkey-37o8.1	100	94.530	ENSSMAG00000016143	si:dkey-37o8.1	100	94.530	Scophthalmus_maximus
ENSSPAG00000013856	si:dkey-37o8.1	100	93.873	ENSSDUG00000009163	si:dkey-37o8.1	100	93.873	Seriola_dumerili
ENSSPAG00000013856	si:dkey-37o8.1	100	93.654	ENSSLDG00000023761	si:dkey-37o8.1	100	93.654	Seriola_lalandi_dorsalis
ENSSPAG00000013856	si:dkey-37o8.1	97	72.584	ENSSPUG00000007467	-	97	72.584	Sphenodon_punctatus
ENSSPAG00000013856	si:dkey-37o8.1	99	91.850	ENSTRUG00000009006	si:dkey-37o8.1	100	91.850	Takifugu_rubripes
ENSSPAG00000013856	si:dkey-37o8.1	99	90.789	ENSTNIG00000017138	si:dkey-37o8.1	98	90.789	Tetraodon_nigroviridis
ENSSPAG00000013856	si:dkey-37o8.1	96	77.626	ENSXETG00000017744	42Sp50	95	77.626	Xenopus_tropicalis
ENSSPAG00000013856	si:dkey-37o8.1	98	90.646	ENSXCOG00000012296	si:dkey-37o8.1	99	90.646	Xiphophorus_couchianus
ENSSPAG00000013856	si:dkey-37o8.1	99	90.708	ENSXMAG00000001998	si:dkey-37o8.1	99	90.708	Xiphophorus_maculatus