EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000013878 (Gene tree)
Gene ID: 103360126
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase ddx6
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 14848 bases
Position: chrKK580488.1:214753-229600
Accession: 103360126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000018404	DEAD	PF00270.29	4.8e-42	1	1
ENSSPAP00000018446	DEAD	PF00270.29	9.8e-26	1	2
ENSSPAP00000018446	DEAD	PF00270.29	9.8e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000018682	-	6907	XM_008285790	ENSSPAP00000018404	489 (aa)	XP_008284012	UPI000495617C
ENSSPAT00000018725	-	1281	-	ENSSPAP00000018446	426 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000013878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000013878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000013878	-	70	36.034	ENSSPAG00000018381	zgc:193690	77	36.034
ENSSPAG00000013878	-	68	31.302	ENSSPAG00000011806	ddx55	59	31.302
ENSSPAG00000013878	-	85	34.762	ENSSPAG00000006186	-	96	34.434
ENSSPAG00000013878	-	96	89.103	ENSSPAG00000001578	ddx61	98	88.050
ENSSPAG00000013878	-	71	31.461	ENSSPAG00000015548	ddx10	61	30.769
ENSSPAG00000013878	-	71	31.831	ENSSPAG00000006858	ddx43	51	31.831
ENSSPAG00000013878	-	59	30.038	ENSSPAG00000014307	ddx4	65	30.038
ENSSPAG00000013878	-	71	36.264	ENSSPAG00000002460	ddx19	79	36.264
ENSSPAG00000013878	-	63	30.721	ENSSPAG00000019808	-	77	30.721
ENSSPAG00000013878	-	79	30.982	ENSSPAG00000011486	ddx49	83	30.982
ENSSPAG00000013878	-	76	30.628	ENSSPAG00000014946	DDX5	59	30.628
ENSSPAG00000013878	-	74	40.741	ENSSPAG00000010225	-	54	31.421
ENSSPAG00000013878	-	81	36.090	ENSSPAG00000019372	DDX39A	93	36.090
ENSSPAG00000013878	-	81	30.500	ENSSPAG00000016431	ddx47	76	30.688
ENSSPAG00000013878	-	76	30.628	ENSSPAG00000004363	ddx5	61	30.628
ENSSPAG00000013878	-	75	38.978	ENSSPAG00000002326	eif4a1b	92	38.978
ENSSPAG00000013878	-	72	30.163	ENSSPAG00000018675	DDX41	59	30.623
ENSSPAG00000013878	-	98	82.436	ENSSPAG00000023258	ddx6	99	82.099
ENSSPAG00000013878	-	72	32.320	ENSSPAG00000017130	si:dkey-156n14.5	57	32.086
ENSSPAG00000013878	-	75	40.054	ENSSPAG00000002382	eif4a2	90	40.054
ENSSPAG00000013878	-	74	40.741	ENSSPAG00000018177	-	60	31.100
ENSSPAG00000013878	-	76	37.600	ENSSPAG00000017012	eif4a3	90	37.600
ENSSPAG00000013878	-	69	40.678	ENSSPAG00000023554	ddx1	51	40.678

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000013878	-	98	86.820	ENSAPOG00000014829	ddx61	98	86.820	Acanthochromis_polyacanthus
ENSSPAG00000013878	-	77	98.667	ENSAPOG00000023627	-	95	98.667	Acanthochromis_polyacanthus
ENSSPAG00000013878	-	100	90.184	ENSACIG00000018355	-	100	90.184	Amphilophus_citrinellus
ENSSPAG00000013878	-	98	87.866	ENSAOCG00000007627	ddx61	98	87.866	Amphiprion_ocellaris
ENSSPAG00000013878	-	100	98.160	ENSAOCG00000006269	-	100	98.160	Amphiprion_ocellaris
ENSSPAG00000013878	-	98	87.866	ENSAPEG00000007293	ddx61	98	87.866	Amphiprion_percula
ENSSPAG00000013878	-	100	98.160	ENSAPEG00000020642	-	100	98.160	Amphiprion_percula
ENSSPAG00000013878	-	100	98.160	ENSAPEG00000021368	-	100	98.160	Amphiprion_percula
ENSSPAG00000013878	-	97	87.949	ENSATEG00000011302	ddx61	98	87.949	Anabas_testudineus
ENSSPAG00000013878	-	100	96.115	ENSATEG00000005424	-	100	96.115	Anabas_testudineus
ENSSPAG00000013878	-	99	87.441	ENSACLG00000027620	ddx61	99	86.722	Astatotilapia_calliptera
ENSSPAG00000013878	-	100	97.137	ENSACLG00000003260	-	100	97.137	Astatotilapia_calliptera
ENSSPAG00000013878	-	97	87.185	ENSAMXG00000032542	ddx61	99	86.420	Astyanax_mexicanus
ENSSPAG00000013878	-	99	88.032	ENSAMXG00000033980	-	100	88.032	Astyanax_mexicanus
ENSSPAG00000013878	-	100	94.888	ENSCSEG00000009893	-	100	94.888	Cynoglossus_semilaevis
ENSSPAG00000013878	-	100	92.638	ENSCVAG00000011006	-	100	92.638	Cyprinodon_variegatus
ENSSPAG00000013878	-	99	85.921	ENSDARG00000018425	ddx61	99	85.921	Danio_rerio
ENSSPAG00000013878	-	99	89.598	ENSELUG00000020545	ddx61	99	88.589	Esox_lucius
ENSSPAG00000013878	-	99	89.810	ENSELUG00000022538	-	99	89.796	Esox_lucius
ENSSPAG00000013878	-	100	93.252	ENSFHEG00000015487	-	100	93.252	Fundulus_heteroclitus
ENSSPAG00000013878	-	66	88.073	ENSGMOG00000003561	-	100	88.754	Gadus_morhua
ENSSPAG00000013878	-	96	88.632	ENSGMOG00000013762	ddx61	99	87.942	Gadus_morhua
ENSSPAG00000013878	-	100	92.857	ENSGAFG00000015865	-	100	92.857	Gambusia_affinis
ENSSPAG00000013878	-	99	95.859	ENSGACG00000002413	-	100	95.859	Gasterosteus_aculeatus
ENSSPAG00000013878	-	98	85.391	ENSGACG00000003401	ddx61	100	85.391	Gasterosteus_aculeatus
ENSSPAG00000013878	-	100	97.137	ENSHBUG00000017033	-	100	97.137	Haplochromis_burtoni
ENSSPAG00000013878	-	98	86.929	ENSHBUG00000017832	ddx61	99	86.929	Haplochromis_burtoni
ENSSPAG00000013878	-	100	91.002	ENSHCOG00000012238	-	100	91.002	Hippocampus_comes
ENSSPAG00000013878	-	97	84.534	ENSHCOG00000008184	ddx61	97	84.534	Hippocampus_comes
ENSSPAG00000013878	-	96	86.111	ENSIPUG00000012823	DDX6	99	84.823	Ictalurus_punctatus
ENSSPAG00000013878	-	96	88.983	ENSIPUG00000008367	-	100	87.216	Ictalurus_punctatus
ENSSPAG00000013878	-	100	95.910	ENSKMAG00000007213	-	100	95.910	Kryptolebias_marmoratus
ENSSPAG00000013878	-	97	87.553	ENSLBEG00000001740	ddx61	98	87.553	Labrus_bergylta
ENSSPAG00000013878	-	100	94.960	ENSLBEG00000016890	-	100	94.960	Labrus_bergylta
ENSSPAG00000013878	-	97	85.062	ENSLACG00000015214	ddx61	100	85.062	Latimeria_chalumnae
ENSSPAG00000013878	-	98	51.659	ENSLOCG00000004352	ddx61	94	51.529	Lepisosteus_oculatus
ENSSPAG00000013878	-	100	97.347	ENSMAMG00000005559	-	100	97.347	Mastacembelus_armatus
ENSSPAG00000013878	-	97	87.789	ENSMAMG00000005321	ddx61	97	87.789	Mastacembelus_armatus
ENSSPAG00000013878	-	98	86.929	ENSMZEG00005003556	ddx61	99	86.929	Maylandia_zebra
ENSSPAG00000013878	-	100	97.137	ENSMZEG00005026268	-	100	97.137	Maylandia_zebra
ENSSPAG00000013878	-	99	96.190	ENSMMOG00000013694	-	95	96.190	Mola_mola
ENSSPAG00000013878	-	72	76.771	ENSMMOG00000008825	-	92	76.771	Mola_mola
ENSSPAG00000013878	-	96	86.994	ENSMMOG00000007415	ddx61	97	86.994	Mola_mola
ENSSPAG00000013878	-	97	75.992	ENSMALG00000013776	ddx61	96	75.992	Monopterus_albus
ENSSPAG00000013878	-	100	96.115	ENSMALG00000013817	-	100	96.115	Monopterus_albus
ENSSPAG00000013878	-	98	80.335	ENSNBRG00000015800	ddx61	99	80.335	Neolamprologus_brichardi
ENSSPAG00000013878	-	100	90.593	ENSNBRG00000015075	-	100	90.593	Neolamprologus_brichardi
ENSSPAG00000013878	-	98	87.238	ENSONIG00000011418	ddx61	99	87.238	Oreochromis_niloticus
ENSSPAG00000013878	-	100	97.342	ENSONIG00000013748	-	100	97.342	Oreochromis_niloticus
ENSSPAG00000013878	-	99	95.952	ENSORLG00000009178	-	100	94.479	Oryzias_latipes
ENSSPAG00000013878	-	99	96.190	ENSORLG00020015515	-	100	94.683	Oryzias_latipes_hni
ENSSPAG00000013878	-	99	96.190	ENSORLG00015006764	-	100	94.479	Oryzias_latipes_hsok
ENSSPAG00000013878	-	99	96.905	ENSOMEG00000022326	-	98	96.905	Oryzias_melastigma
ENSSPAG00000013878	-	99	91.315	ENSPKIG00000024264	ddx61	98	90.852	Paramormyrops_kingsleyae
ENSSPAG00000013878	-	100	83.878	ENSPMGG00000013355	-	100	83.878	Periophthalmus_magnuspinnatus
ENSSPAG00000013878	-	100	93.661	ENSPFOG00000005750	-	100	93.661	Poecilia_formosa
ENSSPAG00000013878	-	100	93.661	ENSPLAG00000000403	-	100	93.661	Poecilia_latipinna
ENSSPAG00000013878	-	100	93.252	ENSPMEG00000023737	-	100	93.252	Poecilia_mexicana
ENSSPAG00000013878	-	100	97.137	ENSPNYG00000003986	-	100	97.137	Pundamilia_nyererei
ENSSPAG00000013878	-	98	80.732	ENSPNYG00000015045	ddx61	99	80.732	Pundamilia_nyererei
ENSSPAG00000013878	-	98	86.875	ENSPNAG00000024072	ddx61	99	86.875	Pygocentrus_nattereri
ENSSPAG00000013878	-	99	88.798	ENSPNAG00000008742	-	100	88.798	Pygocentrus_nattereri
ENSSPAG00000013878	-	96	90.275	ENSSFOG00015021404	ddx61	99	88.367	Scleropages_formosus
ENSSPAG00000013878	-	100	95.706	ENSSMAG00000001793	-	100	95.706	Scophthalmus_maximus
ENSSPAG00000013878	-	96	87.633	ENSSMAG00000006591	ddx61	97	86.498	Scophthalmus_maximus
ENSSPAG00000013878	-	96	88.486	ENSSDUG00000009713	ddx61	99	86.929	Seriola_dumerili
ENSSPAG00000013878	-	100	98.163	ENSSDUG00000007530	-	100	98.163	Seriola_dumerili
ENSSPAG00000013878	-	96	88.273	ENSSLDG00000000132	ddx61	99	86.722	Seriola_lalandi_dorsalis
ENSSPAG00000013878	-	100	98.163	ENSSLDG00000007608	-	100	98.163	Seriola_lalandi_dorsalis
ENSSPAG00000013878	-	99	91.393	ENSTRUG00000012432	-	99	91.393	Takifugu_rubripes
ENSSPAG00000013878	-	98	92.292	ENSTNIG00000003560	-	100	92.292	Tetraodon_nigroviridis
ENSSPAG00000013878	-	98	94.988	ENSXCOG00000001406	-	95	94.988	Xiphophorus_couchianus
ENSSPAG00000013878	-	100	93.265	ENSXMAG00000016090	-	100	93.265	Xiphophorus_maculatus