EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000013906 (Gene tree)
Gene ID: 103373638
Gene Symbol: cpsf6
Alias: wu:fa22f12|zgc:85819
Full Name: cleavage and polyadenylation specific factor 6
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 16734 bases
Position: chrKK582106.1:76082-92815
Accession: 103373638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000018430	RRM_1	PF00076.22	3.6e-07	1	1
ENSSPAP00000018410	RRM_1	PF00076.22	4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000018708	-	4664	XM_008303566	ENSSPAP00000018430	549 (aa)	XP_008301788	UPI0004966088
ENSSPAT00000018688	-	4772	XM_008303563	ENSSPAP00000018410	585 (aa)	XP_008301785	UPI00049624EF

Gene Model

Click here to download ENSSPAG00000013906's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000013906's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000013906	cpsf6	96	47.090	ENSG00000149532	CPSF7	100	50.000	Homo_sapiens
ENSSPAG00000013906	cpsf6	94	82.792	ENSG00000111605	CPSF6	88	80.851	Homo_sapiens
ENSSPAG00000013906	cpsf6	100	93.019	ENSACIG00000018413	cpsf6	100	93.019	Amphilophus_citrinellus
ENSSPAG00000013906	cpsf6	100	99.636	ENSAOCG00000017865	cpsf6	100	99.636	Amphiprion_ocellaris
ENSSPAG00000013906	cpsf6	58	38.994	ENSAOCG00000012357	CPSF7	58	52.500	Amphiprion_ocellaris
ENSSPAG00000013906	cpsf6	59	38.182	ENSAPEG00000015375	CPSF7	58	52.500	Amphiprion_percula
ENSSPAG00000013906	cpsf6	64	48.020	ENSANAG00000024635	CPSF7	69	47.849	Aotus_nancymaae
ENSSPAG00000013906	cpsf6	100	96.246	ENSACLG00000026325	cpsf6	100	96.246	Astatotilapia_calliptera
ENSSPAG00000013906	cpsf6	95	81.538	ENSAMXG00000016745	CPSF6	75	93.333	Astyanax_mexicanus
ENSSPAG00000013906	cpsf6	65	53.125	ENSBTAG00000015263	CPSF7	71	52.778	Bos_taurus
ENSSPAG00000013906	cpsf6	96	47.090	ENSCJAG00000019282	CPSF7	80	57.895	Callithrix_jacchus
ENSSPAG00000013906	cpsf6	91	82.341	ENSCAFG00000000424	CPSF6	92	81.529	Canis_familiaris
ENSSPAG00000013906	cpsf6	65	53.125	ENSCAFG00000016152	CPSF7	71	53.333	Canis_familiaris
ENSSPAG00000013906	cpsf6	65	53.125	ENSCAFG00020012753	CPSF7	71	53.333	Canis_lupus_dingo
ENSSPAG00000013906	cpsf6	65	53.125	ENSCHIG00000014655	CPSF7	71	52.778	Capra_hircus
ENSSPAG00000013906	cpsf6	91	82.306	ENSTSYG00000008591	CPSF6	89	82.677	Carlito_syrichta
ENSSPAG00000013906	cpsf6	65	53.125	ENSTSYG00000010138	-	71	53.333	Carlito_syrichta
ENSSPAG00000013906	cpsf6	54	59.155	ENSCAPG00000006384	CPSF7	70	53.333	Cavia_aperea
ENSSPAG00000013906	cpsf6	57	59.155	ENSCPOG00000009980	CPSF7	71	53.333	Cavia_porcellus
ENSSPAG00000013906	cpsf6	96	47.090	ENSCCAG00000032367	CPSF7	71	52.778	Cebus_capucinus
ENSSPAG00000013906	cpsf6	94	82.792	ENSCCAG00000028149	CPSF6	90	84.181	Cebus_capucinus
ENSSPAG00000013906	cpsf6	94	82.792	ENSCATG00000039288	CPSF6	90	84.483	Cercocebus_atys
ENSSPAG00000013906	cpsf6	96	47.090	ENSCATG00000042801	CPSF7	73	52.778	Cercocebus_atys
ENSSPAG00000013906	cpsf6	57	59.155	ENSCLAG00000003174	CPSF7	71	52.778	Chinchilla_lanigera
ENSSPAG00000013906	cpsf6	96	47.090	ENSCSAG00000006414	CPSF7	73	52.778	Chlorocebus_sabaeus
ENSSPAG00000013906	cpsf6	91	82.306	ENSCANG00000037294	CPSF6	88	82.166	Colobus_angolensis_palliatus
ENSSPAG00000013906	cpsf6	65	53.646	ENSCGRG00001020382	Cpsf7	71	53.889	Cricetulus_griseus_chok1gshd
ENSSPAG00000013906	cpsf6	95	41.852	ENSCGRG00000017954	Cpsf7	73	53.889	Cricetulus_griseus_crigri
ENSSPAG00000013906	cpsf6	100	96.909	ENSCSEG00000008967	cpsf6	100	96.909	Cynoglossus_semilaevis
ENSSPAG00000013906	cpsf6	52	40.206	ENSCSEG00000001956	CPSF7	57	44.056	Cynoglossus_semilaevis
ENSSPAG00000013906	cpsf6	67	38.498	ENSCVAG00000007392	CPSF7	81	42.949	Cyprinodon_variegatus
ENSSPAG00000013906	cpsf6	95	91.171	ENSCVAG00000014857	cpsf6	95	91.171	Cyprinodon_variegatus
ENSSPAG00000013906	cpsf6	74	59.843	ENSDNOG00000018517	CPSF7	80	58.553	Dasypus_novemcinctus
ENSSPAG00000013906	cpsf6	65	50.521	ENSETEG00000003765	CPSF7	62	67.500	Echinops_telfairi
ENSSPAG00000013906	cpsf6	69	82.488	ENSETEG00000002097	CPSF6	75	84.409	Echinops_telfairi
ENSSPAG00000013906	cpsf6	94	55.638	ENSEBUG00000003540	cpsf6	67	79.042	Eptatretus_burgeri
ENSSPAG00000013906	cpsf6	65	53.125	ENSEASG00005008196	CPSF7	71	53.333	Equus_asinus_asinus
ENSSPAG00000013906	cpsf6	50	60.833	ENSEEUG00000005966	-	66	61.062	Erinaceus_europaeus
ENSSPAG00000013906	cpsf6	65	53.125	ENSFCAG00000013677	CPSF7	82	58.553	Felis_catus
ENSSPAG00000013906	cpsf6	91	81.188	ENSFALG00000010157	CPSF6	54	74.035	Ficedula_albicollis
ENSSPAG00000013906	cpsf6	71	46.739	ENSFALG00000011927	CPSF7	76	55.233	Ficedula_albicollis
ENSSPAG00000013906	cpsf6	96	47.619	ENSFDAG00000003919	CPSF7	71	53.333	Fukomys_damarensis
ENSSPAG00000013906	cpsf6	59	98.675	ENSGMOG00000012951	cpsf6	59	98.675	Gadus_morhua
ENSSPAG00000013906	cpsf6	95	33.813	ENSGALG00000040962	CPSF7	63	57.558	Gallus_gallus
ENSSPAG00000013906	cpsf6	94	82.600	ENSGAGG00000010228	CPSF6	54	74.035	Gopherus_agassizii
ENSSPAG00000013906	cpsf6	52	80.282	ENSGGOG00000008211	CPSF6	90	84.483	Gorilla_gorilla
ENSSPAG00000013906	cpsf6	100	96.727	ENSHBUG00000005998	cpsf6	100	96.727	Haplochromis_burtoni
ENSSPAG00000013906	cpsf6	96	47.619	ENSHGLG00000019090	-	73	53.333	Heterocephalus_glaber_female
ENSSPAG00000013906	cpsf6	95	38.930	ENSHGLG00100013933	-	73	53.333	Heterocephalus_glaber_male
ENSSPAG00000013906	cpsf6	95	86.071	ENSHCOG00000014555	cpsf6	95	84.973	Hippocampus_comes
ENSSPAG00000013906	cpsf6	65	53.125	ENSSTOG00000007708	CPSF7	71	53.333	Ictidomys_tridecemlineatus
ENSSPAG00000013906	cpsf6	96	47.619	ENSJJAG00000019390	Cpsf7	73	53.333	Jaculus_jaculus
ENSSPAG00000013906	cpsf6	94	94.981	ENSKMAG00000014794	cpsf6	95	93.682	Kryptolebias_marmoratus
ENSSPAG00000013906	cpsf6	56	40.559	ENSLBEG00000000947	CPSF7	59	47.788	Labrus_bergylta
ENSSPAG00000013906	cpsf6	100	95.455	ENSLBEG00000015762	cpsf6	100	95.455	Labrus_bergylta
ENSSPAG00000013906	cpsf6	93	32.510	ENSLACG00000005542	CPSF7	70	44.304	Latimeria_chalumnae
ENSSPAG00000013906	cpsf6	66	89.820	ENSLOCG00000016190	cpsf6	60	91.566	Lepisosteus_oculatus
ENSSPAG00000013906	cpsf6	65	53.646	ENSLAFG00000032084	CPSF7	71	53.333	Loxodonta_africana
ENSSPAG00000013906	cpsf6	94	82.792	ENSMFAG00000045318	CPSF6	90	84.483	Macaca_fascicularis
ENSSPAG00000013906	cpsf6	96	47.090	ENSMFAG00000001401	CPSF7	71	52.778	Macaca_fascicularis
ENSSPAG00000013906	cpsf6	96	47.090	ENSMMUG00000015280	CPSF7	73	52.778	Macaca_mulatta
ENSSPAG00000013906	cpsf6	96	47.090	ENSMNEG00000029585	CPSF7	73	52.778	Macaca_nemestrina
ENSSPAG00000013906	cpsf6	94	82.792	ENSMNEG00000036311	CPSF6	90	84.483	Macaca_nemestrina
ENSSPAG00000013906	cpsf6	96	47.090	ENSMLEG00000031269	CPSF7	69	52.778	Mandrillus_leucophaeus
ENSSPAG00000013906	cpsf6	91	82.306	ENSMLEG00000003957	CPSF6	88	82.166	Mandrillus_leucophaeus
ENSSPAG00000013906	cpsf6	100	97.455	ENSMAMG00000010385	cpsf6	100	97.455	Mastacembelus_armatus
ENSSPAG00000013906	cpsf6	100	96.727	ENSMZEG00005007975	cpsf6	100	96.727	Maylandia_zebra
ENSSPAG00000013906	cpsf6	95	43.716	ENSMGAG00000004876	CPSF7	62	59.639	Meleagris_gallopavo
ENSSPAG00000013906	cpsf6	65	53.125	ENSMAUG00000013020	Cpsf7	71	53.333	Mesocricetus_auratus
ENSSPAG00000013906	cpsf6	65	53.125	ENSMICG00000013788	CPSF7	71	53.333	Microcebus_murinus
ENSSPAG00000013906	cpsf6	52	80.282	ENSMICG00000007385	-	90	84.483	Microcebus_murinus
ENSSPAG00000013906	cpsf6	95	35.110	ENSMOCG00000000072	Cpsf7	71	53.333	Microtus_ochrogaster
ENSSPAG00000013906	cpsf6	65	51.531	ENSMODG00000020364	CPSF7	72	51.042	Monodelphis_domestica
ENSSPAG00000013906	cpsf6	82	99.103	ENSMALG00000014908	cpsf6	89	99.103	Monopterus_albus
ENSSPAG00000013906	cpsf6	65	53.125	MGP_CAROLIEiJ_G0022690	Cpsf7	71	53.333	Mus_caroli
ENSSPAG00000013906	cpsf6	65	53.125	ENSMUSG00000034820	Cpsf7	71	53.333	Mus_musculus
ENSSPAG00000013906	cpsf6	65	53.125	MGP_PahariEiJ_G0014184	Cpsf7	71	53.333	Mus_pahari
ENSSPAG00000013906	cpsf6	65	53.125	MGP_SPRETEiJ_G0023604	Cpsf7	71	53.333	Mus_spretus
ENSSPAG00000013906	cpsf6	63	52.083	ENSMPUG00000014163	CPSF7	68	52.222	Mustela_putorius_furo
ENSSPAG00000013906	cpsf6	63	89.130	ENSMLUG00000028728	-	80	86.111	Myotis_lucifugus
ENSSPAG00000013906	cpsf6	77	73.077	ENSMLUG00000023960	-	74	77.273	Myotis_lucifugus
ENSSPAG00000013906	cpsf6	96	47.090	ENSMLUG00000013278	CPSF7	73	53.333	Myotis_lucifugus
ENSSPAG00000013906	cpsf6	65	53.125	ENSNGAG00000005031	Cpsf7	71	53.333	Nannospalax_galili
ENSSPAG00000013906	cpsf6	100	97.091	ENSNBRG00000004089	cpsf6	100	97.091	Neolamprologus_brichardi
ENSSPAG00000013906	cpsf6	65	52.604	ENSNLEG00000002529	CPSF7	65	52.778	Nomascus_leucogenys
ENSSPAG00000013906	cpsf6	94	82.792	ENSNLEG00000003798	CPSF6	90	84.483	Nomascus_leucogenys
ENSSPAG00000013906	cpsf6	65	54.167	ENSMEUG00000002261	CPSF7	71	54.444	Notamacropus_eugenii
ENSSPAG00000013906	cpsf6	91	63.301	ENSODEG00000004418	-	81	89.326	Octodon_degus
ENSSPAG00000013906	cpsf6	65	50.769	ENSODEG00000002610	CPSF7	71	53.005	Octodon_degus
ENSSPAG00000013906	cpsf6	95	94.775	ENSONIG00000011702	cpsf6	95	94.595	Oreochromis_niloticus
ENSSPAG00000013906	cpsf6	95	42.910	ENSOCUG00000024726	CPSF7	71	52.778	Oryctolagus_cuniculus
ENSSPAG00000013906	cpsf6	68	35.965	ENSORLG00000006495	CPSF7	59	48.276	Oryzias_latipes
ENSSPAG00000013906	cpsf6	68	35.965	ENSORLG00020012657	CPSF7	59	48.276	Oryzias_latipes_hni
ENSSPAG00000013906	cpsf6	68	35.965	ENSORLG00015011091	CPSF7	58	44.915	Oryzias_latipes_hsok
ENSSPAG00000013906	cpsf6	68	36.364	ENSOMEG00000000539	CPSF7	60	47.458	Oryzias_melastigma
ENSSPAG00000013906	cpsf6	65	53.125	ENSOGAG00000027958	CPSF7	66	53.333	Otolemur_garnettii
ENSSPAG00000013906	cpsf6	96	47.090	ENSOARG00000012937	CPSF7	64	52.778	Ovis_aries
ENSSPAG00000013906	cpsf6	65	52.604	ENSPPAG00000028232	CPSF7	69	52.778	Pan_paniscus
ENSSPAG00000013906	cpsf6	96	47.619	ENSPPRG00000008538	CPSF7	71	53.333	Panthera_pardus
ENSSPAG00000013906	cpsf6	85	81.953	ENSPTIG00000004079	CPSF6	51	86.614	Panthera_tigris_altaica
ENSSPAG00000013906	cpsf6	65	53.125	ENSPTIG00000021699	CPSF7	71	53.333	Panthera_tigris_altaica
ENSSPAG00000013906	cpsf6	96	47.090	ENSPTRG00000003742	CPSF7	71	52.778	Pan_troglodytes
ENSSPAG00000013906	cpsf6	52	80.282	ENSPTRG00000005205	CPSF6	90	84.483	Pan_troglodytes
ENSSPAG00000013906	cpsf6	94	82.792	ENSPANG00000011641	CPSF6	90	84.483	Papio_anubis
ENSSPAG00000013906	cpsf6	94	47.090	ENSPANG00000006037	CPSF7	67	52.778	Papio_anubis
ENSSPAG00000013906	cpsf6	64	46.328	ENSPKIG00000018054	CPSF7	62	52.459	Paramormyrops_kingsleyae
ENSSPAG00000013906	cpsf6	95	41.527	ENSPEMG00000012648	Cpsf7	73	53.333	Peromyscus_maniculatus_bairdii
ENSSPAG00000013906	cpsf6	50	42.808	ENSPMAG00000008077	-	68	49.198	Petromyzon_marinus
ENSSPAG00000013906	cpsf6	65	51.531	ENSPCIG00000002551	CPSF7	73	64.394	Phascolarctos_cinereus
ENSSPAG00000013906	cpsf6	77	93.939	ENSPFOG00000006990	cpsf6	60	93.262	Poecilia_formosa
ENSSPAG00000013906	cpsf6	94	93.834	ENSPLAG00000005715	cpsf6	95	93.333	Poecilia_latipinna
ENSSPAG00000013906	cpsf6	94	93.834	ENSPMEG00000001353	cpsf6	95	93.333	Poecilia_mexicana
ENSSPAG00000013906	cpsf6	94	91.329	ENSPREG00000004417	cpsf6	95	93.333	Poecilia_reticulata
ENSSPAG00000013906	cpsf6	96	47.090	ENSPPYG00000003188	CPSF7	71	52.778	Pongo_abelii
ENSSPAG00000013906	cpsf6	52	80.282	ENSPCOG00000024384	CPSF6	90	84.181	Propithecus_coquereli
ENSSPAG00000013906	cpsf6	65	53.125	ENSPCOG00000011976	CPSF7	71	53.333	Propithecus_coquereli
ENSSPAG00000013906	cpsf6	65	53.125	ENSPVAG00000010675	CPSF7	71	53.333	Pteropus_vampyrus
ENSSPAG00000013906	cpsf6	100	96.416	ENSPNYG00000020315	cpsf6	100	96.416	Pundamilia_nyererei
ENSSPAG00000013906	cpsf6	95	41.527	ENSRNOG00000020668	Cpsf7	73	53.333	Rattus_norvegicus
ENSSPAG00000013906	cpsf6	52	80.282	ENSRBIG00000042827	CPSF6	90	84.483	Rhinopithecus_bieti
ENSSPAG00000013906	cpsf6	96	47.090	ENSRBIG00000031429	CPSF7	82	57.895	Rhinopithecus_bieti
ENSSPAG00000013906	cpsf6	96	47.090	ENSRROG00000045009	CPSF7	71	52.778	Rhinopithecus_roxellana
ENSSPAG00000013906	cpsf6	94	82.792	ENSRROG00000042758	CPSF6	90	84.483	Rhinopithecus_roxellana
ENSSPAG00000013906	cpsf6	85	81.953	ENSSBOG00000010652	CPSF6	89	82.166	Saimiri_boliviensis_boliviensis
ENSSPAG00000013906	cpsf6	96	47.090	ENSSBOG00000018431	CPSF7	71	52.778	Saimiri_boliviensis_boliviensis
ENSSPAG00000013906	cpsf6	62	54.167	ENSSHAG00000011964	CPSF7	68	54.444	Sarcophilus_harrisii
ENSSPAG00000013906	cpsf6	62	42.458	ENSSFOG00015010288	cpsf7	69	44.444	Scleropages_formosus
ENSSPAG00000013906	cpsf6	100	96.587	ENSSMAG00000000471	cpsf6	100	96.587	Scophthalmus_maximus
ENSSPAG00000013906	cpsf6	100	98.727	ENSSDUG00000005024	cpsf6	100	98.727	Seriola_dumerili
ENSSPAG00000013906	cpsf6	100	98.727	ENSSLDG00000009042	cpsf6	100	98.727	Seriola_lalandi_dorsalis
ENSSPAG00000013906	cpsf6	85	84.646	ENSSARG00000006743	CPSF6	75	86.166	Sorex_araneus
ENSSPAG00000013906	cpsf6	65	53.333	ENSSPUG00000019344	CPSF7	73	55.682	Sphenodon_punctatus
ENSSPAG00000013906	cpsf6	74	59.843	ENSSSCG00000013083	CPSF7	80	58.553	Sus_scrofa
ENSSPAG00000013906	cpsf6	62	49.718	ENSTGUG00000006513	CPSF7	74	54.497	Taeniopygia_guttata
ENSSPAG00000013906	cpsf6	62	52.604	ENSTTRG00000011085	CPSF7	70	53.333	Tursiops_truncatus
ENSSPAG00000013906	cpsf6	65	53.125	ENSUAMG00000017809	CPSF7	71	53.333	Ursus_americanus
ENSSPAG00000013906	cpsf6	85	81.953	ENSUAMG00000023492	CPSF6	51	86.614	Ursus_americanus
ENSSPAG00000013906	cpsf6	96	47.619	ENSUMAG00000011825	CPSF7	73	53.333	Ursus_maritimus
ENSSPAG00000013906	cpsf6	85	81.953	ENSUMAG00000020779	CPSF6	70	89.840	Ursus_maritimus
ENSSPAG00000013906	cpsf6	74	59.843	ENSVVUG00000004939	CPSF7	80	58.553	Vulpes_vulpes
ENSSPAG00000013906	cpsf6	97	41.697	ENSXETG00000006715	cpsf7	65	47.191	Xenopus_tropicalis
ENSSPAG00000013906	cpsf6	94	93.449	ENSXCOG00000013423	cpsf6	94	93.449	Xiphophorus_couchianus
ENSSPAG00000013906	cpsf6	94	85.045	ENSXMAG00000003459	cpsf6	95	93.153	Xiphophorus_maculatus