EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000013996 (Gene tree)
Gene ID: 103364630
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 12662 bases
Position: chrKK580834.1:1170-13831
Accession: 103364630
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000018535	RRM_1	PF00076.22	2.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000018815	-	2520	XM_008291794	ENSSPAP00000018535	316 (aa)	XP_008290016	UPI000495DA8E

Gene Model

Click here to download ENSSPAG00000013996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000013996's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000013996	-	84	50.376	ENSSPAG00000013858	-	70	54.976
ENSSPAG00000013996	-	86	83.333	ENSSPAG00000023204	-	85	84.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000013996	-	67	57.944	ENSG00000184672	RALYL	93	75.949	Homo_sapiens
ENSSPAG00000013996	-	79	87.747	ENSAPOG00000006963	hnrnpc	85	82.576	Acanthochromis_polyacanthus
ENSSPAG00000013996	-	97	91.883	ENSACIG00000016568	-	100	90.554	Amphilophus_citrinellus
ENSSPAG00000013996	-	80	83.012	ENSACIG00000000270	-	99	76.699	Amphilophus_citrinellus
ENSSPAG00000013996	-	79	88.142	ENSAOCG00000003896	-	85	82.955	Amphiprion_ocellaris
ENSSPAG00000013996	-	100	94.410	ENSAOCG00000021616	-	100	95.342	Amphiprion_ocellaris
ENSSPAG00000013996	-	84	97.358	ENSAPEG00000019962	-	93	94.828	Amphiprion_percula
ENSSPAG00000013996	-	79	88.142	ENSAPEG00000001489	-	85	82.955	Amphiprion_percula
ENSSPAG00000013996	-	80	84.436	ENSATEG00000011734	-	99	77.524	Anabas_testudineus
ENSSPAG00000013996	-	84	97.368	ENSATEG00000018006	-	100	90.343	Anabas_testudineus
ENSSPAG00000013996	-	67	54.867	ENSAPLG00000015574	RALYL	76	56.250	Anas_platyrhynchos
ENSSPAG00000013996	-	67	56.637	ENSACAG00000028464	RALYL	75	57.143	Anolis_carolinensis
ENSSPAG00000013996	-	67	57.944	ENSANAG00000023383	RALYL	74	58.019	Aotus_nancymaae
ENSSPAG00000013996	-	84	93.633	ENSACLG00000005707	-	90	93.633	Astatotilapia_calliptera
ENSSPAG00000013996	-	79	81.423	ENSACLG00000013636	-	87	80.303	Astatotilapia_calliptera
ENSSPAG00000013996	-	79	81.818	ENSACLG00000000995	-	83	85.202	Astatotilapia_calliptera
ENSSPAG00000013996	-	83	79.545	ENSAMXG00000034915	zgc:55733	91	76.515	Astyanax_mexicanus
ENSSPAG00000013996	-	66	78.095	ENSAMXG00000042946	hnrnpc	99	74.742	Astyanax_mexicanus
ENSSPAG00000013996	-	67	57.944	ENSCJAG00000000402	RALYL	74	58.019	Callithrix_jacchus
ENSSPAG00000013996	-	66	56.054	ENSCPOG00000012314	RALYL	75	55.605	Cavia_porcellus
ENSSPAG00000013996	-	67	57.944	ENSCCAG00000025003	RALYL	77	75.949	Cebus_capucinus
ENSSPAG00000013996	-	67	57.944	ENSCATG00000042145	RALYL	74	58.019	Cercocebus_atys
ENSSPAG00000013996	-	67	55.556	ENSCLAG00000005228	RALYL	75	55.605	Chinchilla_lanigera
ENSSPAG00000013996	-	67	54.867	ENSCHOG00000013228	RALYL	75	51.082	Choloepus_hoffmanni
ENSSPAG00000013996	-	67	57.944	ENSCANG00000039144	RALYL	74	58.019	Colobus_angolensis_palliatus
ENSSPAG00000013996	-	67	55.310	ENSCGRG00001009241	Ralyl	75	55.357	Cricetulus_griseus_chok1gshd
ENSSPAG00000013996	-	79	90.400	ENSCSEG00000021349	-	82	87.121	Cynoglossus_semilaevis
ENSSPAG00000013996	-	70	77.679	ENSCSEG00000019769	-	75	75.446	Cynoglossus_semilaevis
ENSSPAG00000013996	-	100	86.154	ENSCVAG00000016981	-	100	87.077	Cyprinodon_variegatus
ENSSPAG00000013996	-	96	65.049	ENSCVAG00000002797	-	86	67.054	Cyprinodon_variegatus
ENSSPAG00000013996	-	83	80.989	ENSDARG00000103845	zgc:55733	99	73.482	Danio_rerio
ENSSPAG00000013996	-	78	80.162	ENSDARG00000053810	hnrnpc	99	71.875	Danio_rerio
ENSSPAG00000013996	-	67	56.195	ENSDORG00000003721	Ralyl	75	56.250	Dipodomys_ordii
ENSSPAG00000013996	-	52	56.322	ENSETEG00000014028	RALYL	82	59.259	Echinops_telfairi
ENSSPAG00000013996	-	84	41.304	ENSEBUG00000012363	hnrnpc	69	44.726	Eptatretus_burgeri
ENSSPAG00000013996	-	66	50.233	ENSEBUG00000006049	RALYL	74	47.887	Eptatretus_burgeri
ENSSPAG00000013996	-	67	55.752	ENSEEUG00000007202	RALYL	76	55.605	Erinaceus_europaeus
ENSSPAG00000013996	-	79	80.755	ENSELUG00000007714	-	93	76.727	Esox_lucius
ENSSPAG00000013996	-	96	79.421	ENSELUG00000004132	-	99	76.206	Esox_lucius
ENSSPAG00000013996	-	82	47.350	ENSFALG00000008647	RALYL	97	58.411	Ficedula_albicollis
ENSSPAG00000013996	-	87	76.868	ENSFHEG00000003605	-	86	76.226	Fundulus_heteroclitus
ENSSPAG00000013996	-	97	83.742	ENSFHEG00000007278	-	100	81.288	Fundulus_heteroclitus
ENSSPAG00000013996	-	66	59.813	ENSGALG00000036938	RALYL	75	56.250	Gallus_gallus
ENSSPAG00000013996	-	97	89.068	ENSGAFG00000020992	-	100	88.424	Gambusia_affinis
ENSSPAG00000013996	-	87	75.089	ENSGAFG00000020486	-	98	69.841	Gambusia_affinis
ENSSPAG00000013996	-	100	80.243	ENSGACG00000017772	-	97	91.633	Gasterosteus_aculeatus
ENSSPAG00000013996	-	69	76.606	ENSGACG00000018932	-	88	70.909	Gasterosteus_aculeatus
ENSSPAG00000013996	-	67	57.944	ENSGGOG00000000841	RALYL	74	58.019	Gorilla_gorilla
ENSSPAG00000013996	-	79	82.213	ENSHBUG00000018342	-	85	81.061	Haplochromis_burtoni
ENSSPAG00000013996	-	100	90.625	ENSHBUG00000010527	-	100	89.342	Haplochromis_burtoni
ENSSPAG00000013996	-	67	55.111	ENSHGLG00000004866	RALYL	75	55.157	Heterocephalus_glaber_female
ENSSPAG00000013996	-	67	55.111	ENSHGLG00100017480	RALYL	75	55.157	Heterocephalus_glaber_male
ENSSPAG00000013996	-	82	86.765	ENSHCOG00000012333	hnrnpc	91	86.643	Hippocampus_comes
ENSSPAG00000013996	-	83	80.682	ENSIPUG00000008666	zgc:55733	95	78.802	Ictalurus_punctatus
ENSSPAG00000013996	-	83	78.788	ENSIPUG00000011271	hnrnpc	99	78.696	Ictalurus_punctatus
ENSSPAG00000013996	-	67	55.752	ENSSTOG00000012583	RALYL	76	55.804	Ictidomys_tridecemlineatus
ENSSPAG00000013996	-	86	78.623	ENSKMAG00000011170	-	84	80.843	Kryptolebias_marmoratus
ENSSPAG00000013996	-	100	89.375	ENSKMAG00000018265	-	100	89.375	Kryptolebias_marmoratus
ENSSPAG00000013996	-	88	73.103	ENSLBEG00000024418	-	86	73.004	Labrus_bergylta
ENSSPAG00000013996	-	86	76.895	ENSLBEG00000006979	-	85	76.707	Labrus_bergylta
ENSSPAG00000013996	-	100	87.342	ENSLBEG00000006193	-	100	87.342	Labrus_bergylta
ENSSPAG00000013996	-	83	72.015	ENSLOCG00000002560	hnrnpc	91	71.004	Lepisosteus_oculatus
ENSSPAG00000013996	-	67	57.944	ENSMNEG00000033288	RALYL	74	58.019	Macaca_nemestrina
ENSSPAG00000013996	-	67	57.944	ENSMLEG00000038284	RALYL	74	58.019	Mandrillus_leucophaeus
ENSSPAG00000013996	-	84	95.489	ENSMAMG00000008033	-	100	92.500	Mastacembelus_armatus
ENSSPAG00000013996	-	79	84.980	ENSMAMG00000012236	-	84	83.333	Mastacembelus_armatus
ENSSPAG00000013996	-	100	91.562	ENSMZEG00005024249	-	100	89.655	Maylandia_zebra
ENSSPAG00000013996	-	79	81.818	ENSMZEG00005020460	-	88	80.000	Maylandia_zebra
ENSSPAG00000013996	-	67	55.310	ENSMAUG00000015149	Ralyl	75	55.357	Mesocricetus_auratus
ENSSPAG00000013996	-	66	57.746	ENSMICG00000005558	RALYL	80	75.949	Microcebus_murinus
ENSSPAG00000013996	-	66	55.804	ENSMOCG00000017371	Ralyl	75	55.357	Microtus_ochrogaster
ENSSPAG00000013996	-	90	90.753	ENSMMOG00000019520	-	100	86.986	Mola_mola
ENSSPAG00000013996	-	83	84.030	ENSMMOG00000021465	-	92	82.510	Mola_mola
ENSSPAG00000013996	-	84	90.566	ENSMALG00000014623	-	84	90.943	Monopterus_albus
ENSSPAG00000013996	-	80	76.863	ENSMALG00000007520	-	85	74.902	Monopterus_albus
ENSSPAG00000013996	-	67	54.867	ENSMUSG00000039717	Ralyl	93	74.684	Mus_musculus
ENSSPAG00000013996	-	66	57.143	ENSMPUG00000010724	RALYL	75	54.911	Mustela_putorius_furo
ENSSPAG00000013996	-	67	55.310	ENSNGAG00000013375	Ralyl	75	55.357	Nannospalax_galili
ENSSPAG00000013996	-	100	90.343	ENSNBRG00000015676	-	100	90.654	Neolamprologus_brichardi
ENSSPAG00000013996	-	81	82.558	ENSNBRG00000004912	-	94	80.702	Neolamprologus_brichardi
ENSSPAG00000013996	-	67	57.944	ENSNLEG00000002702	RALYL	71	58.019	Nomascus_leucogenys
ENSSPAG00000013996	-	57	51.813	ENSOPRG00000013650	-	98	49.215	Ochotona_princeps
ENSSPAG00000013996	-	82	48.763	ENSODEG00000001012	RALYL	75	55.157	Octodon_degus
ENSSPAG00000013996	-	79	83.004	ENSONIG00000007859	-	93	81.985	Oreochromis_niloticus
ENSSPAG00000013996	-	100	90.312	ENSONIG00000018350	-	100	89.028	Oreochromis_niloticus
ENSSPAG00000013996	-	100	85.542	ENSORLG00000003144	-	100	84.242	Oryzias_latipes
ENSSPAG00000013996	-	79	74.118	ENSORLG00000009999	-	85	71.429	Oryzias_latipes
ENSSPAG00000013996	-	79	73.725	ENSORLG00020018228	hnrnpc	85	71.053	Oryzias_latipes_hni
ENSSPAG00000013996	-	100	85.629	ENSORLG00015009460	-	100	86.228	Oryzias_latipes_hsok
ENSSPAG00000013996	-	79	74.118	ENSORLG00015019755	-	85	71.429	Oryzias_latipes_hsok
ENSSPAG00000013996	-	100	89.408	ENSOMEG00000022665	-	100	90.343	Oryzias_melastigma
ENSSPAG00000013996	-	79	75.686	ENSOMEG00000020488	-	85	72.932	Oryzias_melastigma
ENSSPAG00000013996	-	67	57.944	ENSPPAG00000038705	RALYL	74	58.019	Pan_paniscus
ENSSPAG00000013996	-	66	60.748	ENSPPRG00000018612	RALYL	74	58.411	Panthera_pardus
ENSSPAG00000013996	-	66	60.748	ENSPTIG00000020331	RALYL	74	58.411	Panthera_tigris_altaica
ENSSPAG00000013996	-	67	57.944	ENSPTRG00000020381	RALYL	74	58.019	Pan_troglodytes
ENSSPAG00000013996	-	67	57.944	ENSPANG00000029305	RALYL	74	58.019	Papio_anubis
ENSSPAG00000013996	-	84	80.515	ENSPKIG00000008592	-	100	76.758	Paramormyrops_kingsleyae
ENSSPAG00000013996	-	82	78.277	ENSPKIG00000022837	-	98	73.668	Paramormyrops_kingsleyae
ENSSPAG00000013996	-	67	56.637	ENSPSIG00000011135	RALYL	75	56.696	Pelodiscus_sinensis
ENSSPAG00000013996	-	68	80.093	ENSPMGG00000017774	-	96	64.502	Periophthalmus_magnuspinnatus
ENSSPAG00000013996	-	70	91.403	ENSPMGG00000013144	-	83	87.330	Periophthalmus_magnuspinnatus
ENSSPAG00000013996	-	67	55.310	ENSPEMG00000016447	Ralyl	75	55.357	Peromyscus_maniculatus_bairdii
ENSSPAG00000013996	-	67	53.744	ENSPMAG00000002407	RALYL	97	52.444	Petromyzon_marinus
ENSSPAG00000013996	-	87	75.357	ENSPFOG00000001583	-	98	71.429	Poecilia_formosa
ENSSPAG00000013996	-	100	88.785	ENSPFOG00000002643	-	100	87.850	Poecilia_formosa
ENSSPAG00000013996	-	100	88.509	ENSPLAG00000000061	-	100	86.957	Poecilia_latipinna
ENSSPAG00000013996	-	87	74.286	ENSPLAG00000015305	-	98	70.476	Poecilia_latipinna
ENSSPAG00000013996	-	87	76.868	ENSPMEG00000004802	-	98	71.429	Poecilia_mexicana
ENSSPAG00000013996	-	100	88.162	ENSPMEG00000016524	-	100	87.227	Poecilia_mexicana
ENSSPAG00000013996	-	79	76.772	ENSPREG00000007928	-	86	75.849	Poecilia_reticulata
ENSSPAG00000013996	-	84	92.424	ENSPREG00000001852	-	89	91.667	Poecilia_reticulata
ENSSPAG00000013996	-	67	47.867	ENSPPYG00000018710	-	63	71.154	Pongo_abelii
ENSSPAG00000013996	-	82	48.057	ENSPVAG00000010821	RALYL	78	53.191	Pteropus_vampyrus
ENSSPAG00000013996	-	81	82.946	ENSPNYG00000020293	-	87	81.395	Pundamilia_nyererei
ENSSPAG00000013996	-	84	93.258	ENSPNYG00000003747	-	90	93.258	Pundamilia_nyererei
ENSSPAG00000013996	-	78	81.301	ENSPNAG00000015686	hnrnpc	89	79.623	Pygocentrus_nattereri
ENSSPAG00000013996	-	83	75.836	ENSPNAG00000019200	zgc:55733	86	75.836	Pygocentrus_nattereri
ENSSPAG00000013996	-	67	57.944	ENSRROG00000023925	RALYL	82	74.074	Rhinopithecus_roxellana
ENSSPAG00000013996	-	84	76.384	ENSSFOG00015012015	-	95	74.923	Scleropages_formosus
ENSSPAG00000013996	-	88	77.700	ENSSFOG00015012924	-	80	96.203	Scleropages_formosus
ENSSPAG00000013996	-	79	80.237	ENSSMAG00000013592	-	99	73.585	Scophthalmus_maximus
ENSSPAG00000013996	-	100	87.462	ENSSMAG00000011147	-	100	88.379	Scophthalmus_maximus
ENSSPAG00000013996	-	87	81.429	ENSSDUG00000001723	-	98	77.389	Seriola_dumerili
ENSSPAG00000013996	-	100	94.969	ENSSDUG00000006730	-	100	94.969	Seriola_dumerili
ENSSPAG00000013996	-	85	83.026	ENSSLDG00000007454	-	86	83.712	Seriola_lalandi_dorsalis
ENSSPAG00000013996	-	90	94.406	ENSSLDG00000007474	-	98	94.406	Seriola_lalandi_dorsalis
ENSSPAG00000013996	-	82	48.057	ENSTGUG00000011689	RALYL	80	54.936	Taeniopygia_guttata
ENSSPAG00000013996	-	83	81.818	ENSTRUG00000020158	-	84	78.824	Takifugu_rubripes
ENSSPAG00000013996	-	80	81.081	ENSTNIG00000007427	-	84	80.695	Tetraodon_nigroviridis
ENSSPAG00000013996	-	80	80.709	ENSTNIG00000000334	-	94	78.927	Tetraodon_nigroviridis
ENSSPAG00000013996	-	67	49.345	ENSTBEG00000005551	RALYL	87	50.000	Tupaia_belangeri
ENSSPAG00000013996	-	66	54.795	ENSTTRG00000015762	RALYL	74	54.128	Tursiops_truncatus
ENSSPAG00000013996	-	66	54.460	ENSVPAG00000008501	RALYL	74	53.271	Vicugna_pacos
ENSSPAG00000013996	-	85	70.545	ENSXCOG00000006552	-	82	70.196	Xiphophorus_couchianus
ENSSPAG00000013996	-	84	93.182	ENSXMAG00000022849	-	86	92.424	Xiphophorus_maculatus
ENSSPAG00000013996	-	87	76.157	ENSXMAG00000009333	-	98	69.841	Xiphophorus_maculatus