EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000014266 (Gene tree)
Gene ID: 103356849
Gene Symbol: smg5
Alias: zgc:113841
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 24285 bases
Position: chrKK580296.1:36996-61280
Accession: 103356849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000018966	EST1	PF10374.9	1.9e-24	1	1
ENSSPAP00000019016	EST1	PF10374.9	2.8e-24	1	1
ENSSPAP00000019016	EST1_DNA_bind	PF10373.9	2.4e-40	1	1
ENSSPAP00000018966	EST1_DNA_bind	PF10373.9	1.2e-39	1	1
ENSSPAP00000019016	PIN_4	PF13638.6	6.1e-07	1	1
ENSSPAP00000018966	PIN_4	PF13638.6	6.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000019254	-	5536	XM_008281154	ENSSPAP00000018966	1128 (aa)	XP_008279376	UPI000495BB80
ENSSPAT00000019306	-	3066	-	ENSSPAP00000019016	1021 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000014266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000014266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000014266	smg5	99	65.351	ENSG00000198952	SMG5	91	76.581	Homo_sapiens
ENSSPAG00000014266	smg5	100	96.103	ENSAPOG00000019690	smg5	100	96.014	Acanthochromis_polyacanthus
ENSSPAG00000014266	smg5	91	77.037	ENSAMEG00000014458	SMG5	91	76.790	Ailuropoda_melanoleuca
ENSSPAG00000014266	smg5	98	87.294	ENSACIG00000001353	smg5	99	88.218	Amphilophus_citrinellus
ENSSPAG00000014266	smg5	100	95.745	ENSAOCG00000019483	smg5	100	95.833	Amphiprion_ocellaris
ENSSPAG00000014266	smg5	100	95.745	ENSAPEG00000022949	smg5	100	95.833	Amphiprion_percula
ENSSPAG00000014266	smg5	100	91.512	ENSATEG00000005348	smg5	100	90.708	Anabas_testudineus
ENSSPAG00000014266	smg5	97	64.880	ENSAPLG00000010263	SMG5	100	65.143	Anas_platyrhynchos
ENSSPAG00000014266	smg5	99	64.430	ENSANAG00000032899	SMG5	91	76.581	Aotus_nancymaae
ENSSPAG00000014266	smg5	100	91.086	ENSACLG00000009311	smg5	100	91.166	Astatotilapia_calliptera
ENSSPAG00000014266	smg5	100	79.222	ENSAMXG00000024616	smg5	100	77.924	Astyanax_mexicanus
ENSSPAG00000014266	smg5	99	65.019	ENSBTAG00000009435	SMG5	92	76.389	Bos_taurus
ENSSPAG00000014266	smg5	86	50.122	ENSBTAG00000021747	-	85	49.879	Bos_taurus
ENSSPAG00000014266	smg5	99	64.717	ENSCJAG00000005684	SMG5	91	76.581	Callithrix_jacchus
ENSSPAG00000014266	smg5	98	65.340	ENSCAFG00000016839	SMG5	91	77.123	Canis_familiaris
ENSSPAG00000014266	smg5	98	65.340	ENSCAFG00020006061	SMG5	91	77.123	Canis_lupus_dingo
ENSSPAG00000014266	smg5	86	50.495	ENSCHIG00000006323	-	93	49.877	Capra_hircus
ENSSPAG00000014266	smg5	99	65.184	ENSCHIG00000007709	SMG5	99	66.152	Capra_hircus
ENSSPAG00000014266	smg5	98	65.664	ENSTSYG00000004099	SMG5	93	74.382	Carlito_syrichta
ENSSPAG00000014266	smg5	95	50.067	ENSCAPG00000003631	SMG5	82	71.698	Cavia_aperea
ENSSPAG00000014266	smg5	98	65.058	ENSCPOG00000015696	SMG5	91	76.347	Cavia_porcellus
ENSSPAG00000014266	smg5	99	64.717	ENSCCAG00000027409	SMG5	92	75.694	Cebus_capucinus
ENSSPAG00000014266	smg5	99	65.448	ENSCATG00000030539	SMG5	92	75.926	Cercocebus_atys
ENSSPAG00000014266	smg5	99	64.306	ENSCLAG00000003983	SMG5	91	76.815	Chinchilla_lanigera
ENSSPAG00000014266	smg5	99	65.448	ENSCSAG00000002120	SMG5	91	76.815	Chlorocebus_sabaeus
ENSSPAG00000014266	smg5	53	76.173	ENSCHOG00000008741	-	57	76.173	Choloepus_hoffmanni
ENSSPAG00000014266	smg5	93	65.040	ENSCPBG00000025848	SMG5	100	65.020	Chrysemys_picta_bellii
ENSSPAG00000014266	smg5	92	32.861	ENSCING00000008706	-	98	32.190	Ciona_intestinalis
ENSSPAG00000014266	smg5	99	62.079	ENSCANG00000029208	SMG5	91	77.283	Colobus_angolensis_palliatus
ENSSPAG00000014266	smg5	98	65.500	ENSCGRG00001006336	Smg5	91	76.179	Cricetulus_griseus_chok1gshd
ENSSPAG00000014266	smg5	98	65.500	ENSCGRG00000005111	Smg5	91	76.296	Cricetulus_griseus_crigri
ENSSPAG00000014266	smg5	100	86.903	ENSCSEG00000014220	smg5	100	86.372	Cynoglossus_semilaevis
ENSSPAG00000014266	smg5	98	80.339	ENSCVAG00000000529	smg5	99	80.539	Cyprinodon_variegatus
ENSSPAG00000014266	smg5	100	78.257	ENSDARG00000041481	smg5	100	77.573	Danio_rerio
ENSSPAG00000014266	smg5	92	32.700	ENSDNOG00000039862	-	86	39.237	Dasypus_novemcinctus
ENSSPAG00000014266	smg5	88	78.215	ENSDNOG00000000051	SMG5	87	77.105	Dasypus_novemcinctus
ENSSPAG00000014266	smg5	98	65.322	ENSDORG00000010382	Smg5	93	75.395	Dipodomys_ordii
ENSSPAG00000014266	smg5	57	30.890	FBgn0019890	Smg5	65	30.890	Drosophila_melanogaster
ENSSPAG00000014266	smg5	75	85.437	ENSETEG00000010336	SMG5	80	85.437	Echinops_telfairi
ENSSPAG00000014266	smg5	90	45.784	ENSEBUG00000003739	smg5	98	46.146	Eptatretus_burgeri
ENSSPAG00000014266	smg5	98	65.598	ENSEASG00005019122	SMG5	91	77.283	Equus_asinus_asinus
ENSSPAG00000014266	smg5	98	65.500	ENSECAG00000001389	SMG5	92	76.389	Equus_caballus
ENSSPAG00000014266	smg5	72	78.431	ENSEEUG00000012690	SMG5	75	77.591	Erinaceus_europaeus
ENSSPAG00000014266	smg5	100	81.778	ENSELUG00000012585	smg5	100	80.247	Esox_lucius
ENSSPAG00000014266	smg5	98	65.162	ENSFCAG00000011783	SMG5	92	75.751	Felis_catus
ENSSPAG00000014266	smg5	57	68.687	ENSFALG00000001166	-	96	67.617	Ficedula_albicollis
ENSSPAG00000014266	smg5	97	65.059	ENSFDAG00000017388	SMG5	92	76.829	Fukomys_damarensis
ENSSPAG00000014266	smg5	98	78.378	ENSFHEG00000013939	smg5	94	91.429	Fundulus_heteroclitus
ENSSPAG00000014266	smg5	100	79.773	ENSGMOG00000007310	smg5	100	78.727	Gadus_morhua
ENSSPAG00000014266	smg5	99	63.628	ENSGALG00000029918	-	99	64.038	Gallus_gallus
ENSSPAG00000014266	smg5	93	90.096	ENSGAFG00000021691	smg5	99	90.096	Gambusia_affinis
ENSSPAG00000014266	smg5	100	87.390	ENSGACG00000013142	smg5	100	85.626	Gasterosteus_aculeatus
ENSSPAG00000014266	smg5	99	65.047	ENSGAGG00000016131	SMG5	99	65.023	Gopherus_agassizii
ENSSPAG00000014266	smg5	99	65.159	ENSGGOG00000010932	SMG5	91	76.581	Gorilla_gorilla
ENSSPAG00000014266	smg5	100	91.166	ENSHBUG00000008654	smg5	100	91.512	Haplochromis_burtoni
ENSSPAG00000014266	smg5	98	65.856	ENSHGLG00000019152	SMG5	92	76.212	Heterocephalus_glaber_female
ENSSPAG00000014266	smg5	88	66.738	ENSHGLG00100015948	SMG5	91	76.224	Heterocephalus_glaber_male
ENSSPAG00000014266	smg5	88	81.422	ENSHCOG00000010229	smg5	97	80.505	Hippocampus_comes
ENSSPAG00000014266	smg5	100	78.122	ENSIPUG00000006624	Smg5	100	76.855	Ictalurus_punctatus
ENSSPAG00000014266	smg5	99	64.865	ENSSTOG00000001780	SMG5	92	75.926	Ictidomys_tridecemlineatus
ENSSPAG00000014266	smg5	98	65.922	ENSJJAG00000022763	Smg5	93	73.933	Jaculus_jaculus
ENSSPAG00000014266	smg5	100	91.489	ENSKMAG00000014586	smg5	100	92.021	Kryptolebias_marmoratus
ENSSPAG00000014266	smg5	100	91.223	ENSLBEG00000002145	smg5	100	91.755	Labrus_bergylta
ENSSPAG00000014266	smg5	99	57.621	ENSLACG00000010521	SMG5	97	59.923	Latimeria_chalumnae
ENSSPAG00000014266	smg5	100	69.075	ENSLOCG00000008380	smg5	99	71.488	Lepisosteus_oculatus
ENSSPAG00000014266	smg5	98	65.366	ENSLAFG00000006241	SMG5	92	76.457	Loxodonta_africana
ENSSPAG00000014266	smg5	99	65.448	ENSMFAG00000045357	SMG5	91	76.815	Macaca_fascicularis
ENSSPAG00000014266	smg5	93	77.752	ENSMMUG00000000090	SMG5	92	76.815	Macaca_mulatta
ENSSPAG00000014266	smg5	99	65.351	ENSMNEG00000044425	SMG5	91	76.815	Macaca_nemestrina
ENSSPAG00000014266	smg5	99	60.115	ENSMLEG00000041192	SMG5	99	60.231	Mandrillus_leucophaeus
ENSSPAG00000014266	smg5	100	90.796	ENSMAMG00000010683	smg5	100	90.531	Mastacembelus_armatus
ENSSPAG00000014266	smg5	98	84.525	ENSMZEG00005015815	smg5	99	84.721	Maylandia_zebra
ENSSPAG00000014266	smg5	61	84.985	ENSMZEG00005016543	smg5	100	84.839	Maylandia_zebra
ENSSPAG00000014266	smg5	98	65.500	ENSMAUG00000010381	Smg5	91	75.943	Mesocricetus_auratus
ENSSPAG00000014266	smg5	55	41.652	ENSMAUG00000000043	-	73	48.585	Mesocricetus_auratus
ENSSPAG00000014266	smg5	98	65.175	ENSMICG00000002257	SMG5	91	77.123	Microcebus_murinus
ENSSPAG00000014266	smg5	99	64.649	ENSMOCG00000016590	Smg5	91	76.179	Microtus_ochrogaster
ENSSPAG00000014266	smg5	100	86.231	ENSMMOG00000017199	smg5	100	86.496	Mola_mola
ENSSPAG00000014266	smg5	76	33.842	ENSMODG00000010675	-	88	34.351	Monodelphis_domestica
ENSSPAG00000014266	smg5	75	34.771	ENSMODG00000004735	-	86	34.771	Monodelphis_domestica
ENSSPAG00000014266	smg5	97	30.647	ENSMODG00000004511	-	81	34.204	Monodelphis_domestica
ENSSPAG00000014266	smg5	76	36.434	ENSMODG00000004532	-	91	33.929	Monodelphis_domestica
ENSSPAG00000014266	smg5	87	64.699	ENSMODG00000016901	SMG5	99	64.418	Monodelphis_domestica
ENSSPAG00000014266	smg5	100	89.805	ENSMALG00000010375	smg5	100	89.716	Monopterus_albus
ENSSPAG00000014266	smg5	98	65.243	MGP_CAROLIEiJ_G0025163	Smg5	100	88.827	Mus_caroli
ENSSPAG00000014266	smg5	98	65.373	ENSMUSG00000001415	Smg5	99	88.827	Mus_musculus
ENSSPAG00000014266	smg5	98	65.150	MGP_PahariEiJ_G0026606	Smg5	100	89.385	Mus_pahari
ENSSPAG00000014266	smg5	98	65.276	MGP_SPRETEiJ_G0026104	Smg5	100	88.827	Mus_spretus
ENSSPAG00000014266	smg5	93	64.153	ENSMPUG00000004546	SMG5	100	64.499	Mustela_putorius_furo
ENSSPAG00000014266	smg5	98	65.598	ENSMLUG00000008518	SMG5	99	65.628	Myotis_lucifugus
ENSSPAG00000014266	smg5	99	65.734	ENSNGAG00000020706	Smg5	91	76.168	Nannospalax_galili
ENSSPAG00000014266	smg5	97	39.427	ENSNGAG00000012101	-	98	39.181	Nannospalax_galili
ENSSPAG00000014266	smg5	95	83.848	ENSNBRG00000004332	smg5	96	84.074	Neolamprologus_brichardi
ENSSPAG00000014266	smg5	99	65.351	ENSNLEG00000012439	SMG5	91	76.815	Nomascus_leucogenys
ENSSPAG00000014266	smg5	98	64.390	ENSMEUG00000012834	SMG5	99	64.210	Notamacropus_eugenii
ENSSPAG00000014266	smg5	99	65.063	ENSOPRG00000009152	SMG5	92	76.443	Ochotona_princeps
ENSSPAG00000014266	smg5	99	65.284	ENSODEG00000012237	SMG5	92	76.674	Octodon_degus
ENSSPAG00000014266	smg5	100	91.593	ENSONIG00000008632	smg5	100	91.947	Oreochromis_niloticus
ENSSPAG00000014266	smg5	89	36.570	ENSOCUG00000023338	-	90	45.025	Oryctolagus_cuniculus
ENSSPAG00000014266	smg5	97	65.815	ENSOCUG00000012886	SMG5	92	76.642	Oryctolagus_cuniculus
ENSSPAG00000014266	smg5	100	85.638	ENSORLG00000016239	smg5	100	86.348	Oryzias_latipes
ENSSPAG00000014266	smg5	100	85.562	ENSORLG00020013127	smg5	100	86.170	Oryzias_latipes_hni
ENSSPAG00000014266	smg5	100	85.284	ENSORLG00015019014	smg5	100	86.348	Oryzias_latipes_hsok
ENSSPAG00000014266	smg5	84	85.639	ENSOMEG00000021330	smg5	93	85.610	Oryzias_melastigma
ENSSPAG00000014266	smg5	98	64.272	ENSOGAG00000004966	SMG5	93	74.382	Otolemur_garnettii
ENSSPAG00000014266	smg5	97	39.921	ENSOARG00000011963	-	93	50.120	Ovis_aries
ENSSPAG00000014266	smg5	99	65.087	ENSOARG00000005778	SMG5	92	76.620	Ovis_aries
ENSSPAG00000014266	smg5	99	65.255	ENSPPAG00000011996	SMG5	91	76.347	Pan_paniscus
ENSSPAG00000014266	smg5	97	65.839	ENSPPRG00000011901	SMG5	92	76.847	Panthera_pardus
ENSSPAG00000014266	smg5	96	62.715	ENSPTIG00000007892	SMG5	87	74.568	Panthera_tigris_altaica
ENSSPAG00000014266	smg5	99	65.255	ENSPTRG00000049282	-	91	76.347	Pan_troglodytes
ENSSPAG00000014266	smg5	99	65.255	ENSPTRG00000023925	SMG5	91	76.347	Pan_troglodytes
ENSSPAG00000014266	smg5	99	65.448	ENSPANG00000011201	SMG5	91	76.815	Papio_anubis
ENSSPAG00000014266	smg5	100	76.253	ENSPKIG00000009402	smg5	100	76.241	Paramormyrops_kingsleyae
ENSSPAG00000014266	smg5	97	66.957	ENSPSIG00000015198	SMG5	100	66.538	Pelodiscus_sinensis
ENSSPAG00000014266	smg5	100	72.414	ENSPMGG00000010465	smg5	100	71.982	Periophthalmus_magnuspinnatus
ENSSPAG00000014266	smg5	56	40.508	ENSPEMG00000010022	-	68	50.123	Peromyscus_maniculatus_bairdii
ENSSPAG00000014266	smg5	98	65.598	ENSPEMG00000001819	Smg5	91	76.415	Peromyscus_maniculatus_bairdii
ENSSPAG00000014266	smg5	97	48.842	ENSPMAG00000000410	smg5	91	62.439	Petromyzon_marinus
ENSSPAG00000014266	smg5	98	65.268	ENSPCIG00000018938	SMG5	99	65.179	Phascolarctos_cinereus
ENSSPAG00000014266	smg5	100	88.741	ENSPFOG00000010191	smg5	100	88.652	Poecilia_formosa
ENSSPAG00000014266	smg5	100	88.564	ENSPLAG00000009332	smg5	100	88.652	Poecilia_latipinna
ENSSPAG00000014266	smg5	100	88.830	ENSPMEG00000014105	smg5	100	88.741	Poecilia_mexicana
ENSSPAG00000014266	smg5	100	89.096	ENSPREG00000017713	smg5	100	89.539	Poecilia_reticulata
ENSSPAG00000014266	smg5	99	65.351	ENSPPYG00000000723	SMG5	91	76.581	Pongo_abelii
ENSSPAG00000014266	smg5	77	80.556	ENSPCAG00000008412	SMG5	75	88.827	Procavia_capensis
ENSSPAG00000014266	smg5	98	65.437	ENSPCOG00000004741	SMG5	91	77.358	Propithecus_coquereli
ENSSPAG00000014266	smg5	93	65.105	ENSPVAG00000016748	SMG5	99	58.074	Pteropus_vampyrus
ENSSPAG00000014266	smg5	100	90.845	ENSPNYG00000013397	smg5	100	90.661	Pundamilia_nyererei
ENSSPAG00000014266	smg5	100	79.541	ENSPNAG00000028363	smg5	100	79.204	Pygocentrus_nattereri
ENSSPAG00000014266	smg5	98	65.470	ENSRNOG00000019590	Smg5	92	75.349	Rattus_norvegicus
ENSSPAG00000014266	smg5	99	65.351	ENSRBIG00000027428	SMG5	91	77.049	Rhinopithecus_bieti
ENSSPAG00000014266	smg5	99	65.255	ENSRROG00000030035	SMG5	91	77.049	Rhinopithecus_roxellana
ENSSPAG00000014266	smg5	99	64.813	ENSSBOG00000033339	SMG5	91	76.815	Saimiri_boliviensis_boliviensis
ENSSPAG00000014266	smg5	78	34.895	ENSSHAG00000000561	-	87	36.548	Sarcophilus_harrisii
ENSSPAG00000014266	smg5	96	32.118	ENSSHAG00000009572	-	80	41.019	Sarcophilus_harrisii
ENSSPAG00000014266	smg5	55	36.598	ENSSHAG00000000935	-	83	36.598	Sarcophilus_harrisii
ENSSPAG00000014266	smg5	97	65.392	ENSSHAG00000014163	SMG5	100	65.137	Sarcophilus_harrisii
ENSSPAG00000014266	smg5	100	77.680	ENSSFOG00015024175	smg5	99	78.244	Scleropages_formosus
ENSSPAG00000014266	smg5	100	92.028	ENSSMAG00000013059	smg5	100	91.940	Scophthalmus_maximus
ENSSPAG00000014266	smg5	100	93.993	ENSSDUG00000007122	smg5	100	93.816	Seriola_dumerili
ENSSPAG00000014266	smg5	100	93.192	ENSSLDG00000011418	smg5	100	93.634	Seriola_lalandi_dorsalis
ENSSPAG00000014266	smg5	85	70.863	ENSSARG00000012484	SMG5	99	58.235	Sorex_araneus
ENSSPAG00000014266	smg5	93	63.952	ENSSPUG00000002260	SMG5	100	64.363	Sphenodon_punctatus
ENSSPAG00000014266	smg5	91	60.052	ENSSSCG00000039308	-	96	52.875	Sus_scrofa
ENSSPAG00000014266	smg5	98	65.403	ENSSSCG00000006490	-	91	77.198	Sus_scrofa
ENSSPAG00000014266	smg5	98	67.052	ENSTGUG00000003748	-	99	66.089	Taeniopygia_guttata
ENSSPAG00000014266	smg5	100	82.244	ENSTRUG00000012580	smg5	100	81.714	Takifugu_rubripes
ENSSPAG00000014266	smg5	100	82.482	ENSTNIG00000010303	smg5	100	81.954	Tetraodon_nigroviridis
ENSSPAG00000014266	smg5	57	84.729	ENSTBEG00000002777	SMG5	58	84.729	Tupaia_belangeri
ENSSPAG00000014266	smg5	94	63.581	ENSTTRG00000001401	SMG5	92	70.370	Tursiops_truncatus
ENSSPAG00000014266	smg5	99	63.822	ENSUAMG00000013721	SMG5	91	76.832	Ursus_americanus
ENSSPAG00000014266	smg5	92	73.253	ENSUMAG00000018041	SMG5	97	70.536	Ursus_maritimus
ENSSPAG00000014266	smg5	92	70.792	ENSVPAG00000009446	SMG5	91	66.914	Vicugna_pacos
ENSSPAG00000014266	smg5	98	65.209	ENSVVUG00000005887	SMG5	91	77.123	Vulpes_vulpes
ENSSPAG00000014266	smg5	76	57.683	ENSXETG00000033791	SMG5	95	57.452	Xenopus_tropicalis
ENSSPAG00000014266	smg5	92	90.811	ENSXCOG00000004379	smg5	100	90.811	Xiphophorus_couchianus
ENSSPAG00000014266	smg5	100	88.032	ENSXMAG00000013499	smg5	100	88.475	Xiphophorus_maculatus