EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000014453 (Gene tree)
Gene ID: 103364803
Gene Symbol: -
Alias: -
Full Name: polyadenylate-binding protein 1-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 5573 bases
Position: chrKK580089.1:855967-861539
Accession: 103364803
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000019158	PABP	PF00658.18	6.4e-32	1	1
ENSSPAP00000019158	RRM_5	PF13893.6	3.8e-08	1	2
ENSSPAP00000019158	RRM_5	PF13893.6	3.8e-08	2	2
ENSSPAP00000019158	RRM_1	PF00076.22	4.1e-93	1	4
ENSSPAP00000019158	RRM_1	PF00076.22	4.1e-93	2	4
ENSSPAP00000019158	RRM_1	PF00076.22	4.1e-93	3	4
ENSSPAP00000019158	RRM_1	PF00076.22	4.1e-93	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000019449	-	2439	XM_008292065	ENSSPAP00000019158	635 (aa)	XP_008290287	UPI000496FB4E

Gene Model

Click here to download ENSSPAG00000014453's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000014453's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000014453	-	55	36.634	ENSSPAG00000021838	celf5a	83	35.616
ENSSPAG00000014453	-	59	37.349	ENSSPAG00000002388	ELAVL2	92	37.349
ENSSPAG00000014453	-	98	76.115	ENSSPAG00000009252	pabpc4	96	83.962
ENSSPAG00000014453	-	52	35.526	ENSSPAG00000007458	-	55	37.500
ENSSPAG00000014453	-	85	75.000	ENSSPAG00000017137	pabpc1l	96	75.000
ENSSPAG00000014453	-	57	36.000	ENSSPAG00000018685	rbm19	66	36.000
ENSSPAG00000014453	-	59	36.145	ENSSPAG00000018867	elavl4	85	36.145
ENSSPAG00000014453	-	59	33.684	ENSSPAG00000022418	rbms2b	51	33.684
ENSSPAG00000014453	-	100	90.596	ENSSPAG00000019265	pabpc1b	100	90.267

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000014453	-	58	80.102	ENSG00000184388	PABPC1L2B	98	80.102	Homo_sapiens
ENSSPAG00000014453	-	58	80.102	ENSG00000186288	PABPC1L2A	98	80.102	Homo_sapiens
ENSSPAG00000014453	-	100	90.596	ENSAPOG00000017776	pabpc1b	100	90.439	Acanthochromis_polyacanthus
ENSSPAG00000014453	-	100	99.528	ENSAPOG00000015105	pabpc1a	100	99.528	Acanthochromis_polyacanthus
ENSSPAG00000014453	-	58	80.102	ENSAMEG00000019441	-	98	80.102	Ailuropoda_melanoleuca
ENSSPAG00000014453	-	100	98.740	ENSACIG00000004685	pabpc1a	100	98.740	Amphilophus_citrinellus
ENSSPAG00000014453	-	100	86.072	ENSACIG00000018366	pabpc1b	100	85.915	Amphilophus_citrinellus
ENSSPAG00000014453	-	100	90.125	ENSAOCG00000019839	pabpc1b	100	89.969	Amphiprion_ocellaris
ENSSPAG00000014453	-	100	99.370	ENSAOCG00000011656	pabpc1a	100	99.370	Amphiprion_ocellaris
ENSSPAG00000014453	-	100	90.125	ENSAPEG00000010435	pabpc1b	100	89.969	Amphiprion_percula
ENSSPAG00000014453	-	100	99.370	ENSAPEG00000006963	pabpc1a	100	99.370	Amphiprion_percula
ENSSPAG00000014453	-	100	99.055	ENSATEG00000024852	pabpc1a	100	99.055	Anabas_testudineus
ENSSPAG00000014453	-	100	89.671	ENSATEG00000012917	pabpc1b	100	89.671	Anabas_testudineus
ENSSPAG00000014453	-	58	80.102	ENSANAG00000019431	-	98	80.102	Aotus_nancymaae
ENSSPAG00000014453	-	58	80.102	ENSANAG00000019429	-	98	80.102	Aotus_nancymaae
ENSSPAG00000014453	-	100	98.268	ENSACLG00000009399	pabpc1a	100	98.268	Astatotilapia_calliptera
ENSSPAG00000014453	-	100	89.342	ENSACLG00000014335	pabpc1b	100	89.185	Astatotilapia_calliptera
ENSSPAG00000014453	-	100	90.282	ENSAMXG00000008599	pabpc1b	100	90.125	Astyanax_mexicanus
ENSSPAG00000014453	-	59	77.033	ENSBTAG00000052491	-	98	77.033	Bos_taurus
ENSSPAG00000014453	-	59	79.024	ENSBTAG00000050902	-	98	79.024	Bos_taurus
ENSSPAG00000014453	-	58	80.102	ENSCJAG00000041326	-	98	80.102	Callithrix_jacchus
ENSSPAG00000014453	-	59	79.024	ENSCAFG00020002052	-	98	79.024	Canis_lupus_dingo
ENSSPAG00000014453	-	58	80.102	ENSCHIG00000006283	-	98	80.102	Capra_hircus
ENSSPAG00000014453	-	58	80.102	ENSCHIG00000011138	-	98	80.102	Capra_hircus
ENSSPAG00000014453	-	58	80.102	ENSTSYG00000001775	-	98	80.102	Carlito_syrichta
ENSSPAG00000014453	-	58	80.102	ENSCPOG00000009525	-	98	80.102	Cavia_porcellus
ENSSPAG00000014453	-	58	80.102	ENSCCAG00000031524	-	98	80.102	Cebus_capucinus
ENSSPAG00000014453	-	58	80.102	ENSCATG00000043125	-	98	80.102	Cercocebus_atys
ENSSPAG00000014453	-	58	80.102	ENSCATG00000042826	-	98	80.102	Cercocebus_atys
ENSSPAG00000014453	-	58	78.061	ENSCLAG00000017409	-	98	78.061	Chinchilla_lanigera
ENSSPAG00000014453	-	58	78.061	ENSCLAG00000017412	-	98	78.061	Chinchilla_lanigera
ENSSPAG00000014453	-	58	80.102	ENSCSAG00000000102	-	98	80.102	Chlorocebus_sabaeus
ENSSPAG00000014453	-	57	80.110	ENSCGRG00001023387	-	96	77.436	Cricetulus_griseus_chok1gshd
ENSSPAG00000014453	-	99	97.943	ENSCSEG00000013324	pabpc1a	100	97.943	Cynoglossus_semilaevis
ENSSPAG00000014453	-	100	89.028	ENSCSEG00000015241	-	100	89.028	Cynoglossus_semilaevis
ENSSPAG00000014453	-	100	88.106	ENSCVAG00000005489	pabpc1b	100	87.950	Cyprinodon_variegatus
ENSSPAG00000014453	-	100	98.110	ENSCVAG00000021872	pabpc1a	100	98.110	Cyprinodon_variegatus
ENSSPAG00000014453	-	100	91.693	ENSDARG00000017219	pabpc1a	100	91.693	Danio_rerio
ENSSPAG00000014453	-	100	89.812	ENSDARG00000021140	pabpc1b	99	92.199	Danio_rerio
ENSSPAG00000014453	-	58	80.423	ENSDNOG00000030926	-	98	78.571	Dasypus_novemcinctus
ENSSPAG00000014453	-	58	77.551	ENSDORG00000011362	-	98	77.551	Dipodomys_ordii
ENSSPAG00000014453	-	59	78.641	ENSEASG00005010399	-	98	78.641	Equus_asinus_asinus
ENSSPAG00000014453	-	59	78.641	ENSECAG00000002620	-	98	78.641	Equus_caballus
ENSSPAG00000014453	-	59	76.020	ENSEEUG00000008203	-	98	76.020	Erinaceus_europaeus
ENSSPAG00000014453	-	100	88.906	ENSELUG00000015062	-	100	88.750	Esox_lucius
ENSSPAG00000014453	-	59	58.621	ENSELUG00000005389	-	97	58.621	Esox_lucius
ENSSPAG00000014453	-	99	94.340	ENSELUG00000003614	pabpc1a	100	94.340	Esox_lucius
ENSSPAG00000014453	-	58	80.102	ENSFCAG00000039701	-	98	80.102	Felis_catus
ENSSPAG00000014453	-	58	80.102	ENSFDAG00000005484	-	98	80.102	Fukomys_damarensis
ENSSPAG00000014453	-	100	89.342	ENSFHEG00000008186	pabpc1b	100	89.498	Fundulus_heteroclitus
ENSSPAG00000014453	-	100	98.110	ENSFHEG00000018979	pabpc1a	100	98.110	Fundulus_heteroclitus
ENSSPAG00000014453	-	100	80.775	ENSGMOG00000002448	-	100	79.601	Gadus_morhua
ENSSPAG00000014453	-	99	93.818	ENSGMOG00000013448	pabpc1a	99	93.663	Gadus_morhua
ENSSPAG00000014453	-	100	90.282	ENSGAFG00000010193	pabpc1b	100	90.439	Gambusia_affinis
ENSSPAG00000014453	-	100	97.480	ENSGAFG00000019750	pabpc1a	100	97.480	Gambusia_affinis
ENSSPAG00000014453	-	100	97.795	ENSGACG00000003572	pabpc1a	100	97.795	Gasterosteus_aculeatus
ENSSPAG00000014453	-	100	88.372	ENSGACG00000003771	pabpc1b	100	88.372	Gasterosteus_aculeatus
ENSSPAG00000014453	-	58	80.102	ENSGGOG00000038606	-	98	80.102	Gorilla_gorilla
ENSSPAG00000014453	-	58	80.102	ENSGGOG00000043933	-	98	80.102	Gorilla_gorilla
ENSSPAG00000014453	-	100	89.342	ENSHBUG00000002075	pabpc1b	100	89.185	Haplochromis_burtoni
ENSSPAG00000014453	-	100	98.268	ENSHBUG00000020487	pabpc1a	100	98.268	Haplochromis_burtoni
ENSSPAG00000014453	-	58	79.082	ENSHGLG00000019668	-	98	79.082	Heterocephalus_glaber_female
ENSSPAG00000014453	-	58	79.082	ENSHGLG00000019762	-	98	79.082	Heterocephalus_glaber_female
ENSSPAG00000014453	-	58	79.082	ENSHGLG00100020854	-	98	79.082	Heterocephalus_glaber_male
ENSSPAG00000014453	-	100	98.898	ENSHCOG00000013502	pabpc1a	100	98.898	Hippocampus_comes
ENSSPAG00000014453	-	98	68.998	ENSHCOG00000003175	pabpc1b	99	69.440	Hippocampus_comes
ENSSPAG00000014453	-	100	84.458	ENSIPUG00000010791	-	100	84.301	Ictalurus_punctatus
ENSSPAG00000014453	-	81	56.716	ENSIPUG00000018724	-	79	56.716	Ictalurus_punctatus
ENSSPAG00000014453	-	75	55.509	ENSIPUG00000021244	-	65	55.509	Ictalurus_punctatus
ENSSPAG00000014453	-	100	90.551	ENSIPUG00000008848	pabpc1a	100	90.551	Ictalurus_punctatus
ENSSPAG00000014453	-	58	79.592	ENSSTOG00000026028	-	98	79.592	Ictidomys_tridecemlineatus
ENSSPAG00000014453	-	58	79.592	ENSSTOG00000022096	-	98	79.592	Ictidomys_tridecemlineatus
ENSSPAG00000014453	-	58	78.571	ENSJJAG00000007037	-	98	78.571	Jaculus_jaculus
ENSSPAG00000014453	-	100	88.994	ENSKMAG00000008049	pabpc1b	100	89.151	Kryptolebias_marmoratus
ENSSPAG00000014453	-	100	98.425	ENSKMAG00000000605	pabpc1a	100	98.425	Kryptolebias_marmoratus
ENSSPAG00000014453	-	100	97.953	ENSLBEG00000024002	-	100	97.953	Labrus_bergylta
ENSSPAG00000014453	-	100	89.342	ENSLBEG00000026845	pabpc1b	100	89.011	Labrus_bergylta
ENSSPAG00000014453	-	58	78.974	ENSLAFG00000023096	-	98	78.974	Loxodonta_africana
ENSSPAG00000014453	-	58	79.695	ENSMFAG00000028878	-	98	79.695	Macaca_fascicularis
ENSSPAG00000014453	-	58	80.102	ENSMMUG00000037681	-	98	80.102	Macaca_mulatta
ENSSPAG00000014453	-	58	80.102	ENSMMUG00000039929	-	98	80.102	Macaca_mulatta
ENSSPAG00000014453	-	58	80.102	ENSMMUG00000009740	-	98	80.102	Macaca_mulatta
ENSSPAG00000014453	-	58	80.102	ENSMNEG00000037732	-	98	80.102	Macaca_nemestrina
ENSSPAG00000014453	-	58	80.102	ENSMLEG00000027495	-	98	80.102	Mandrillus_leucophaeus
ENSSPAG00000014453	-	100	98.740	ENSMAMG00000004502	-	100	98.740	Mastacembelus_armatus
ENSSPAG00000014453	-	100	89.655	ENSMAMG00000014610	pabpc1b	100	89.812	Mastacembelus_armatus
ENSSPAG00000014453	-	100	89.342	ENSMZEG00005026745	pabpc1b	100	89.185	Maylandia_zebra
ENSSPAG00000014453	-	100	98.268	ENSMZEG00005025416	pabpc1a	100	98.268	Maylandia_zebra
ENSSPAG00000014453	-	58	80.102	ENSMICG00000047642	-	98	80.102	Microcebus_murinus
ENSSPAG00000014453	-	100	84.458	ENSMMOG00000018009	pabpc1b	100	84.458	Mola_mola
ENSSPAG00000014453	-	100	95.938	ENSMMOG00000018044	pabpc1a	100	95.938	Mola_mola
ENSSPAG00000014453	-	98	72.843	ENSMODG00000013156	-	98	73.003	Monodelphis_domestica
ENSSPAG00000014453	-	99	66.041	ENSMODG00000015024	-	99	65.674	Monodelphis_domestica
ENSSPAG00000014453	-	100	83.203	ENSMALG00000006066	pabpc1b	100	85.086	Monopterus_albus
ENSSPAG00000014453	-	100	98.583	ENSMALG00000013020	-	100	98.583	Monopterus_albus
ENSSPAG00000014453	-	58	81.967	ENSNGAG00000012688	-	98	78.571	Nannospalax_galili
ENSSPAG00000014453	-	100	98.425	ENSNBRG00000003068	-	100	98.425	Neolamprologus_brichardi
ENSSPAG00000014453	-	100	89.342	ENSNBRG00000013737	pabpc1b	100	89.185	Neolamprologus_brichardi
ENSSPAG00000014453	-	58	80.102	ENSNLEG00000018128	-	98	80.102	Nomascus_leucogenys
ENSSPAG00000014453	-	58	79.592	ENSODEG00000018540	-	98	79.592	Octodon_degus
ENSSPAG00000014453	-	100	97.795	ENSONIG00000006871	-	100	97.795	Oreochromis_niloticus
ENSSPAG00000014453	-	100	89.498	ENSONIG00000002717	pabpc1b	100	89.342	Oreochromis_niloticus
ENSSPAG00000014453	-	58	80.102	ENSOCUG00000002565	-	98	80.102	Oryctolagus_cuniculus
ENSSPAG00000014453	-	99	99.048	ENSORLG00000002691	pabpc1a	100	99.048	Oryzias_latipes
ENSSPAG00000014453	-	100	84.615	ENSORLG00000003008	-	100	84.301	Oryzias_latipes
ENSSPAG00000014453	-	100	97.638	ENSORLG00020022398	pabpc1a	100	97.638	Oryzias_latipes_hni
ENSSPAG00000014453	-	100	84.458	ENSORLG00020022259	-	100	84.144	Oryzias_latipes_hni
ENSSPAG00000014453	-	100	97.480	ENSORLG00015013633	pabpc1	100	97.480	Oryzias_latipes_hsok
ENSSPAG00000014453	-	100	84.929	ENSORLG00015010932	-	100	84.615	Oryzias_latipes_hsok
ENSSPAG00000014453	-	100	98.268	ENSOMEG00000020219	pabpc1a	100	98.268	Oryzias_melastigma
ENSSPAG00000014453	-	99	81.236	ENSOMEG00000013627	pabpc1b	100	81.236	Oryzias_melastigma
ENSSPAG00000014453	-	58	80.102	ENSOGAG00000029513	-	98	80.102	Otolemur_garnettii
ENSSPAG00000014453	-	58	80.102	ENSOGAG00000026047	-	98	80.102	Otolemur_garnettii
ENSSPAG00000014453	-	58	80.102	ENSOARG00000005943	-	98	80.102	Ovis_aries
ENSSPAG00000014453	-	58	80.102	ENSPPAG00000012920	-	98	80.102	Pan_paniscus
ENSSPAG00000014453	-	58	80.102	ENSPPRG00000011809	-	98	80.102	Panthera_pardus
ENSSPAG00000014453	-	58	80.102	ENSPPRG00000011804	-	98	80.102	Panthera_pardus
ENSSPAG00000014453	-	58	80.102	ENSPTRG00000028252	-	98	80.102	Pan_troglodytes
ENSSPAG00000014453	-	58	80.102	ENSPANG00000011549	-	98	80.102	Papio_anubis
ENSSPAG00000014453	-	100	90.282	ENSPKIG00000005676	pabpc1b	100	90.282	Paramormyrops_kingsleyae
ENSSPAG00000014453	-	70	92.152	ENSPMGG00000023134	-	97	92.152	Periophthalmus_magnuspinnatus
ENSSPAG00000014453	-	70	98.427	ENSPMGG00000022487	pabpc1a	92	98.427	Periophthalmus_magnuspinnatus
ENSSPAG00000014453	-	99	71.949	ENSPCIG00000016995	-	55	71.930	Phascolarctos_cinereus
ENSSPAG00000014453	-	100	89.812	ENSPFOG00000005917	pabpc1b	100	89.969	Poecilia_formosa
ENSSPAG00000014453	-	100	96.754	ENSPFOG00000010815	pabpc1a	100	96.754	Poecilia_formosa
ENSSPAG00000014453	-	100	98.740	ENSPLAG00000004114	pabpc1a	100	98.740	Poecilia_latipinna
ENSSPAG00000014453	-	100	90.125	ENSPLAG00000001388	pabpc1b	100	90.282	Poecilia_latipinna
ENSSPAG00000014453	-	100	98.740	ENSPMEG00000001334	pabpc1a	100	98.740	Poecilia_mexicana
ENSSPAG00000014453	-	100	89.812	ENSPMEG00000014399	pabpc1b	100	89.969	Poecilia_mexicana
ENSSPAG00000014453	-	100	95.476	ENSPREG00000019595	pabpc1a	100	95.872	Poecilia_reticulata
ENSSPAG00000014453	-	100	90.125	ENSPREG00000010911	pabpc1b	100	90.282	Poecilia_reticulata
ENSSPAG00000014453	-	58	80.102	ENSPPYG00000020468	-	98	80.102	Pongo_abelii
ENSSPAG00000014453	-	59	80.102	ENSPCAG00000005308	-	98	80.102	Procavia_capensis
ENSSPAG00000014453	-	58	79.592	ENSPCOG00000026349	-	98	79.592	Propithecus_coquereli
ENSSPAG00000014453	-	59	80.513	ENSPVAG00000016117	-	98	80.513	Pteropus_vampyrus
ENSSPAG00000014453	-	100	98.268	ENSPNYG00000005192	pabpc1a	100	98.268	Pundamilia_nyererei
ENSSPAG00000014453	-	100	89.342	ENSPNYG00000012578	pabpc1b	100	89.185	Pundamilia_nyererei
ENSSPAG00000014453	-	100	91.209	ENSPNAG00000028408	pabpc1a	100	90.895	Pygocentrus_nattereri
ENSSPAG00000014453	-	100	89.969	ENSPNAG00000024626	pabpc1b	100	89.812	Pygocentrus_nattereri
ENSSPAG00000014453	-	99	89.437	ENSRBIG00000028738	-	95	89.437	Rhinopithecus_bieti
ENSSPAG00000014453	-	58	80.102	ENSRBIG00000027173	-	98	80.102	Rhinopithecus_bieti
ENSSPAG00000014453	-	58	80.102	ENSRROG00000017404	-	98	80.102	Rhinopithecus_roxellana
ENSSPAG00000014453	-	98	63.942	ENSSHAG00000000511	-	100	63.622	Sarcophilus_harrisii
ENSSPAG00000014453	-	100	90.267	ENSSFOG00015002752	-	100	90.110	Scleropages_formosus
ENSSPAG00000014453	-	69	78.613	ENSSFOG00015019668	-	88	78.613	Scleropages_formosus
ENSSPAG00000014453	-	100	90.267	ENSSFOG00015006662	pabpc1a	100	90.267	Scleropages_formosus
ENSSPAG00000014453	-	100	98.268	ENSSMAG00000010803	pabpc1a	100	98.268	Scophthalmus_maximus
ENSSPAG00000014453	-	100	88.871	ENSSMAG00000006869	pabpc1b	100	88.715	Scophthalmus_maximus
ENSSPAG00000014453	-	100	98.425	ENSSDUG00000006675	pabpc1a	100	98.425	Seriola_dumerili
ENSSPAG00000014453	-	100	88.715	ENSSDUG00000011965	pabpc1b	100	88.383	Seriola_dumerili
ENSSPAG00000014453	-	100	90.358	ENSSLDG00000014156	pabpc1b	100	90.031	Seriola_lalandi_dorsalis
ENSSPAG00000014453	-	100	98.425	ENSSLDG00000011661	pabpc1a	100	98.425	Seriola_lalandi_dorsalis
ENSSPAG00000014453	-	58	80.102	ENSSSCG00000036336	-	98	80.102	Sus_scrofa
ENSSPAG00000014453	-	58	80.102	ENSSSCG00000032167	-	98	80.102	Sus_scrofa
ENSSPAG00000014453	-	100	94.969	ENSTRUG00000011577	-	100	95.440	Takifugu_rubripes
ENSSPAG00000014453	-	100	86.228	ENSTRUG00000003767	-	100	86.228	Takifugu_rubripes
ENSSPAG00000014453	-	100	92.093	ENSTNIG00000013307	pabpc1a	100	92.558	Tetraodon_nigroviridis
ENSSPAG00000014453	-	100	86.760	ENSTNIG00000009153	pabpc1b	100	86.137	Tetraodon_nigroviridis
ENSSPAG00000014453	-	58	80.102	ENSTTRG00000013181	-	98	80.102	Tursiops_truncatus
ENSSPAG00000014453	-	58	80.102	ENSUAMG00000008089	-	98	80.102	Ursus_americanus
ENSSPAG00000014453	-	58	80.102	ENSUMAG00000003364	-	98	80.102	Ursus_maritimus
ENSSPAG00000014453	-	97	54.369	ENSUMAG00000023926	-	89	69.890	Ursus_maritimus
ENSSPAG00000014453	-	58	79.000	ENSVVUG00000015892	-	97	79.000	Vulpes_vulpes
ENSSPAG00000014453	-	97	45.221	ENSXETG00000015439	-	97	45.392	Xenopus_tropicalis
ENSSPAG00000014453	-	100	85.893	ENSXCOG00000019901	pabpc1b	100	85.893	Xiphophorus_couchianus
ENSSPAG00000014453	-	100	92.283	ENSXCOG00000017066	pabpc1a	100	92.283	Xiphophorus_couchianus
ENSSPAG00000014453	-	100	98.268	ENSXMAG00000002555	pabpc1a	100	98.268	Xiphophorus_maculatus
ENSSPAG00000014453	-	100	90.282	ENSXMAG00000003753	pabpc1b	100	90.439	Xiphophorus_maculatus