EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000014538 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 5672 bases
Position: chrKK580488.1:277777-283448
Accession: 103360130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000019510	RRM_1	PF00076.22	2.6e-31	1	2
ENSSPAP00000019510	RRM_1	PF00076.22	2.6e-31	2	2
ENSSPAP00000019443	RRM_1	PF00076.22	6.2e-31	1	2
ENSSPAP00000019443	RRM_1	PF00076.22	6.2e-31	2	2
ENSSPAP00000019462	RRM_1	PF00076.22	6e-22	1	1
ENSSPAP00000019380	RRM_1	PF00076.22	5.5e-19	1	1
ENSSPAP00000019583	RRM_1	PF00076.22	5e-17	1	1
ENSSPAP00000019578	RRM_1	PF00076.22	6.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000019804	-	813	-	ENSSPAP00000019510	270 (aa)	-	-
ENSSPAT00000019737	-	1116	XM_008285795	ENSSPAP00000019443	371 (aa)	XP_008284017	-
ENSSPAT00000019875	-	369	-	ENSSPAP00000019578	122 (aa)	-	-
ENSSPAT00000019757	-	885	-	ENSSPAP00000019462	294 (aa)	-	-
ENSSPAT00000019879	-	333	-	ENSSPAP00000019583	110 (aa)	-	-
ENSSPAT00000019676	-	429	-	ENSSPAP00000019380	142 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000014538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000014538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000014538	srsf4	67	42.857	ENSSPAG00000017902	-	88	30.597
ENSSPAG00000014538	srsf4	82	40.157	ENSSPAG00000006285	srsf9	74	43.850
ENSSPAG00000014538	srsf4	83	71.212	ENSSPAG00000002362	srsf6a	82	66.524
ENSSPAG00000014538	srsf4	92	60.432	ENSSPAG00000002821	srsf5a	94	50.365
ENSSPAG00000014538	srsf4	56	38.095	ENSSPAG00000014679	-	66	38.095
ENSSPAG00000014538	srsf4	67	46.154	ENSSPAG00000017204	srsf7b	65	42.391
ENSSPAG00000014538	srsf4	82	62.205	ENSSPAG00000015325	srsf5b	95	52.878
ENSSPAG00000014538	srsf4	62	34.211	ENSSPAG00000023037	cirbpa	58	37.234
ENSSPAG00000014538	srsf4	92	39.623	ENSSPAG00000014152	-	91	38.075
ENSSPAG00000014538	srsf4	92	42.177	ENSSPAG00000022562	-	85	40.254
ENSSPAG00000014538	srsf4	67	44.156	ENSSPAG00000007497	srsf3b	63	39.423
ENSSPAG00000014538	srsf4	76	75.294	ENSSPAG00000021913	-	95	72.043
ENSSPAG00000014538	srsf4	69	45.570	ENSSPAG00000022192	srsf7a	63	45.570

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000014538	srsf4	83	85.950	ENSG00000116350	SRSF4	60	81.481	Homo_sapiens
ENSSPAG00000014538	srsf4	83	95.588	ENSAPOG00000020244	srsf4	92	88.921	Acanthochromis_polyacanthus
ENSSPAG00000014538	srsf4	83	73.984	ENSAPOG00000023399	-	60	76.536	Acanthochromis_polyacanthus
ENSSPAG00000014538	srsf4	83	93.277	ENSACIG00000018649	srsf4	91	95.588	Amphilophus_citrinellus
ENSSPAG00000014538	srsf4	83	97.479	ENSAOCG00000005997	srsf4	92	95.652	Amphiprion_ocellaris
ENSSPAG00000014538	srsf4	64	87.603	ENSAPEG00000020826	srsf4	84	82.510	Amphiprion_percula
ENSSPAG00000014538	srsf4	74	98.765	ENSAPEG00000020870	-	72	92.473	Amphiprion_percula
ENSSPAG00000014538	srsf4	81	90.244	ENSATEG00000005680	srsf4	74	93.923	Anabas_testudineus
ENSSPAG00000014538	srsf4	83	85.950	ENSANAG00000037134	SRSF4	53	77.632	Aotus_nancymaae
ENSSPAG00000014538	srsf4	79	95.588	ENSACLG00000003395	srsf4	90	95.588	Astatotilapia_calliptera
ENSSPAG00000014538	srsf4	83	73.016	ENSACLG00000021269	-	51	75.401	Astatotilapia_calliptera
ENSSPAG00000014538	srsf4	83	89.167	ENSAMXG00000034811	srsf4	76	92.308	Astyanax_mexicanus
ENSSPAG00000014538	srsf4	83	85.950	ENSBTAG00000013309	SRSF4	52	85.507	Bos_taurus
ENSSPAG00000014538	srsf4	82	53.472	WBGene00004698	rsp-1	99	52.055	Caenorhabditis_elegans
ENSSPAG00000014538	srsf4	83	85.950	ENSCHIG00000022096	SRSF4	51	85.507	Capra_hircus
ENSSPAG00000014538	srsf4	58	82.353	ENSCHOG00000013858	SRSF4	50	64.435	Choloepus_hoffmanni
ENSSPAG00000014538	srsf4	70	73.077	ENSCING00000012370	-	82	55.422	Ciona_intestinalis
ENSSPAG00000014538	srsf4	68	65.333	ENSCING00000024718	-	56	58.247	Ciona_intestinalis
ENSSPAG00000014538	srsf4	70	71.429	ENSCING00000011362	-	65	58.602	Ciona_intestinalis
ENSSPAG00000014538	srsf4	73	69.136	ENSCING00000020631	-	90	54.661	Ciona_intestinalis
ENSSPAG00000014538	srsf4	82	65.556	ENSCSAVG00000002581	-	66	66.484	Ciona_savignyi
ENSSPAG00000014538	srsf4	84	90.164	ENSCSEG00000010058	srsf4	85	95.588	Cynoglossus_semilaevis
ENSSPAG00000014538	srsf4	85	62.934	ENSCVAG00000004342	srsf4	81	66.279	Cyprinodon_variegatus
ENSSPAG00000014538	srsf4	83	82.258	ENSDARG00000105293	srsf4	90	82.105	Danio_rerio
ENSSPAG00000014538	srsf4	92	54.545	FBgn0004587	B52	95	60.938	Drosophila_melanogaster
ENSSPAG00000014538	srsf4	83	64.167	ENSEBUG00000005588	srsf4	67	51.908	Eptatretus_burgeri
ENSSPAG00000014538	srsf4	58	66.667	ENSEBUG00000003129	srsf4	69	61.290	Eptatretus_burgeri
ENSSPAG00000014538	srsf4	92	55.474	ENSEBUG00000001681	srsf4	67	60.894	Eptatretus_burgeri
ENSSPAG00000014538	srsf4	83	85.950	ENSEASG00005010168	SRSF4	52	71.863	Equus_asinus_asinus
ENSSPAG00000014538	srsf4	83	85.950	ENSECAG00000021350	SRSF4	52	71.863	Equus_caballus
ENSSPAG00000014538	srsf4	83	85.950	ENSEEUG00000008479	SRSF4	51	68.826	Erinaceus_europaeus
ENSSPAG00000014538	srsf4	100	62.752	ENSELUG00000017551	srsf4	95	75.000	Esox_lucius
ENSSPAG00000014538	srsf4	83	94.167	ENSFHEG00000007472	srsf4	87	100.000	Fundulus_heteroclitus
ENSSPAG00000014538	srsf4	83	90.083	ENSGMOG00000012906	srsf4	70	82.379	Gadus_morhua
ENSSPAG00000014538	srsf4	90	95.588	ENSGAFG00000018496	srsf4	94	95.588	Gambusia_affinis
ENSSPAG00000014538	srsf4	83	93.388	ENSGACG00000002389	srsf4	85	81.022	Gasterosteus_aculeatus
ENSSPAG00000014538	srsf4	83	73.016	ENSHBUG00000011326	-	81	76.812	Haplochromis_burtoni
ENSSPAG00000014538	srsf4	94	78.641	ENSHBUG00000016897	-	99	77.982	Haplochromis_burtoni
ENSSPAG00000014538	srsf4	83	94.118	ENSHCOG00000012540	srsf4	84	98.485	Hippocampus_comes
ENSSPAG00000014538	srsf4	90	95.588	ENSKMAG00000013631	srsf4	91	75.090	Kryptolebias_marmoratus
ENSSPAG00000014538	srsf4	67	100.000	ENSLBEG00000017163	-	75	98.765	Labrus_bergylta
ENSSPAG00000014538	srsf4	83	70.866	ENSLOCG00000001442	-	61	71.121	Lepisosteus_oculatus
ENSSPAG00000014538	srsf4	83	85.950	ENSLAFG00000002575	SRSF4	51	77.632	Loxodonta_africana
ENSSPAG00000014538	srsf4	83	85.950	ENSMMUG00000007110	SRSF4	56	77.632	Macaca_mulatta
ENSSPAG00000014538	srsf4	83	97.458	ENSMAMG00000004888	srsf4	84	95.588	Mastacembelus_armatus
ENSSPAG00000014538	srsf4	79	95.588	ENSMZEG00005026275	srsf4	92	85.591	Maylandia_zebra
ENSSPAG00000014538	srsf4	74	97.531	ENSMZEG00005025078	-	99	77.273	Maylandia_zebra
ENSSPAG00000014538	srsf4	83	85.124	ENSMGAG00000002400	SRSF4	73	61.207	Meleagris_gallopavo
ENSSPAG00000014538	srsf4	79	95.588	ENSMMOG00000013653	srsf4	84	95.588	Mola_mola
ENSSPAG00000014538	srsf4	83	85.950	ENSMODG00000011052	SRSF4	62	85.507	Monodelphis_domestica
ENSSPAG00000014538	srsf4	81	71.910	ENSMALG00000010062	-	89	75.000	Monopterus_albus
ENSSPAG00000014538	srsf4	93	94.118	ENSMALG00000013392	srsf4	84	95.588	Monopterus_albus
ENSSPAG00000014538	srsf4	88	85.507	MGP_CAROLIEiJ_G0026555	Srsf4	53	71.970	Mus_caroli
ENSSPAG00000014538	srsf4	88	85.507	ENSMUSG00000028911	Srsf4	54	71.970	Mus_musculus
ENSSPAG00000014538	srsf4	83	85.950	MGP_PahariEiJ_G0028887	Srsf4	54	66.909	Mus_pahari
ENSSPAG00000014538	srsf4	88	85.507	MGP_SPRETEiJ_G0027535	Srsf4	53	71.970	Mus_spretus
ENSSPAG00000014538	srsf4	74	97.531	ENSNBRG00000014840	-	99	80.189	Neolamprologus_brichardi
ENSSPAG00000014538	srsf4	83	68.908	ENSNLEG00000030787	-	76	61.472	Nomascus_leucogenys
ENSSPAG00000014538	srsf4	83	85.124	ENSOPRG00000010098	SRSF4	54	71.483	Ochotona_princeps
ENSSPAG00000014538	srsf4	74	97.531	ENSONIG00000013730	srsf4	84	94.203	Oreochromis_niloticus
ENSSPAG00000014538	srsf4	67	100.000	ENSORLG00000028783	-	74	98.765	Oryzias_latipes
ENSSPAG00000014538	srsf4	83	95.041	ENSORLG00020016052	srsf4	66	95.531	Oryzias_latipes_hni
ENSSPAG00000014538	srsf4	90	95.588	ENSORLG00015007566	srsf4	87	95.588	Oryzias_latipes_hsok
ENSSPAG00000014538	srsf4	90	95.588	ENSOMEG00000005541	srsf4	89	74.699	Oryzias_melastigma
ENSSPAG00000014538	srsf4	58	83.529	ENSOARG00000002451	SRSF4	60	75.000	Ovis_aries
ENSSPAG00000014538	srsf4	73	80.247	ENSOARG00000017944	-	94	31.488	Ovis_aries
ENSSPAG00000014538	srsf4	87	84.091	ENSPMGG00000013436	srsf4	97	94.118	Periophthalmus_magnuspinnatus
ENSSPAG00000014538	srsf4	83	63.780	ENSPMAG00000009397	srsf4	86	60.684	Petromyzon_marinus
ENSSPAG00000014538	srsf4	83	95.833	ENSPFOG00000001306	srsf4	92	73.731	Poecilia_formosa
ENSSPAG00000014538	srsf4	83	95.833	ENSPLAG00000008812	srsf4	89	95.652	Poecilia_latipinna
ENSSPAG00000014538	srsf4	81	95.588	ENSPMEG00000023638	srsf4	88	95.652	Poecilia_mexicana
ENSSPAG00000014538	srsf4	83	95.833	ENSPREG00000009639	srsf4	95	95.652	Poecilia_reticulata
ENSSPAG00000014538	srsf4	74	97.531	ENSPNYG00000003796	srsf4	68	94.203	Pundamilia_nyererei
ENSSPAG00000014538	srsf4	83	92.373	ENSPNAG00000023844	srsf4	62	89.855	Pygocentrus_nattereri
ENSSPAG00000014538	srsf4	83	85.950	ENSRNOG00000010007	Srsf4	54	70.342	Rattus_norvegicus
ENSSPAG00000014538	srsf4	61	81.111	ENSSHAG00000012407	SRSF4	65	74.619	Sarcophilus_harrisii
ENSSPAG00000014538	srsf4	100	76.056	ENSSFOG00015020292	srsf4	89	84.211	Scleropages_formosus
ENSSPAG00000014538	srsf4	83	91.270	ENSSMAG00000001707	srsf4	82	94.203	Scophthalmus_maximus
ENSSPAG00000014538	srsf4	83	97.458	ENSSDUG00000007387	srsf4	86	77.744	Seriola_dumerili
ENSSPAG00000014538	srsf4	83	71.186	ENSSLDG00000009745	srsf4	79	84.091	Seriola_lalandi_dorsalis
ENSSPAG00000014538	srsf4	76	81.395	ENSSPUG00000019124	-	100	78.652	Sphenodon_punctatus
ENSSPAG00000014538	srsf4	83	85.950	ENSSSCG00000003589	SRSF4	53	73.518	Sus_scrofa
ENSSPAG00000014538	srsf4	90	94.118	ENSTRUG00000011891	srsf4	95	78.231	Takifugu_rubripes
ENSSPAG00000014538	srsf4	83	95.833	ENSTNIG00000000115	-	83	75.309	Tetraodon_nigroviridis
ENSSPAG00000014538	srsf4	83	96.639	ENSTNIG00000005573	srsf4	90	74.269	Tetraodon_nigroviridis
ENSSPAG00000014538	srsf4	100	62.724	ENSXETG00000014380	srsf4	51	63.137	Xenopus_tropicalis
ENSSPAG00000014538	srsf4	83	68.939	ENSXCOG00000003212	-	68	68.511	Xiphophorus_couchianus
ENSSPAG00000014538	srsf4	83	92.437	ENSXCOG00000018826	srsf4	98	81.955	Xiphophorus_couchianus
ENSSPAG00000014538	srsf4	77	96.471	ENSXMAG00000021549	-	71	96.429	Xiphophorus_maculatus