EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000015573 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110796
Alias: cb676|msi1
Full Name: zgc:110796
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 12914 bases
Position: chrKK581327.1:188254-201167
Accession: ZDB-GENE-050306-36
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000020652	RRM_1	PF00076.22	5.2e-21	1	2
ENSSPAP00000020652	RRM_1	PF00076.22	5.2e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000020968	-	588	-	ENSSPAP00000020652	195 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000015573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000015573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000015573	zgc:110796	82	71.341	ENSSPAG00000017793	msi2a	62	70.186
ENSSPAG00000015573	zgc:110796	62	32.773	ENSSPAG00000021157	-	64	32.773
ENSSPAG00000015573	zgc:110796	62	32.773	ENSSPAG00000001196	-	64	32.773
ENSSPAG00000015573	zgc:110796	74	46.218	ENSSPAG00000013787	hnrnpaba	50	46.957
ENSSPAG00000015573	zgc:110796	63	36.290	ENSSPAG00000008969	hnrnpa3	51	35.714
ENSSPAG00000015573	zgc:110796	82	36.970	ENSSPAG00000005377	-	74	36.970
ENSSPAG00000015573	zgc:110796	60	53.659	ENSSPAG00000002402	dazap1	55	36.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000015573	zgc:110796	82	74.375	ENSG00000135097	MSI1	52	95.062	Homo_sapiens
ENSSPAG00000015573	zgc:110796	82	82.099	ENSAPOG00000003191	MSI1	59	82.099	Acanthochromis_polyacanthus
ENSSPAG00000015573	zgc:110796	82	86.250	ENSAPOG00000023458	-	54	86.250	Acanthochromis_polyacanthus
ENSSPAG00000015573	zgc:110796	60	94.872	ENSACIG00000017754	-	64	93.277	Amphilophus_citrinellus
ENSSPAG00000015573	zgc:110796	51	73.000	ENSACIG00000018210	zgc:110796	98	73.000	Amphilophus_citrinellus
ENSSPAG00000015573	zgc:110796	82	80.247	ENSAOCG00000003804	MSI1	55	80.247	Amphiprion_ocellaris
ENSSPAG00000015573	zgc:110796	82	80.247	ENSAPEG00000003245	MSI1	55	80.247	Amphiprion_percula
ENSSPAG00000015573	zgc:110796	82	82.716	ENSATEG00000023779	-	54	82.716	Anabas_testudineus
ENSSPAG00000015573	zgc:110796	82	84.431	ENSATEG00000017059	MSI1	58	84.431	Anabas_testudineus
ENSSPAG00000015573	zgc:110796	82	73.913	ENSACAG00000002762	MSI1	53	73.913	Anolis_carolinensis
ENSSPAG00000015573	zgc:110796	82	74.375	ENSANAG00000027151	MSI1	52	74.375	Aotus_nancymaae
ENSSPAG00000015573	zgc:110796	82	72.500	ENSANAG00000027901	-	58	72.500	Aotus_nancymaae
ENSSPAG00000015573	zgc:110796	82	80.247	ENSACLG00000011230	MSI1	97	60.465	Astatotilapia_calliptera
ENSSPAG00000015573	zgc:110796	82	85.000	ENSACLG00000000117	-	54	85.000	Astatotilapia_calliptera
ENSSPAG00000015573	zgc:110796	82	74.375	ENSBTAG00000009800	MSI1	54	74.375	Bos_taurus
ENSSPAG00000015573	zgc:110796	82	74.375	ENSCJAG00000008578	MSI1	52	74.375	Callithrix_jacchus
ENSSPAG00000015573	zgc:110796	82	73.750	ENSCAFG00000010283	MSI1	52	73.750	Canis_familiaris
ENSSPAG00000015573	zgc:110796	82	74.375	ENSCHIG00000024304	MSI1	52	74.375	Capra_hircus
ENSSPAG00000015573	zgc:110796	82	74.375	ENSCCAG00000035567	MSI1	52	74.375	Cebus_capucinus
ENSSPAG00000015573	zgc:110796	82	74.375	ENSCATG00000030019	MSI1	54	74.375	Cercocebus_atys
ENSSPAG00000015573	zgc:110796	82	74.375	ENSCSAG00000002265	MSI1	65	74.375	Chlorocebus_sabaeus
ENSSPAG00000015573	zgc:110796	82	75.625	ENSCPBG00000011349	MSI1	50	90.598	Chrysemys_picta_bellii
ENSSPAG00000015573	zgc:110796	82	74.375	ENSCGRG00001018883	Msi1	52	74.375	Cricetulus_griseus_chok1gshd
ENSSPAG00000015573	zgc:110796	82	80.247	ENSCSEG00000005834	-	55	80.247	Cynoglossus_semilaevis
ENSSPAG00000015573	zgc:110796	82	84.375	ENSCSEG00000008352	-	57	84.375	Cynoglossus_semilaevis
ENSSPAG00000015573	zgc:110796	82	54.167	ENSCVAG00000017430	zgc:110796	94	54.167	Cyprinodon_variegatus
ENSSPAG00000015573	zgc:110796	82	85.625	ENSCVAG00000009100	MSI1	57	85.625	Cyprinodon_variegatus
ENSSPAG00000015573	zgc:110796	60	100.000	ENSDARG00000010710	msi1	52	97.414	Danio_rerio
ENSSPAG00000015573	zgc:110796	72	68.627	ENSDARG00000041299	zgc:110796	98	70.588	Danio_rerio
ENSSPAG00000015573	zgc:110796	82	74.375	ENSEASG00005004736	MSI1	55	74.375	Equus_asinus_asinus
ENSSPAG00000015573	zgc:110796	82	74.375	ENSECAG00000017526	MSI1	52	74.375	Equus_caballus
ENSSPAG00000015573	zgc:110796	82	83.750	ENSELUG00000023219	MSI1	50	83.750	Esox_lucius
ENSSPAG00000015573	zgc:110796	82	74.375	ENSFCAG00000011007	MSI1	52	74.375	Felis_catus
ENSSPAG00000015573	zgc:110796	82	85.625	ENSFHEG00000022446	MSI1	54	85.625	Fundulus_heteroclitus
ENSSPAG00000015573	zgc:110796	82	80.247	ENSFHEG00000003560	-	56	79.375	Fundulus_heteroclitus
ENSSPAG00000015573	zgc:110796	82	65.839	ENSGMOG00000017838	-	54	65.839	Gadus_morhua
ENSSPAG00000015573	zgc:110796	82	83.125	ENSGMOG00000001006	MSI1	54	83.125	Gadus_morhua
ENSSPAG00000015573	zgc:110796	82	75.625	ENSGALG00000007227	MSI1	50	75.625	Gallus_gallus
ENSSPAG00000015573	zgc:110796	82	85.000	ENSGACG00000012679	MSI1	59	85.000	Gasterosteus_aculeatus
ENSSPAG00000015573	zgc:110796	86	71.875	ENSGACG00000008674	-	52	71.875	Gasterosteus_aculeatus
ENSSPAG00000015573	zgc:110796	82	75.625	ENSGAGG00000016037	MSI1	57	75.625	Gopherus_agassizii
ENSSPAG00000015573	zgc:110796	82	80.247	ENSHBUG00000021921	MSI1	54	80.247	Haplochromis_burtoni
ENSSPAG00000015573	zgc:110796	82	85.000	ENSHBUG00000011841	-	54	85.000	Haplochromis_burtoni
ENSSPAG00000015573	zgc:110796	82	74.375	ENSHGLG00000012782	MSI1	52	74.375	Heterocephalus_glaber_female
ENSSPAG00000015573	zgc:110796	60	94.017	ENSHCOG00000012019	MSI1	51	94.017	Hippocampus_comes
ENSSPAG00000015573	zgc:110796	82	86.875	ENSHCOG00000012067	-	81	96.000	Hippocampus_comes
ENSSPAG00000015573	zgc:110796	82	78.750	ENSIPUG00000001976	msi1	51	95.726	Ictalurus_punctatus
ENSSPAG00000015573	zgc:110796	82	74.375	ENSJJAG00000010463	Msi1	53	74.375	Jaculus_jaculus
ENSSPAG00000015573	zgc:110796	82	71.875	ENSJJAG00000010643	-	57	71.875	Jaculus_jaculus
ENSSPAG00000015573	zgc:110796	60	94.017	ENSKMAG00000019877	-	51	94.017	Kryptolebias_marmoratus
ENSSPAG00000015573	zgc:110796	82	85.625	ENSKMAG00000011251	MSI1	54	85.625	Kryptolebias_marmoratus
ENSSPAG00000015573	zgc:110796	82	79.630	ENSLBEG00000001375	-	55	79.630	Labrus_bergylta
ENSSPAG00000015573	zgc:110796	82	85.625	ENSLBEG00000008789	MSI1	57	85.625	Labrus_bergylta
ENSSPAG00000015573	zgc:110796	82	63.333	ENSLOCG00000008618	zgc:110796	71	63.333	Lepisosteus_oculatus
ENSSPAG00000015573	zgc:110796	60	71.901	ENSLAFG00000009412	MSI1	53	71.901	Loxodonta_africana
ENSSPAG00000015573	zgc:110796	82	74.375	ENSMNEG00000040034	MSI1	55	74.375	Macaca_nemestrina
ENSSPAG00000015573	zgc:110796	82	84.375	ENSMAMG00000002279	MSI1	54	84.375	Mastacembelus_armatus
ENSSPAG00000015573	zgc:110796	82	79.630	ENSMAMG00000018426	-	52	94.017	Mastacembelus_armatus
ENSSPAG00000015573	zgc:110796	82	80.247	ENSMZEG00005026892	MSI1	54	80.247	Maylandia_zebra
ENSSPAG00000015573	zgc:110796	82	85.000	ENSMZEG00005000340	-	57	85.000	Maylandia_zebra
ENSSPAG00000015573	zgc:110796	60	94.937	ENSMGAG00000016518	-	70	94.937	Meleagris_gallopavo
ENSSPAG00000015573	zgc:110796	61	89.076	ENSMAUG00000016820	Msi1	70	89.076	Mesocricetus_auratus
ENSSPAG00000015573	zgc:110796	82	74.375	ENSMICG00000033181	MSI1	54	74.375	Microcebus_murinus
ENSSPAG00000015573	zgc:110796	82	73.750	ENSMOCG00000002286	Msi1	52	73.750	Microtus_ochrogaster
ENSSPAG00000015573	zgc:110796	60	99.145	ENSMMOG00000010492	MSI1	50	99.145	Mola_mola
ENSSPAG00000015573	zgc:110796	82	75.000	ENSMMOG00000012265	-	55	75.000	Mola_mola
ENSSPAG00000015573	zgc:110796	82	85.625	ENSMALG00000017889	MSI1	54	85.625	Monopterus_albus
ENSSPAG00000015573	zgc:110796	60	94.872	ENSMALG00000001426	-	51	94.872	Monopterus_albus
ENSSPAG00000015573	zgc:110796	82	73.750	MGP_CAROLIEiJ_G0027626	Msi1	58	89.744	Mus_caroli
ENSSPAG00000015573	zgc:110796	82	73.750	ENSMUSG00000054256	Msi1	58	89.744	Mus_musculus
ENSSPAG00000015573	zgc:110796	82	73.750	MGP_PahariEiJ_G0024206	Msi1	58	89.744	Mus_pahari
ENSSPAG00000015573	zgc:110796	82	73.750	MGP_SPRETEiJ_G0028624	Msi1	58	89.744	Mus_spretus
ENSSPAG00000015573	zgc:110796	72	67.647	ENSNBRG00000018002	zgc:110796	98	67.647	Neolamprologus_brichardi
ENSSPAG00000015573	zgc:110796	82	85.000	ENSNBRG00000000841	-	57	85.000	Neolamprologus_brichardi
ENSSPAG00000015573	zgc:110796	82	85.000	ENSONIG00000011182	MSI1	54	85.000	Oreochromis_niloticus
ENSSPAG00000015573	zgc:110796	82	80.247	ENSONIG00000019452	-	52	80.247	Oreochromis_niloticus
ENSSPAG00000015573	zgc:110796	82	79.012	ENSORLG00000029593	MSI1	50	93.162	Oryzias_latipes
ENSSPAG00000015573	zgc:110796	82	84.375	ENSORLG00000019978	-	54	84.375	Oryzias_latipes
ENSSPAG00000015573	zgc:110796	82	79.012	ENSORLG00020008266	MSI1	50	93.162	Oryzias_latipes_hni
ENSSPAG00000015573	zgc:110796	82	79.012	ENSORLG00015003916	MSI1	50	93.162	Oryzias_latipes_hsok
ENSSPAG00000015573	zgc:110796	82	84.375	ENSOMEG00000017536	MSI1	54	84.375	Oryzias_melastigma
ENSSPAG00000015573	zgc:110796	82	79.630	ENSOMEG00000002272	-	51	94.017	Oryzias_melastigma
ENSSPAG00000015573	zgc:110796	82	74.375	ENSPPRG00000000370	MSI1	52	74.375	Panthera_pardus
ENSSPAG00000015573	zgc:110796	82	74.375	ENSPTRG00000005531	MSI1	54	74.375	Pan_troglodytes
ENSSPAG00000015573	zgc:110796	82	73.750	ENSPANG00000006335	MSI1	52	73.750	Papio_anubis
ENSSPAG00000015573	zgc:110796	82	81.875	ENSPKIG00000023575	-	54	81.875	Paramormyrops_kingsleyae
ENSSPAG00000015573	zgc:110796	82	83.750	ENSPKIG00000016497	MSI1	57	83.750	Paramormyrops_kingsleyae
ENSSPAG00000015573	zgc:110796	55	81.308	ENSPSIG00000016295	-	87	81.308	Pelodiscus_sinensis
ENSSPAG00000015573	zgc:110796	60	90.598	ENSPSIG00000011608	-	50	90.598	Pelodiscus_sinensis
ENSSPAG00000015573	zgc:110796	61	88.034	ENSPMGG00000007743	-	56	70.253	Periophthalmus_magnuspinnatus
ENSSPAG00000015573	zgc:110796	60	99.145	ENSPMGG00000000514	MSI1	51	99.145	Periophthalmus_magnuspinnatus
ENSSPAG00000015573	zgc:110796	82	85.625	ENSPFOG00000013113	MSI1	54	85.625	Poecilia_formosa
ENSSPAG00000015573	zgc:110796	82	80.247	ENSPLAG00000012431	-	53	80.247	Poecilia_latipinna
ENSSPAG00000015573	zgc:110796	82	85.625	ENSPLAG00000014025	-	50	99.145	Poecilia_latipinna
ENSSPAG00000015573	zgc:110796	82	85.625	ENSPMEG00000012796	MSI1	57	85.625	Poecilia_mexicana
ENSSPAG00000015573	zgc:110796	57	71.681	ENSPREG00000020265	zgc:110796	91	71.681	Poecilia_reticulata
ENSSPAG00000015573	zgc:110796	60	94.872	ENSPREG00000021416	-	55	78.571	Poecilia_reticulata
ENSSPAG00000015573	zgc:110796	82	74.375	ENSPPYG00000005027	MSI1	52	74.375	Pongo_abelii
ENSSPAG00000015573	zgc:110796	82	74.375	ENSPCOG00000017341	MSI1	55	74.375	Propithecus_coquereli
ENSSPAG00000015573	zgc:110796	82	85.000	ENSPNYG00000002529	-	54	85.000	Pundamilia_nyererei
ENSSPAG00000015573	zgc:110796	82	80.247	ENSPNYG00000004379	MSI1	54	80.247	Pundamilia_nyererei
ENSSPAG00000015573	zgc:110796	82	81.988	ENSPNAG00000019337	msi1	58	81.988	Pygocentrus_nattereri
ENSSPAG00000015573	zgc:110796	60	90.598	ENSSBOG00000030259	MSI1	50	90.598	Saimiri_boliviensis_boliviensis
ENSSPAG00000015573	zgc:110796	60	96.581	ENSSFOG00015005350	MSI1	50	96.581	Scleropages_formosus
ENSSPAG00000015573	zgc:110796	60	99.145	ENSSMAG00000018824	MSI1	51	99.145	Scophthalmus_maximus
ENSSPAG00000015573	zgc:110796	82	80.247	ENSSDUG00000022697	-	55	80.247	Seriola_dumerili
ENSSPAG00000015573	zgc:110796	82	85.625	ENSSDUG00000001027	MSI1	54	85.625	Seriola_dumerili
ENSSPAG00000015573	zgc:110796	82	85.625	ENSSLDG00000016832	MSI1	57	85.625	Seriola_lalandi_dorsalis
ENSSPAG00000015573	zgc:110796	82	76.250	ENSSLDG00000018706	-	52	76.250	Seriola_lalandi_dorsalis
ENSSPAG00000015573	zgc:110796	82	74.375	ENSSPUG00000015741	MSI1	54	74.375	Sphenodon_punctatus
ENSSPAG00000015573	zgc:110796	82	74.375	ENSSSCG00000029365	MSI1	55	74.375	Sus_scrofa
ENSSPAG00000015573	zgc:110796	60	90.598	ENSTGUG00000009534	MSI1	50	90.598	Taeniopygia_guttata
ENSSPAG00000015573	zgc:110796	76	72.897	ENSTRUG00000021586	-	99	72.897	Takifugu_rubripes
ENSSPAG00000015573	zgc:110796	82	83.436	ENSTNIG00000011469	MSI1	56	83.436	Tetraodon_nigroviridis
ENSSPAG00000015573	zgc:110796	60	93.939	ENSUAMG00000015514	MSI1	70	85.938	Ursus_americanus
ENSSPAG00000015573	zgc:110796	82	74.375	ENSXETG00000012216	msi1	56	74.375	Xenopus_tropicalis
ENSSPAG00000015573	zgc:110796	82	85.625	ENSXMAG00000027103	MSI1	58	79.503	Xiphophorus_maculatus
ENSSPAG00000015573	zgc:110796	82	80.247	ENSXMAG00000018237	-	55	80.247	Xiphophorus_maculatus