EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000015639 (Gene tree)
Gene ID: 103376048
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 15806 bases
Position: chrJMKM01039894.1:30529-46334
Accession: 103376048
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000020819	RRM_4	PF10598.9	4.2e-33	1	1
ENSSPAP00000020819	U5_2-snRNA_bdg	PF10597.9	6.9e-74	1	1
ENSSPAP00000020819	PRO8NT	PF08082.11	2.9e-87	1	1
ENSSPAP00000020819	U6-snRNA_bdg	PF10596.9	1.7e-89	1	1
ENSSPAP00000020819	PROCN	PF08083.11	4.7e-236	1	1
ENSSPAP00000020819	PRP8_domainIV	PF12134.8	4.1e-130	1	1
ENSSPAP00000020819	PROCT	PF08084.11	2.7e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000021135	-	6993	XM_008306397	ENSSPAP00000020819	2330 (aa)	XP_008304619	-

Gene Model

Click here to download ENSSPAG00000015639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000015639's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000015639	prpf8	100	97.221	ENSG00000174231	PRPF8	100	97.221	Homo_sapiens
ENSSPAG00000015639	prpf8	100	99.401	ENSAPOG00000010079	prpf8	100	99.401	Acanthochromis_polyacanthus
ENSSPAG00000015639	prpf8	100	97.221	ENSAMEG00000007940	PRPF8	100	97.221	Ailuropoda_melanoleuca
ENSSPAG00000015639	prpf8	100	97.113	ENSACIG00000018280	prpf8	100	97.113	Amphilophus_citrinellus
ENSSPAG00000015639	prpf8	100	99.358	ENSAOCG00000010725	prpf8	100	99.358	Amphiprion_ocellaris
ENSSPAG00000015639	prpf8	100	99.358	ENSAPEG00000014397	prpf8	100	99.358	Amphiprion_percula
ENSSPAG00000015639	prpf8	100	98.460	ENSATEG00000010062	prpf8	100	98.460	Anabas_testudineus
ENSSPAG00000015639	prpf8	96	97.598	ENSAPLG00000010357	PRPF8	100	97.598	Anas_platyrhynchos
ENSSPAG00000015639	prpf8	82	95.619	ENSACAG00000014784	PRPF8	99	95.619	Anolis_carolinensis
ENSSPAG00000015639	prpf8	100	97.221	ENSANAG00000032629	PRPF8	100	97.221	Aotus_nancymaae
ENSSPAG00000015639	prpf8	100	98.383	ENSACLG00000020858	prpf8	100	98.383	Astatotilapia_calliptera
ENSSPAG00000015639	prpf8	100	98.546	ENSAMXG00000020291	prpf8	100	98.546	Astyanax_mexicanus
ENSSPAG00000015639	prpf8	100	97.221	ENSBTAG00000011488	PRPF8	100	97.221	Bos_taurus
ENSSPAG00000015639	prpf8	99	86.231	WBGene00004187	prp-8	99	86.678	Caenorhabditis_elegans
ENSSPAG00000015639	prpf8	100	97.221	ENSCJAG00000001911	PRPF8	100	97.221	Callithrix_jacchus
ENSSPAG00000015639	prpf8	100	97.221	ENSCAFG00000019221	PRPF8	100	97.221	Canis_familiaris
ENSSPAG00000015639	prpf8	96	97.635	ENSCAFG00020009943	PRPF8	100	97.635	Canis_lupus_dingo
ENSSPAG00000015639	prpf8	100	97.221	ENSCHIG00000017499	PRPF8	100	97.221	Capra_hircus
ENSSPAG00000015639	prpf8	100	97.221	ENSTSYG00000014120	PRPF8	100	97.221	Carlito_syrichta
ENSSPAG00000015639	prpf8	96	95.412	ENSCAPG00000009459	PRPF8	99	95.412	Cavia_aperea
ENSSPAG00000015639	prpf8	100	97.221	ENSCPOG00000010379	PRPF8	100	97.221	Cavia_porcellus
ENSSPAG00000015639	prpf8	100	97.221	ENSCCAG00000031983	-	100	97.221	Cebus_capucinus
ENSSPAG00000015639	prpf8	100	97.221	ENSCATG00000038595	PRPF8	100	97.221	Cercocebus_atys
ENSSPAG00000015639	prpf8	100	97.221	ENSCLAG00000004388	PRPF8	100	97.221	Chinchilla_lanigera
ENSSPAG00000015639	prpf8	100	97.221	ENSCSAG00000013929	PRPF8	100	97.221	Chlorocebus_sabaeus
ENSSPAG00000015639	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSSPAG00000015639	prpf8	100	97.177	ENSCPBG00000020409	PRPF8	100	97.177	Chrysemys_picta_bellii
ENSSPAG00000015639	prpf8	98	92.323	ENSCSAVG00000007825	-	100	90.765	Ciona_savignyi
ENSSPAG00000015639	prpf8	100	97.221	ENSCANG00000043088	PRPF8	100	97.221	Colobus_angolensis_palliatus
ENSSPAG00000015639	prpf8	73	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSSPAG00000015639	prpf8	100	98.760	ENSCSEG00000007905	prpf8	100	98.760	Cynoglossus_semilaevis
ENSSPAG00000015639	prpf8	100	98.335	ENSDARG00000026180	prpf8	100	98.335	Danio_rerio
ENSSPAG00000015639	prpf8	93	97.289	ENSDNOG00000018471	PRPF8	99	97.289	Dasypus_novemcinctus
ENSSPAG00000015639	prpf8	84	95.541	ENSDORG00000006185	Prpf8	96	95.541	Dipodomys_ordii
ENSSPAG00000015639	prpf8	99	91.336	FBgn0033688	Prp8	97	91.404	Drosophila_melanogaster
ENSSPAG00000015639	prpf8	100	91.877	ENSETEG00000017592	PRPF8	100	91.877	Echinops_telfairi
ENSSPAG00000015639	prpf8	99	93.325	ENSEBUG00000006548	prpf8	99	93.325	Eptatretus_burgeri
ENSSPAG00000015639	prpf8	100	97.221	ENSEASG00005009514	PRPF8	100	97.221	Equus_asinus_asinus
ENSSPAG00000015639	prpf8	97	97.670	ENSECAG00000021318	PRPF8	100	97.670	Equus_caballus
ENSSPAG00000015639	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSSPAG00000015639	prpf8	98	97.247	ENSELUG00000007120	prpf8	99	97.247	Esox_lucius
ENSSPAG00000015639	prpf8	100	97.221	ENSFCAG00000006297	PRPF8	100	97.221	Felis_catus
ENSSPAG00000015639	prpf8	100	97.263	ENSFALG00000006628	PRPF8	100	97.263	Ficedula_albicollis
ENSSPAG00000015639	prpf8	100	97.221	ENSFDAG00000004711	PRPF8	100	97.221	Fukomys_damarensis
ENSSPAG00000015639	prpf8	100	98.207	ENSFHEG00000021084	prpf8	100	98.207	Fundulus_heteroclitus
ENSSPAG00000015639	prpf8	100	96.235	ENSGMOG00000002028	prpf8	99	96.235	Gadus_morhua
ENSSPAG00000015639	prpf8	100	97.263	ENSGALG00000002943	PRPF8	100	97.263	Gallus_gallus
ENSSPAG00000015639	prpf8	99	98.204	ENSGAFG00000010337	prpf8	99	98.204	Gambusia_affinis
ENSSPAG00000015639	prpf8	100	98.717	ENSGACG00000008504	prpf8	100	98.717	Gasterosteus_aculeatus
ENSSPAG00000015639	prpf8	100	97.220	ENSGAGG00000008350	PRPF8	100	97.220	Gopherus_agassizii
ENSSPAG00000015639	prpf8	100	97.221	ENSGGOG00000005516	PRPF8	100	97.221	Gorilla_gorilla
ENSSPAG00000015639	prpf8	100	98.546	ENSHBUG00000016192	prpf8	100	98.546	Haplochromis_burtoni
ENSSPAG00000015639	prpf8	100	97.221	ENSHGLG00000012029	PRPF8	100	97.221	Heterocephalus_glaber_female
ENSSPAG00000015639	prpf8	100	97.221	ENSHGLG00100016494	PRPF8	100	97.221	Heterocephalus_glaber_male
ENSSPAG00000015639	prpf8	100	98.504	ENSHCOG00000016414	prpf8	100	98.504	Hippocampus_comes
ENSSPAG00000015639	prpf8	100	98.417	ENSIPUG00000023230	prpf8	100	98.417	Ictalurus_punctatus
ENSSPAG00000015639	prpf8	100	97.221	ENSSTOG00000005128	PRPF8	100	97.221	Ictidomys_tridecemlineatus
ENSSPAG00000015639	prpf8	100	95.083	ENSJJAG00000021159	Prpf8	100	94.867	Jaculus_jaculus
ENSSPAG00000015639	prpf8	99	98.626	ENSKMAG00000016118	prpf8	99	98.626	Kryptolebias_marmoratus
ENSSPAG00000015639	prpf8	100	98.888	ENSLBEG00000026903	prpf8	100	98.888	Labrus_bergylta
ENSSPAG00000015639	prpf8	95	94.905	ENSLACG00000010479	PRPF8	99	97.585	Latimeria_chalumnae
ENSSPAG00000015639	prpf8	99	98.033	ENSLOCG00000005409	prpf8	99	98.033	Lepisosteus_oculatus
ENSSPAG00000015639	prpf8	100	97.221	ENSLAFG00000015445	PRPF8	100	97.221	Loxodonta_africana
ENSSPAG00000015639	prpf8	100	97.221	ENSMFAG00000039995	PRPF8	100	97.221	Macaca_fascicularis
ENSSPAG00000015639	prpf8	100	97.221	ENSMMUG00000004820	PRPF8	100	97.221	Macaca_mulatta
ENSSPAG00000015639	prpf8	100	97.221	ENSMNEG00000035713	PRPF8	100	97.221	Macaca_nemestrina
ENSSPAG00000015639	prpf8	100	97.221	ENSMLEG00000037937	PRPF8	100	97.221	Mandrillus_leucophaeus
ENSSPAG00000015639	prpf8	100	99.102	ENSMAMG00000008919	prpf8	100	99.102	Mastacembelus_armatus
ENSSPAG00000015639	prpf8	100	98.383	ENSMZEG00005015073	prpf8	100	98.383	Maylandia_zebra
ENSSPAG00000015639	prpf8	100	97.263	ENSMGAG00000004769	PRPF8	100	97.263	Meleagris_gallopavo
ENSSPAG00000015639	prpf8	100	97.221	ENSMICG00000010320	PRPF8	100	97.221	Microcebus_murinus
ENSSPAG00000015639	prpf8	100	97.221	ENSMOCG00000016838	Prpf8	100	97.221	Microtus_ochrogaster
ENSSPAG00000015639	prpf8	100	98.546	ENSMMOG00000011887	prpf8	100	98.546	Mola_mola
ENSSPAG00000015639	prpf8	100	97.010	ENSMODG00000010480	PRPF8	100	97.010	Monodelphis_domestica
ENSSPAG00000015639	prpf8	97	98.628	ENSMALG00000003558	prpf8	100	98.628	Monopterus_albus
ENSSPAG00000015639	prpf8	100	97.178	MGP_CAROLIEiJ_G0016740	Prpf8	100	97.178	Mus_caroli
ENSSPAG00000015639	prpf8	100	97.178	ENSMUSG00000020850	Prpf8	100	97.178	Mus_musculus
ENSSPAG00000015639	prpf8	100	97.136	MGP_PahariEiJ_G0017877	Prpf8	100	97.136	Mus_pahari
ENSSPAG00000015639	prpf8	100	97.178	MGP_SPRETEiJ_G0017583	Prpf8	100	97.178	Mus_spretus
ENSSPAG00000015639	prpf8	100	97.221	ENSMPUG00000013227	PRPF8	100	97.221	Mustela_putorius_furo
ENSSPAG00000015639	prpf8	100	97.096	ENSMLUG00000002666	PRPF8	100	97.096	Myotis_lucifugus
ENSSPAG00000015639	prpf8	100	95.468	ENSNGAG00000005305	Prpf8	100	95.468	Nannospalax_galili
ENSSPAG00000015639	prpf8	100	98.426	ENSNBRG00000013127	prpf8	100	98.426	Neolamprologus_brichardi
ENSSPAG00000015639	prpf8	97	95.950	ENSNLEG00000000897	PRPF8	98	95.950	Nomascus_leucogenys
ENSSPAG00000015639	prpf8	98	95.871	ENSMEUG00000015999	PRPF8	100	95.871	Notamacropus_eugenii
ENSSPAG00000015639	prpf8	100	95.468	ENSOPRG00000003102	PRPF8	100	95.468	Ochotona_princeps
ENSSPAG00000015639	prpf8	100	97.221	ENSODEG00000008468	PRPF8	100	97.221	Octodon_degus
ENSSPAG00000015639	prpf8	100	98.383	ENSONIG00000008153	prpf8	100	98.383	Oreochromis_niloticus
ENSSPAG00000015639	prpf8	82	99.159	ENSOANG00000004250	PRPF8	97	99.159	Ornithorhynchus_anatinus
ENSSPAG00000015639	prpf8	100	97.221	ENSOCUG00000000081	PRPF8	100	97.221	Oryctolagus_cuniculus
ENSSPAG00000015639	prpf8	100	97.961	ENSORLG00000008036	prpf8	100	97.961	Oryzias_latipes
ENSSPAG00000015639	prpf8	100	97.919	ENSORLG00020021070	prpf8	100	97.919	Oryzias_latipes_hni
ENSSPAG00000015639	prpf8	100	97.961	ENSORLG00015002340	prpf8	100	97.961	Oryzias_latipes_hsok
ENSSPAG00000015639	prpf8	100	96.474	ENSOMEG00000016866	prpf8	100	96.474	Oryzias_melastigma
ENSSPAG00000015639	prpf8	100	97.096	ENSOARG00000013312	PRPF8	100	97.096	Ovis_aries
ENSSPAG00000015639	prpf8	100	97.221	ENSPPAG00000042753	PRPF8	100	97.221	Pan_paniscus
ENSSPAG00000015639	prpf8	100	97.221	ENSPPRG00000008746	PRPF8	100	97.221	Panthera_pardus
ENSSPAG00000015639	prpf8	100	97.136	ENSPTIG00000019200	PRPF8	100	97.136	Panthera_tigris_altaica
ENSSPAG00000015639	prpf8	100	97.221	ENSPTRG00000039576	PRPF8	100	97.221	Pan_troglodytes
ENSSPAG00000015639	prpf8	98	97.654	ENSPANG00000024607	PRPF8	98	97.654	Papio_anubis
ENSSPAG00000015639	prpf8	100	98.167	ENSPKIG00000011201	prpf8	100	98.167	Paramormyrops_kingsleyae
ENSSPAG00000015639	prpf8	100	97.134	ENSPSIG00000013393	PRPF8	100	97.134	Pelodiscus_sinensis
ENSSPAG00000015639	prpf8	100	97.221	ENSPEMG00000021699	Prpf8	100	97.221	Peromyscus_maniculatus_bairdii
ENSSPAG00000015639	prpf8	96	93.318	ENSPMAG00000005438	prpf8	100	93.363	Petromyzon_marinus
ENSSPAG00000015639	prpf8	100	97.010	ENSPCIG00000022603	PRPF8	100	97.546	Phascolarctos_cinereus
ENSSPAG00000015639	prpf8	100	97.837	ENSPFOG00000007005	prpf8	100	97.795	Poecilia_formosa
ENSSPAG00000015639	prpf8	100	97.006	ENSPLAG00000020777	prpf8	100	97.006	Poecilia_latipinna
ENSSPAG00000015639	prpf8	100	97.837	ENSPMEG00000004051	prpf8	100	97.795	Poecilia_mexicana
ENSSPAG00000015639	prpf8	100	98.460	ENSPREG00000021902	prpf8	100	98.460	Poecilia_reticulata
ENSSPAG00000015639	prpf8	100	97.221	ENSPPYG00000007777	PRPF8	100	97.221	Pongo_abelii
ENSSPAG00000015639	prpf8	90	97.030	ENSPCAG00000008938	PRPF8	90	97.030	Procavia_capensis
ENSSPAG00000015639	prpf8	100	97.221	ENSPCOG00000015182	PRPF8	100	97.221	Propithecus_coquereli
ENSSPAG00000015639	prpf8	93	97.838	ENSPVAG00000002134	PRPF8	93	97.838	Pteropus_vampyrus
ENSSPAG00000015639	prpf8	100	98.546	ENSPNYG00000016356	prpf8	100	98.546	Pundamilia_nyererei
ENSSPAG00000015639	prpf8	100	98.546	ENSPNAG00000009247	prpf8	100	98.546	Pygocentrus_nattereri
ENSSPAG00000015639	prpf8	100	97.178	ENSRNOG00000003495	Prpf8	100	97.178	Rattus_norvegicus
ENSSPAG00000015639	prpf8	100	97.221	ENSRBIG00000031219	PRPF8	100	97.221	Rhinopithecus_bieti
ENSSPAG00000015639	prpf8	100	97.221	ENSRROG00000038014	PRPF8	100	97.221	Rhinopithecus_roxellana
ENSSPAG00000015639	prpf8	98	61.913	YHR165C	PRP8	95	61.999	Saccharomyces_cerevisiae
ENSSPAG00000015639	prpf8	100	97.221	ENSSBOG00000029717	PRPF8	100	97.221	Saimiri_boliviensis_boliviensis
ENSSPAG00000015639	prpf8	100	96.967	ENSSHAG00000006167	PRPF8	100	96.967	Sarcophilus_harrisii
ENSSPAG00000015639	prpf8	100	98.164	ENSSFOG00015013905	prpf8	100	98.164	Scleropages_formosus
ENSSPAG00000015639	prpf8	100	98.888	ENSSMAG00000017736	prpf8	100	98.888	Scophthalmus_maximus
ENSSPAG00000015639	prpf8	100	99.187	ENSSDUG00000003029	prpf8	100	99.187	Seriola_dumerili
ENSSPAG00000015639	prpf8	68	99.124	ENSSLDG00000017096	prpf8	100	99.124	Seriola_lalandi_dorsalis
ENSSPAG00000015639	prpf8	87	94.436	ENSSARG00000002892	PRPF8	87	94.436	Sorex_araneus
ENSSPAG00000015639	prpf8	100	97.136	ENSSPUG00000007463	PRPF8	100	97.136	Sphenodon_punctatus
ENSSPAG00000015639	prpf8	100	97.221	ENSSSCG00000017817	PRPF8	100	97.221	Sus_scrofa
ENSSPAG00000015639	prpf8	100	97.263	ENSTGUG00000005648	-	100	97.263	Taeniopygia_guttata
ENSSPAG00000015639	prpf8	51	96.335	ENSTGUG00000015597	-	95	96.335	Taeniopygia_guttata
ENSSPAG00000015639	prpf8	100	98.546	ENSTRUG00000015906	prpf8	100	98.546	Takifugu_rubripes
ENSSPAG00000015639	prpf8	95	98.746	ENSTNIG00000003460	prpf8	99	98.746	Tetraodon_nigroviridis
ENSSPAG00000015639	prpf8	93	98.026	ENSTBEG00000006431	PRPF8	93	98.026	Tupaia_belangeri
ENSSPAG00000015639	prpf8	100	96.622	ENSTTRG00000006869	PRPF8	100	96.622	Tursiops_truncatus
ENSSPAG00000015639	prpf8	54	95.566	ENSUAMG00000015644	-	96	94.646	Ursus_americanus
ENSSPAG00000015639	prpf8	100	96.965	ENSUMAG00000009385	PRPF8	100	96.965	Ursus_maritimus
ENSSPAG00000015639	prpf8	71	98.621	ENSVPAG00000006063	-	71	98.621	Vicugna_pacos
ENSSPAG00000015639	prpf8	100	97.221	ENSVVUG00000021695	PRPF8	99	97.221	Vulpes_vulpes
ENSSPAG00000015639	prpf8	100	97.093	ENSXETG00000022259	prpf8	100	97.093	Xenopus_tropicalis
ENSSPAG00000015639	prpf8	100	98.377	ENSXCOG00000012775	prpf8	100	98.377	Xiphophorus_couchianus
ENSSPAG00000015639	prpf8	100	98.334	ENSXMAG00000008505	prpf8	100	98.334	Xiphophorus_maculatus