EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000016167 (Gene tree)
Gene ID: 103363630
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 2857 bases
Position: chrKK580746.1:95096-97952
Accession: 103363630
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000021428	MMR_HSR1	PF01926.23	7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000021760	-	657	XM_008290461	ENSSPAP00000021428	218 (aa)	XP_008288683	-

Gene Model

Click here to download ENSSPAG00000016167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000016167's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000016167	rab42a	78	42.690	ENSSPAG00000019393	RAB11A	83	42.690
ENSSPAG00000016167	rab42a	72	39.490	ENSSPAG00000001067	-	75	39.490
ENSSPAG00000016167	rab42a	75	31.325	ENSSPAG00000018992	si:cabz01085950.1	82	31.325
ENSSPAG00000016167	rab42a	74	34.337	ENSSPAG00000023345	RAB7A	79	34.337
ENSSPAG00000016167	rab42a	85	30.151	ENSSPAG00000023440	rasl11a	75	30.151
ENSSPAG00000016167	rab42a	72	40.625	ENSSPAG00000005785	rab33a	69	40.625
ENSSPAG00000016167	rab42a	75	37.725	ENSSPAG00000009806	rab9b	75	37.725
ENSSPAG00000016167	rab42a	96	37.383	ENSSPAG00000015211	rab15	76	42.331
ENSSPAG00000016167	rab42a	98	38.785	ENSSPAG00000005141	-	97	38.785
ENSSPAG00000016167	rab42a	75	36.585	ENSSPAG00000006436	rab5c	74	36.585
ENSSPAG00000016167	rab42a	78	42.012	ENSSPAG00000022440	-	84	42.012
ENSSPAG00000016167	rab42a	84	41.530	ENSSPAG00000011419	rab11bb	83	41.530
ENSSPAG00000016167	rab42a	98	38.318	ENSSPAG00000022927	rab14	97	38.318
ENSSPAG00000016167	rab42a	67	41.892	ENSSPAG00000006404	zgc:101559	63	41.892
ENSSPAG00000016167	rab42a	80	41.714	ENSSPAG00000006302	si:dkey-16l2.16	82	41.714
ENSSPAG00000016167	rab42a	76	37.952	ENSSPAG00000022624	-	73	37.952
ENSSPAG00000016167	rab42a	97	33.175	ENSSPAG00000017366	rab6ba	87	34.973
ENSSPAG00000016167	rab42a	78	32.948	ENSSPAG00000002062	RAB29	83	32.948
ENSSPAG00000016167	rab42a	75	34.756	ENSSPAG00000021333	rab22a	84	34.756
ENSSPAG00000016167	rab42a	69	33.775	ENSSPAG00000007357	hrasb	85	32.927
ENSSPAG00000016167	rab42a	72	39.490	ENSSPAG00000006001	rab41	73	39.490
ENSSPAG00000016167	rab42a	97	30.516	ENSSPAG00000018203	rab36	62	35.404
ENSSPAG00000016167	rab42a	73	44.375	ENSSPAG00000013422	rab30	78	44.375
ENSSPAG00000016167	rab42a	78	34.118	ENSSPAG00000004878	rras	85	34.118
ENSSPAG00000016167	rab42a	84	40.217	ENSSPAG00000022676	rab1ba	91	40.217
ENSSPAG00000016167	rab42a	78	43.023	ENSSPAG00000010822	rab12	70	43.023
ENSSPAG00000016167	rab42a	78	34.104	ENSSPAG00000002801	rab34b	68	34.104
ENSSPAG00000016167	rab42a	76	41.212	ENSSPAG00000020875	rab18b	84	40.000
ENSSPAG00000016167	rab42a	75	35.366	ENSSPAG00000015678	rab5aa	74	35.802
ENSSPAG00000016167	rab42a	100	54.587	ENSSPAG00000010919	-	93	58.291
ENSSPAG00000016167	rab42a	84	42.077	ENSSPAG00000017313	rab11ba	83	42.077
ENSSPAG00000016167	rab42a	76	38.235	ENSSPAG00000007900	rab9a	82	38.235
ENSSPAG00000016167	rab42a	76	35.542	ENSSPAG00000015015	rras2	81	35.542
ENSSPAG00000016167	rab42a	69	44.737	ENSSPAG00000004801	rab33ba	63	44.737
ENSSPAG00000016167	rab42a	83	41.111	ENSSPAG00000012060	rab25b	86	42.197
ENSSPAG00000016167	rab42a	82	42.135	ENSSPAG00000012564	-	87	42.135
ENSSPAG00000016167	rab42a	74	34.337	ENSSPAG00000001423	-	79	34.337
ENSSPAG00000016167	rab42a	75	39.521	ENSSPAG00000011224	-	76	39.521
ENSSPAG00000016167	rab42a	86	42.328	ENSSPAG00000013533	zgc:171927	87	42.328
ENSSPAG00000016167	rab42a	84	41.530	ENSSPAG00000014559	-	83	41.530
ENSSPAG00000016167	rab42a	67	41.447	ENSSPAG00000010224	-	67	41.060
ENSSPAG00000016167	rab42a	55	31.092	ENSSPAG00000002659	RAP2B	96	31.061
ENSSPAG00000016167	rab42a	78	32.370	ENSSPAG00000017348	rab34a	65	32.370
ENSSPAG00000016167	rab42a	82	42.135	ENSSPAG00000015564	rab1ab	84	40.513
ENSSPAG00000016167	rab42a	98	38.140	ENSSPAG00000012044	rab11al	84	41.530
ENSSPAG00000016167	rab42a	97	37.559	ENSSPAG00000015817	rab25a	79	44.048
ENSSPAG00000016167	rab42a	76	31.515	ENSSPAG00000012674	rhebl1	87	31.515
ENSSPAG00000016167	rab42a	82	35.955	ENSSPAG00000009276	rab6bb	92	35.955
ENSSPAG00000016167	rab42a	100	54.128	ENSSPAG00000010771	RAB39B	93	57.789
ENSSPAG00000016167	rab42a	99	58.182	ENSSPAG00000012955	si:dkey-34d22.5	87	63.212
ENSSPAG00000016167	rab42a	73	41.875	ENSSPAG00000023185	RAB15	73	42.308
ENSSPAG00000016167	rab42a	72	34.177	ENSSPAG00000010373	rab23	74	34.641
ENSSPAG00000016167	rab42a	85	33.333	ENSSPAG00000005867	rheb	94	33.333
ENSSPAG00000016167	rab42a	73	32.919	ENSSPAG00000009928	kras	98	31.414
ENSSPAG00000016167	rab42a	75	43.293	ENSSPAG00000008400	rab35b	80	43.293

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000016167	rab42a	100	98.624	ENSAPOG00000009188	rab42a	100	98.624	Acanthochromis_polyacanthus
ENSSPAG00000016167	rab42a	100	98.624	ENSACIG00000003102	rab42a	100	98.624	Amphilophus_citrinellus
ENSSPAG00000016167	rab42a	100	98.165	ENSAOCG00000012921	rab42a	83	98.165	Amphiprion_ocellaris
ENSSPAG00000016167	rab42a	100	98.165	ENSAPEG00000007713	rab42a	83	98.165	Amphiprion_percula
ENSSPAG00000016167	rab42a	100	95.872	ENSATEG00000009052	rab42a	100	95.872	Anabas_testudineus
ENSSPAG00000016167	rab42a	100	97.706	ENSACLG00000007514	rab42a	100	97.706	Astatotilapia_calliptera
ENSSPAG00000016167	rab42a	100	91.743	ENSAMXG00000032729	rab42a	100	90.367	Astyanax_mexicanus
ENSSPAG00000016167	rab42a	100	94.954	ENSCSEG00000010582	rab42a	100	94.954	Cynoglossus_semilaevis
ENSSPAG00000016167	rab42a	100	47.032	ENSDARG00000102580	CU571310.1	93	49.746	Danio_rerio
ENSSPAG00000016167	rab42a	100	91.284	ENSDARG00000034215	rab42a	100	89.908	Danio_rerio
ENSSPAG00000016167	rab42a	100	90.367	ENSELUG00000010345	rab42a	100	90.367	Esox_lucius
ENSSPAG00000016167	rab42a	100	96.789	ENSFHEG00000013106	rab42a	100	96.789	Fundulus_heteroclitus
ENSSPAG00000016167	rab42a	100	95.872	ENSGAFG00000002141	rab42a	100	95.872	Gambusia_affinis
ENSSPAG00000016167	rab42a	100	97.706	ENSHBUG00000015126	rab42a	82	97.706	Haplochromis_burtoni
ENSSPAG00000016167	rab42a	100	88.532	ENSIPUG00000011376	rab42a	100	87.156	Ictalurus_punctatus
ENSSPAG00000016167	rab42a	100	96.789	ENSKMAG00000007267	rab42a	100	96.789	Kryptolebias_marmoratus
ENSSPAG00000016167	rab42a	100	98.165	ENSLBEG00000001193	rab42a	100	98.165	Labrus_bergylta
ENSSPAG00000016167	rab42a	100	64.679	ENSLACG00000012755	-	94	68.500	Latimeria_chalumnae
ENSSPAG00000016167	rab42a	100	83.486	ENSLOCG00000003453	rab42a	94	88.000	Lepisosteus_oculatus
ENSSPAG00000016167	rab42a	100	51.598	ENSLOCG00000015825	-	99	51.598	Lepisosteus_oculatus
ENSSPAG00000016167	rab42a	100	99.083	ENSMAMG00000002296	rab42a	100	99.083	Mastacembelus_armatus
ENSSPAG00000016167	rab42a	100	97.706	ENSMZEG00005012460	rab42a	82	97.706	Maylandia_zebra
ENSSPAG00000016167	rab42a	100	94.495	ENSMMOG00000014358	rab42a	100	94.495	Mola_mola
ENSSPAG00000016167	rab42a	100	98.165	ENSNBRG00000021487	rab42a	82	98.165	Neolamprologus_brichardi
ENSSPAG00000016167	rab42a	100	97.248	ENSORLG00000022335	rab42a	100	97.248	Oryzias_latipes
ENSSPAG00000016167	rab42a	100	97.248	ENSORLG00020013895	rab42a	100	97.248	Oryzias_latipes_hni
ENSSPAG00000016167	rab42a	100	97.248	ENSORLG00015004273	rab42a	100	97.248	Oryzias_latipes_hsok
ENSSPAG00000016167	rab42a	100	97.248	ENSOMEG00000020418	rab42a	100	97.248	Oryzias_melastigma
ENSSPAG00000016167	rab42a	99	47.005	ENSPKIG00000015234	-	93	50.000	Paramormyrops_kingsleyae
ENSSPAG00000016167	rab42a	100	78.539	ENSPKIG00000021215	-	93	82.412	Paramormyrops_kingsleyae
ENSSPAG00000016167	rab42a	90	97.462	ENSPMGG00000024112	rab42a	90	97.462	Periophthalmus_magnuspinnatus
ENSSPAG00000016167	rab42a	100	94.954	ENSPFOG00000004838	rab42a	82	94.954	Poecilia_formosa
ENSSPAG00000016167	rab42a	100	95.413	ENSPLAG00000005628	rab42a	100	95.413	Poecilia_latipinna
ENSSPAG00000016167	rab42a	100	94.954	ENSPMEG00000019497	rab42a	100	94.954	Poecilia_mexicana
ENSSPAG00000016167	rab42a	100	95.872	ENSPREG00000013962	rab42a	100	95.872	Poecilia_reticulata
ENSSPAG00000016167	rab42a	100	97.706	ENSPNYG00000010325	rab42a	82	97.706	Pundamilia_nyererei
ENSSPAG00000016167	rab42a	100	91.284	ENSPNAG00000016567	rab42a	100	89.908	Pygocentrus_nattereri
ENSSPAG00000016167	rab42a	100	46.575	ENSSFOG00015016000	-	97	46.119	Scleropages_formosus
ENSSPAG00000016167	rab42a	100	85.321	ENSSFOG00015020732	rab42a	100	84.862	Scleropages_formosus
ENSSPAG00000016167	rab42a	100	95.413	ENSSMAG00000020311	rab42a	100	95.413	Scophthalmus_maximus
ENSSPAG00000016167	rab42a	100	98.165	ENSSDUG00000011851	rab42a	100	98.165	Seriola_dumerili
ENSSPAG00000016167	rab42a	100	98.165	ENSSLDG00000020354	rab42a	100	98.165	Seriola_lalandi_dorsalis
ENSSPAG00000016167	rab42a	100	97.706	ENSTRUG00000010224	rab42a	100	97.706	Takifugu_rubripes
ENSSPAG00000016167	rab42a	100	96.330	ENSXCOG00000003428	rab42a	100	96.330	Xiphophorus_couchianus
ENSSPAG00000016167	rab42a	100	96.330	ENSXMAG00000028376	rab42a	100	96.330	Xiphophorus_maculatus