EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000016190 (Gene tree)
Gene ID: -
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 82412 bases
Position: chrKK580245.1:358449-440860
Accession: ZDB-GENE-050208-34
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000021487	SRRM_C	PF15230.6	2e-24	1	1
ENSSPAP00000021476	SRRM_C	PF15230.6	3.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000021821	-	1005	-	ENSSPAP00000021487	334 (aa)	-	-
ENSSPAT00000021810	-	1416	-	ENSSPAP00000021476	471 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000016190's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000016190's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000016190	srrm4	59	94.366	ENSAPOG00000010969	srrm4	80	79.037	Acanthochromis_polyacanthus
ENSSPAG00000016190	srrm4	99	71.687	ENSACIG00000002171	srrm4	94	65.885	Amphilophus_citrinellus
ENSSPAG00000016190	srrm4	54	84.167	ENSAOCG00000019891	srrm4	80	79.944	Amphiprion_ocellaris
ENSSPAG00000016190	srrm4	54	84.167	ENSAPEG00000011132	srrm4	80	76.257	Amphiprion_percula
ENSSPAG00000016190	srrm4	99	79.762	ENSATEG00000005330	srrm4	99	64.301	Anabas_testudineus
ENSSPAG00000016190	srrm4	99	77.193	ENSACLG00000023532	srrm4	99	74.526	Astatotilapia_calliptera
ENSSPAG00000016190	srrm4	96	60.429	ENSCSEG00000007689	-	86	76.190	Cynoglossus_semilaevis
ENSSPAG00000016190	srrm4	87	45.934	ENSELUG00000004986	srrm4	62	48.867	Esox_lucius
ENSSPAG00000016190	srrm4	99	71.302	ENSFHEG00000005091	srrm4	86	71.687	Fundulus_heteroclitus
ENSSPAG00000016190	srrm4	83	47.000	ENSGMOG00000006714	srrm4	62	48.287	Gadus_morhua
ENSSPAG00000016190	srrm4	84	94.444	ENSGAFG00000006706	srrm4	95	82.927	Gambusia_affinis
ENSSPAG00000016190	srrm4	98	79.941	ENSHBUG00000010505	srrm4	80	74.640	Haplochromis_burtoni
ENSSPAG00000016190	srrm4	60	82.394	ENSLBEG00000008471	srrm4	80	70.986	Labrus_bergylta
ENSSPAG00000016190	srrm4	99	70.958	ENSMAMG00000004280	srrm4	99	66.385	Mastacembelus_armatus
ENSSPAG00000016190	srrm4	99	77.193	ENSMZEG00005021733	srrm4	99	74.526	Maylandia_zebra
ENSSPAG00000016190	srrm4	99	71.171	ENSMMOG00000000228	srrm4	99	58.577	Mola_mola
ENSSPAG00000016190	srrm4	85	71.918	ENSMALG00000001422	srrm4	74	72.792	Monopterus_albus
ENSSPAG00000016190	srrm4	99	77.015	ENSNBRG00000015313	srrm4	99	68.724	Neolamprologus_brichardi
ENSSPAG00000016190	srrm4	97	77.810	ENSONIG00000010552	srrm4	79	73.803	Oreochromis_niloticus
ENSSPAG00000016190	srrm4	71	80.233	ENSORLG00000001177	srrm4	100	57.660	Oryzias_latipes
ENSSPAG00000016190	srrm4	82	75.000	ENSORLG00015019143	srrm4	99	53.731	Oryzias_latipes_hsok
ENSSPAG00000016190	srrm4	59	78.169	ENSOMEG00000012376	srrm4	55	58.571	Oryzias_melastigma
ENSSPAG00000016190	srrm4	99	53.353	ENSPMGG00000008387	srrm4	91	49.127	Periophthalmus_magnuspinnatus
ENSSPAG00000016190	srrm4	99	68.513	ENSPLAG00000002006	srrm4	90	65.116	Poecilia_latipinna
ENSSPAG00000016190	srrm4	99	69.643	ENSPMEG00000017802	srrm4	90	65.079	Poecilia_mexicana
ENSSPAG00000016190	srrm4	80	90.625	ENSPREG00000004567	srrm4	95	59.660	Poecilia_reticulata
ENSSPAG00000016190	srrm4	99	78.209	ENSPNYG00000007785	srrm4	99	72.314	Pundamilia_nyererei
ENSSPAG00000016190	srrm4	99	70.997	ENSSMAG00000012257	srrm4	96	67.627	Scophthalmus_maximus
ENSSPAG00000016190	srrm4	99	80.282	ENSSDUG00000017519	srrm4	100	78.869	Seriola_dumerili
ENSSPAG00000016190	srrm4	99	81.556	ENSSLDG00000015130	srrm4	98	67.742	Seriola_lalandi_dorsalis
ENSSPAG00000016190	srrm4	98	70.115	ENSXMAG00000002658	srrm4	76	63.018	Xiphophorus_maculatus