EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSPAG00000016341 (Gene tree)
Gene ID
-
Gene Symbol
polr1a
Alias
fa26a03|sb:cb935|wu:fa26a03
Full Name
RNA polymerase I subunit A
Gene Type
protein_coding
Species
Stegastes_partitus
Status
putative
Strand
Plus strand
Length
20504 bases
Position
chrKK580612.1:385446-405949
Accession
103361905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPAP00000022282RNA_pol_Rpb1_5PF04998.171.3e-3111
ENSSPAP00000022254RNA_pol_Rpb1_5PF04998.171.5e-3111
ENSSPAP00000022141RNA_pol_Rpb1_5PF04998.171.6e-3111
ENSSPAP00000022312RNA_pol_Rpb1_5PF04998.171.9e-3111
ENSSPAP00000022412RNA_pol_Rpb1_4PF05000.171e-2111
ENSSPAP00000022141RNA_pol_Rpb1_4PF05000.171.3e-2111
ENSSPAP00000022312RNA_pol_Rpb1_4PF05000.171.3e-2111
ENSSPAP00000022282RNA_pol_Rpb1_4PF05000.171.3e-2111
ENSSPAP00000022254RNA_pol_Rpb1_4PF05000.171.4e-2111
ENSSPAP00000022412RNA_pol_Rpb1_2PF00623.208.4e-6911
ENSSPAP00000022141RNA_pol_Rpb1_2PF00623.201.1e-6811
ENSSPAP00000022312RNA_pol_Rpb1_2PF00623.201.2e-6811
ENSSPAP00000022282RNA_pol_Rpb1_2PF00623.201.2e-6811
ENSSPAP00000022254RNA_pol_Rpb1_2PF00623.201.2e-6811
ENSSPAP00000022412RNA_pol_Rpb1_3PF04983.183.8e-3711
ENSSPAP00000022254RNA_pol_Rpb1_3PF04983.184.6e-3711
ENSSPAP00000022282RNA_pol_Rpb1_3PF04983.184.6e-3711
ENSSPAP00000022312RNA_pol_Rpb1_3PF04983.184.7e-3711
ENSSPAP00000022141RNA_pol_Rpb1_3PF04983.185.1e-3711
ENSSPAP00000022254RNA_pol_Rpb1_1PF04997.122.2e-2211
ENSSPAP00000022312RNA_pol_Rpb1_1PF04997.122.6e-2211
ENSSPAP00000022368RNA_pol_Rpb1_1PF04997.122.3e-2111
ENSSPAP00000022282RNA_pol_Rpb1_1PF04997.124.1e-2011
ENSSPAP00000022141RNA_pol_Rpb1_1PF04997.128.3e-2011
ENSSPAP00000022359RNA_pol_Rpb1_1PF04997.127.8e-1911
ENSSPAP00000022412RNA_pol_Rpb1_1PF04997.121.1e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPAT00000022492-3360-ENSSPAP000000221411119 (aa)--
ENSSPAT00000022664-3297XM_008288116ENSSPAP000000223121098 (aa)XP_008286338-
ENSSPAT00000022767-2703-ENSSPAP00000022412900 (aa)--
ENSSPAT00000022606-3438-ENSSPAP000000222541145 (aa)--
ENSSPAT00000022723-738-ENSSPAP00000022368245 (aa)--
ENSSPAT00000022634-3366-ENSSPAP000000222821121 (aa)--
ENSSPAT00000022714-681-ENSSPAP00000022359226 (aa)--
Gene Model
Click here to download ENSSPAG00000016341's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000016341's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSPAG00000016341polr1a8330.041ENSSPAG00000017712polr3a6630.595
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPAG00000016341polr1a9471.995ENSG00000068654POLR1A6671.995Homo_sapiens
ENSSPAG00000016341polr1a9492.677ENSAPOG00000017945polr1a9292.792Acanthochromis_polyacanthus
ENSSPAG00000016341polr1a9473.016ENSAMEG00000005807POLR1A8976.551Ailuropoda_melanoleuca
ENSSPAG00000016341polr1a10084.973ENSACIG00000022147polr1a7084.773Amphilophus_citrinellus
ENSSPAG00000016341polr1a9591.705ENSAOCG00000017336polr1a6491.818Amphiprion_ocellaris
ENSSPAG00000016341polr1a9591.818ENSAPEG00000016105polr1a6491.932Amphiprion_percula
ENSSPAG00000016341polr1a9588.523ENSATEG00000016773polr1a6488.523Anabas_testudineus
ENSSPAG00000016341polr1a8170.197ENSAPLG00000013871POLR1A6369.817Anas_platyrhynchos
ENSSPAG00000016341polr1a9371.676ENSACAG00000012141POLR1A6371.676Anolis_carolinensis
ENSSPAG00000016341polr1a9471.315ENSANAG00000033927POLR1A6371.315Aotus_nancymaae
ENSSPAG00000016341polr1a9978.392ENSACLG00000020541polr1a6878.392Astatotilapia_calliptera
ENSSPAG00000016341polr1a9153.617ENSAMXG00000011559-8553.617Astyanax_mexicanus
ENSSPAG00000016341polr1a9672.449ENSBTAG00000006481POLR1A6672.449Bos_taurus
ENSSPAG00000016341polr1a9541.356WBGene00012999rpoa-16241.695Caenorhabditis_elegans
ENSSPAG00000016341polr1a9470.635ENSCJAG00000019547POLR1A6370.635Callithrix_jacchus
ENSSPAG00000016341polr1a9573.029ENSCAFG00000007613POLR1A6473.029Canis_familiaris
ENSSPAG00000016341polr1a9472.676ENSCAFG00020014752POLR1A9766.183Canis_lupus_dingo
ENSSPAG00000016341polr1a9672.562ENSCHIG00000018204POLR1A7272.562Capra_hircus
ENSSPAG00000016341polr1a9471.995ENSTSYG00000002761POLR1A6471.995Carlito_syrichta
ENSSPAG00000016341polr1a9071.836ENSCAPG00000010132POLR1A6471.836Cavia_aperea
ENSSPAG00000016341polr1a9472.406ENSCPOG00000012350POLR1A6372.406Cavia_porcellus
ENSSPAG00000016341polr1a9471.429ENSCCAG00000019839POLR1A6371.429Cebus_capucinus
ENSSPAG00000016341polr1a9472.336ENSCATG00000029786POLR1A6372.336Cercocebus_atys
ENSSPAG00000016341polr1a9471.769ENSCLAG00000005187POLR1A6371.769Chinchilla_lanigera
ENSSPAG00000016341polr1a9471.995ENSCSAG00000016251POLR1A6372.222Chlorocebus_sabaeus
ENSSPAG00000016341polr1a8180.905ENSCHOG00000003766-8380.905Choloepus_hoffmanni
ENSSPAG00000016341polr1a9472.637ENSCPBG00000001115POLR1A6672.637Chrysemys_picta_bellii
ENSSPAG00000016341polr1a9749.572ENSCSAVG00000007184-7049.488Ciona_savignyi
ENSSPAG00000016341polr1a9467.044ENSCANG00000031785POLR1A6367.044Colobus_angolensis_palliatus
ENSSPAG00000016341polr1a8979.937ENSCGRG00001006651Polr1a6279.937Cricetulus_griseus_chok1gshd
ENSSPAG00000016341polr1a9846.875ENSCGRG00000007004-10046.875Cricetulus_griseus_crigri
ENSSPAG00000016341polr1a9976.673ENSCSEG00000020190polr1a6977.269Cynoglossus_semilaevis
ENSSPAG00000016341polr1a9583.750ENSCVAG00000020941polr1a6383.750Cyprinodon_variegatus
ENSSPAG00000016341polr1a9477.412ENSDARG00000098375polr1a6577.412Danio_rerio
ENSSPAG00000016341polr1a9470.938ENSDNOG00000010829POLR1A6370.522Dasypus_novemcinctus
ENSSPAG00000016341polr1a9471.995ENSDORG00000008298Polr1a6472.706Dipodomys_ordii
ENSSPAG00000016341polr1a9943.467FBgn0019938RpI16549.213Drosophila_melanogaster
ENSSPAG00000016341polr1a6879.821ENSETEG00000000412-5358.022Echinops_telfairi
ENSSPAG00000016341polr1a8049.603ENSEBUG00000005667-6846.146Eptatretus_burgeri
ENSSPAG00000016341polr1a9472.235ENSEASG00005001625POLR1A6572.235Equus_asinus_asinus
ENSSPAG00000016341polr1a9672.235ENSECAG00000030510-6872.235Equus_caballus
ENSSPAG00000016341polr1a9472.235ENSECAG00000036306-6772.892Equus_caballus
ENSSPAG00000016341polr1a9672.235ENSECAG00000010092POLR1A6772.892Equus_caballus
ENSSPAG00000016341polr1a9479.592ENSELUG00000012769polr1a6379.592Esox_lucius
ENSSPAG00000016341polr1a9672.789ENSFCAG00000008966POLR1A6572.789Felis_catus
ENSSPAG00000016341polr1a9271.477ENSFALG00000010082POLR1A6371.477Ficedula_albicollis
ENSSPAG00000016341polr1a9471.315ENSFDAG00000013726POLR1A6471.315Fukomys_damarensis
ENSSPAG00000016341polr1a9977.778ENSFHEG00000005996polr1a7078.307Fundulus_heteroclitus
ENSSPAG00000016341polr1a9969.348ENSGMOG00000002230polr1a6870.098Gadus_morhua
ENSSPAG00000016341polr1a9371.640ENSGALG00000038160-6971.640Gallus_gallus
ENSSPAG00000016341polr1a9385.352ENSGAFG00000015266polr1a6385.352Gambusia_affinis
ENSSPAG00000016341polr1a9982.633ENSGACG00000018791polr1a6583.124Gasterosteus_aculeatus
ENSSPAG00000016341polr1a8073.000ENSGAGG00000004984-9271.561Gopherus_agassizii
ENSSPAG00000016341polr1a6270.504ENSGAGG00000020105-7552.358Gopherus_agassizii
ENSSPAG00000016341polr1a9471.995ENSGGOG00000001788POLR1A6371.995Gorilla_gorilla
ENSSPAG00000016341polr1a9983.801ENSHBUG00000020021polr1a7781.866Haplochromis_burtoni
ENSSPAG00000016341polr1a9471.896ENSHGLG00000006334POLR1A6471.896Heterocephalus_glaber_female
ENSSPAG00000016341polr1a9471.493ENSHGLG00100006614POLR1A6471.493Heterocephalus_glaber_male
ENSSPAG00000016341polr1a9977.502ENSHCOG00000003345polr1a9962.406Hippocampus_comes
ENSSPAG00000016341polr1a9377.535ENSIPUG00000013174polr1a6477.816Ictalurus_punctatus
ENSSPAG00000016341polr1a9471.687ENSSTOG00000012580POLR1A6471.687Ictidomys_tridecemlineatus
ENSSPAG00000016341polr1a9570.964ENSJJAG00000013113Polr1a6570.964Jaculus_jaculus
ENSSPAG00000016341polr1a9587.159ENSKMAG00000007399polr1a6587.159Kryptolebias_marmoratus
ENSSPAG00000016341polr1a9981.737ENSLBEG00000015401polr1a6882.731Labrus_bergylta
ENSSPAG00000016341polr1a9167.372ENSLACG00000003218polr1a10066.196Latimeria_chalumnae
ENSSPAG00000016341polr1a9776.111ENSLOCG00000010881polr1a6676.865Lepisosteus_oculatus
ENSSPAG00000016341polr1a9472.260ENSLAFG00000014948POLR1A6372.260Loxodonta_africana
ENSSPAG00000016341polr1a9472.222ENSMFAG00000046097POLR1A6372.222Macaca_fascicularis
ENSSPAG00000016341polr1a9472.109ENSMMUG00000015815POLR1A6372.336Macaca_mulatta
ENSSPAG00000016341polr1a9472.222ENSMNEG00000043313POLR1A6372.222Macaca_nemestrina
ENSSPAG00000016341polr1a9472.222ENSMLEG00000042428POLR1A6472.222Mandrillus_leucophaeus
ENSSPAG00000016341polr1a9587.159ENSMAMG00000016565polr1a6587.159Mastacembelus_armatus
ENSSPAG00000016341polr1a9689.103ENSMZEG00005004915polr1a6689.103Maylandia_zebra
ENSSPAG00000016341polr1a9372.120ENSMGAG00000013111POLR1A6272.120Meleagris_gallopavo
ENSSPAG00000016341polr1a8170.646ENSMAUG00000008497Polr1a5871.227Mesocricetus_auratus
ENSSPAG00000016341polr1a9471.769ENSMICG00000000757POLR1A6371.769Microcebus_murinus
ENSSPAG00000016341polr1a9572.426ENSMOCG00000000122Polr1a6772.426Microtus_ochrogaster
ENSSPAG00000016341polr1a9879.548ENSMMOG00000010216polr1a6979.548Mola_mola
ENSSPAG00000016341polr1a9570.162ENSMODG00000009335POLR1A6370.880Monodelphis_domestica
ENSSPAG00000016341polr1a9487.799ENSMALG00000013363polr1a6487.799Monopterus_albus
ENSSPAG00000016341polr1a9571.118MGP_CAROLIEiJ_G0028494Polr1a9948.043Mus_caroli
ENSSPAG00000016341polr1a9570.793ENSMUSG00000049553Polr1a9946.237Mus_musculus
ENSSPAG00000016341polr1a9472.336MGP_PahariEiJ_G0022230Polr1a9947.687Mus_pahari
ENSSPAG00000016341polr1a9570.901MGP_SPRETEiJ_G0029499Polr1a9946.237Mus_spretus
ENSSPAG00000016341polr1a9472.902ENSMPUG00000009135POLR1A6372.902Mustela_putorius_furo
ENSSPAG00000016341polr1a9570.901ENSMLUG00000015723POLR1A6570.901Myotis_lucifugus
ENSSPAG00000016341polr1a9472.172ENSNGAG00000017907Polr1a6472.172Nannospalax_galili
ENSSPAG00000016341polr1a9688.990ENSNBRG00000000519polr1a6688.990Neolamprologus_brichardi
ENSSPAG00000016341polr1a9470.975ENSNLEG00000002264POLR1A6370.975Nomascus_leucogenys
ENSSPAG00000016341polr1a8578.338ENSMEUG00000011665-5878.338Notamacropus_eugenii
ENSSPAG00000016341polr1a9069.149ENSOPRG00000008269POLR1A6369.149Ochotona_princeps
ENSSPAG00000016341polr1a9471.995ENSODEG00000003542POLR1A6471.995Octodon_degus
ENSSPAG00000016341polr1a9688.688ENSONIG00000015895polr1a6688.688Oreochromis_niloticus
ENSSPAG00000016341polr1a8448.235ENSOANG00000012384-10057.510Ornithorhynchus_anatinus
ENSSPAG00000016341polr1a9472.109ENSOCUG00000010138POLR1A6472.109Oryctolagus_cuniculus
ENSSPAG00000016341polr1a9585.568ENSORLG00000008753polr1a6485.568Oryzias_latipes
ENSSPAG00000016341polr1a10078.640ENSORLG00020020726polr1a7078.746Oryzias_latipes_hni
ENSSPAG00000016341polr1a9382.979ENSORLG00015016071polr1a6682.979Oryzias_latipes_hsok
ENSSPAG00000016341polr1a8665.315ENSOMEG00000019264-10060.498Oryzias_melastigma
ENSSPAG00000016341polr1a9471.542ENSOGAG00000004031POLR1A6371.542Otolemur_garnettii
ENSSPAG00000016341polr1a9672.676ENSOARG00000020601POLR1A6572.676Ovis_aries
ENSSPAG00000016341polr1a9471.882ENSPPAG00000042450POLR1A6371.882Pan_paniscus
ENSSPAG00000016341polr1a9672.676ENSPPRG00000006702POLR1A6572.676Panthera_pardus
ENSSPAG00000016341polr1a9671.300ENSPTIG00000018783POLR1A6571.300Panthera_tigris_altaica
ENSSPAG00000016341polr1a9471.769ENSPTRG00000012147POLR1A6371.769Pan_troglodytes
ENSSPAG00000016341polr1a9471.769ENSPANG00000025908POLR1A6371.995Papio_anubis
ENSSPAG00000016341polr1a9379.171ENSPKIG00000005468polr1a6379.171Paramormyrops_kingsleyae
ENSSPAG00000016341polr1a9678.731ENSPMGG00000009718polr1a9578.731Periophthalmus_magnuspinnatus
ENSSPAG00000016341polr1a9471.914ENSPEMG00000022224Polr1a6371.914Peromyscus_maniculatus_bairdii
ENSSPAG00000016341polr1a9969.740ENSPCIG00000004222POLR1A6969.828Phascolarctos_cinereus
ENSSPAG00000016341polr1a9684.869ENSPFOG00000005025polr1a6684.869Poecilia_formosa
ENSSPAG00000016341polr1a9485.000ENSPLAG00000021389polr1a6485.000Poecilia_latipinna
ENSSPAG00000016341polr1a9976.644ENSPMEG00000006463polr1a6977.155Poecilia_mexicana
ENSSPAG00000016341polr1a9485.114ENSPREG00000002389polr1a6485.114Poecilia_reticulata
ENSSPAG00000016341polr1a9471.995ENSPPYG00000012217POLR1A6371.995Pongo_abelii
ENSSPAG00000016341polr1a9064.114ENSPCAG00000011582POLR1A6065.068Procavia_capensis
ENSSPAG00000016341polr1a9471.655ENSPCOG00000026987POLR1A6371.655Propithecus_coquereli
ENSSPAG00000016341polr1a9167.722ENSPVAG00000012674POLR1A6168.758Pteropus_vampyrus
ENSSPAG00000016341polr1a9688.876ENSPNYG00000000026polr1a6688.876Pundamilia_nyererei
ENSSPAG00000016341polr1a9576.957ENSPNAG00000019223polr1a6576.957Pygocentrus_nattereri
ENSSPAG00000016341polr1a9472.336ENSRNOG00000009545Polr1a6472.336Rattus_norvegicus
ENSSPAG00000016341polr1a9471.769ENSRBIG00000028335POLR1A6371.769Rhinopithecus_bieti
ENSSPAG00000016341polr1a9471.769ENSRROG00000031473POLR1A6371.769Rhinopithecus_roxellana
ENSSPAG00000016341polr1a9042.446YOR341WRPA1905842.446Saccharomyces_cerevisiae
ENSSPAG00000016341polr1a9471.088ENSSBOG00000030262POLR1A6371.088Saimiri_boliviensis_boliviensis
ENSSPAG00000016341polr1a9662.641ENSSHAG00000014739POLR1A5968.750Sarcophilus_harrisii
ENSSPAG00000016341polr1a9379.002ENSSFOG00015019716polr1a6379.002Scleropages_formosus
ENSSPAG00000016341polr1a10081.802ENSSMAG00000014342polr1a6882.877Scophthalmus_maximus
ENSSPAG00000016341polr1a9589.217ENSSDUG00000014631polr1a6489.217Seriola_dumerili
ENSSPAG00000016341polr1a9986.613ENSSLDG00000024095polr1a7086.613Seriola_lalandi_dorsalis
ENSSPAG00000016341polr1a7295.122ENSSARG00000003136-5195.122Sorex_araneus
ENSSPAG00000016341polr1a9570.146ENSSPUG00000004215POLR1A6771.709Sphenodon_punctatus
ENSSPAG00000016341polr1a9471.769ENSSSCG00000008226POLR1A7671.769Sus_scrofa
ENSSPAG00000016341polr1a9271.251ENSTGUG00000010704POLR1A6371.251Taeniopygia_guttata
ENSSPAG00000016341polr1a9679.473ENSTRUG00000002210polr1a9676.406Takifugu_rubripes
ENSSPAG00000016341polr1a9577.489ENSTNIG00000010116polr1a6477.489Tetraodon_nigroviridis
ENSSPAG00000016341polr1a9171.378ENSTTRG00000008597POLR1A6371.378Tursiops_truncatus
ENSSPAG00000016341polr1a5770.859ENSUAMG00000012158-5271.207Ursus_americanus
ENSSPAG00000016341polr1a9552.852ENSUAMG00000000099-9852.852Ursus_americanus
ENSSPAG00000016341polr1a9471.655ENSUMAG00000006700POLR1A9965.294Ursus_maritimus
ENSSPAG00000016341polr1a9472.336ENSVVUG00000001245POLR1A6372.336Vulpes_vulpes
ENSSPAG00000016341polr1a9567.713ENSXETG00000001952polr1a7766.926Xenopus_tropicalis
ENSSPAG00000016341polr1a8574.968ENSXCOG00000013384polr1a9976.368Xiphophorus_couchianus
ENSSPAG00000016341polr1a9484.598ENSXMAG00000004032polr1a6384.713Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us