EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000016620 (Gene tree)
Gene ID: 103360160
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 25980 bases
Position: chrKK580489.1:505685-531664
Accession: 103360160
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000022015	Fox-1_C	PF12414.8	1.1e-34	1	1
ENSSPAP00000022033	Fox-1_C	PF12414.8	1.6e-18	1	2
ENSSPAP00000022033	Fox-1_C	PF12414.8	1.6e-18	2	2
ENSSPAP00000022033	RRM_1	PF00076.22	9.6e-18	1	1
ENSSPAP00000022015	RRM_1	PF00076.22	1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000022365	-	1146	XM_008285833	ENSSPAP00000022015	381 (aa)	XP_008284055	UPI000494FF1D
ENSSPAT00000022383	-	1095	-	ENSSPAP00000022033	364 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000016620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000016620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000016620	rbfox1l	90	49.742	ENSSPAG00000009723	rbfox1	85	55.700
ENSSPAG00000016620	rbfox1l	97	48.541	ENSSPAG00000017571	rbfox3b	76	55.903
ENSSPAG00000016620	rbfox1l	63	60.985	ENSSPAG00000016272	-	56	64.015
ENSSPAG00000016620	rbfox1l	63	64.615	ENSSPAG00000013681	rbfox2	56	64.093
ENSSPAG00000016620	rbfox1l	77	52.862	ENSSPAG00000004898	-	56	68.342

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000016620	rbfox1l	97	95.664	ENSAPOG00000016304	rbfox1l	98	95.664	Acanthochromis_polyacanthus
ENSSPAG00000016620	rbfox1l	100	84.511	ENSACIG00000006441	rbfox1l	100	83.696	Amphilophus_citrinellus
ENSSPAG00000016620	rbfox1l	87	96.226	ENSAOCG00000020938	rbfox1l	99	96.226	Amphiprion_ocellaris
ENSSPAG00000016620	rbfox1l	100	96.063	ENSAPEG00000008232	rbfox1l	100	96.063	Amphiprion_percula
ENSSPAG00000016620	rbfox1l	100	88.127	ENSATEG00000022649	rbfox1l	100	87.335	Anabas_testudineus
ENSSPAG00000016620	rbfox1l	65	72.727	ENSACAG00000011931	-	89	73.790	Anolis_carolinensis
ENSSPAG00000016620	rbfox1l	100	88.773	ENSACLG00000021394	rbfox1l	100	90.339	Astatotilapia_calliptera
ENSSPAG00000016620	rbfox1l	100	84.197	ENSAMXG00000010470	rbfox1l	100	84.197	Astyanax_mexicanus
ENSSPAG00000016620	rbfox1l	100	57.326	ENSCPBG00000010944	-	100	57.990	Chrysemys_picta_bellii
ENSSPAG00000016620	rbfox1l	100	88.281	ENSCSEG00000018898	rbfox1l	100	87.500	Cynoglossus_semilaevis
ENSSPAG00000016620	rbfox1l	100	90.551	ENSCVAG00000007986	rbfox1l	100	90.551	Cyprinodon_variegatus
ENSSPAG00000016620	rbfox1l	100	84.456	ENSDARG00000021184	rbfox1l	100	82.642	Danio_rerio
ENSSPAG00000016620	rbfox1l	100	80.916	ENSELUG00000015077	rbfox1l	100	83.715	Esox_lucius
ENSSPAG00000016620	rbfox1l	96	84.674	ENSFHEG00000016557	rbfox1l	95	95.122	Fundulus_heteroclitus
ENSSPAG00000016620	rbfox1l	100	83.551	ENSGMOG00000005040	rbfox1l	100	82.768	Gadus_morhua
ENSSPAG00000016620	rbfox1l	92	88.983	ENSGAFG00000013211	rbfox1l	97	88.983	Gambusia_affinis
ENSSPAG00000016620	rbfox1l	100	89.034	ENSGACG00000010757	rbfox1l	100	89.556	Gasterosteus_aculeatus
ENSSPAG00000016620	rbfox1l	66	70.079	ENSGAGG00000012440	-	84	73.469	Gopherus_agassizii
ENSSPAG00000016620	rbfox1l	100	88.773	ENSHBUG00000013406	rbfox1l	100	90.339	Haplochromis_burtoni
ENSSPAG00000016620	rbfox1l	100	84.635	ENSHCOG00000020771	rbfox1l	100	85.677	Hippocampus_comes
ENSSPAG00000016620	rbfox1l	99	80.315	ENSIPUG00000000065	rbfox1l	99	80.672	Ictalurus_punctatus
ENSSPAG00000016620	rbfox1l	100	89.351	ENSKMAG00000005146	rbfox1l	100	88.831	Kryptolebias_marmoratus
ENSSPAG00000016620	rbfox1l	100	91.384	ENSLBEG00000017089	rbfox1l	100	91.906	Labrus_bergylta
ENSSPAG00000016620	rbfox1l	100	90.601	ENSMAMG00000019480	rbfox1l	100	90.601	Mastacembelus_armatus
ENSSPAG00000016620	rbfox1l	100	88.773	ENSMZEG00005016374	rbfox1l	100	90.339	Maylandia_zebra
ENSSPAG00000016620	rbfox1l	100	89.817	ENSMMOG00000016530	rbfox1l	100	88.773	Mola_mola
ENSSPAG00000016620	rbfox1l	100	85.640	ENSMALG00000009384	rbfox1l	100	86.162	Monopterus_albus
ENSSPAG00000016620	rbfox1l	100	90.339	ENSNBRG00000003346	rbfox1l	100	89.556	Neolamprologus_brichardi
ENSSPAG00000016620	rbfox1l	100	89.295	ENSONIG00000012754	rbfox1l	100	90.862	Oreochromis_niloticus
ENSSPAG00000016620	rbfox1l	100	90.289	ENSORLG00000011269	rbfox1l	100	90.289	Oryzias_latipes
ENSSPAG00000016620	rbfox1l	100	91.076	ENSORLG00020000162	rbfox1l	100	91.076	Oryzias_latipes_hni
ENSSPAG00000016620	rbfox1l	100	91.076	ENSORLG00015013464	rbfox1l	100	91.076	Oryzias_latipes_hsok
ENSSPAG00000016620	rbfox1l	100	92.388	ENSOMEG00000010584	rbfox1l	100	92.388	Oryzias_melastigma
ENSSPAG00000016620	rbfox1l	100	85.938	ENSPKIG00000012029	rbfox1l	100	85.417	Paramormyrops_kingsleyae
ENSSPAG00000016620	rbfox1l	100	84.031	ENSPMGG00000012082	rbfox1l	100	81.937	Periophthalmus_magnuspinnatus
ENSSPAG00000016620	rbfox1l	100	90.339	ENSPFOG00000009338	rbfox1l	100	90.078	Poecilia_formosa
ENSSPAG00000016620	rbfox1l	85	81.346	ENSPLAG00000012816	rbfox1l	92	80.719	Poecilia_latipinna
ENSSPAG00000016620	rbfox1l	100	90.164	ENSPMEG00000017597	rbfox1l	100	89.891	Poecilia_mexicana
ENSSPAG00000016620	rbfox1l	100	90.164	ENSPREG00000007940	rbfox1l	100	89.891	Poecilia_reticulata
ENSSPAG00000016620	rbfox1l	100	88.512	ENSPNYG00000002098	rbfox1l	100	90.078	Pundamilia_nyererei
ENSSPAG00000016620	rbfox1l	100	85.788	ENSPNAG00000001620	rbfox1l	100	83.721	Pygocentrus_nattereri
ENSSPAG00000016620	rbfox1l	100	81.039	ENSSFOG00015000675	rbfox1l	100	81.558	Scleropages_formosus
ENSSPAG00000016620	rbfox1l	100	88.773	ENSSMAG00000013090	rbfox1l	100	89.295	Scophthalmus_maximus
ENSSPAG00000016620	rbfox1l	100	87.147	ENSSDUG00000008705	rbfox1l	100	88.432	Seriola_dumerili
ENSSPAG00000016620	rbfox1l	100	89.948	ENSSLDG00000022256	rbfox1l	100	88.918	Seriola_lalandi_dorsalis
ENSSPAG00000016620	rbfox1l	96	85.676	ENSTRUG00000015905	rbfox1l	100	84.865	Takifugu_rubripes
ENSSPAG00000016620	rbfox1l	65	82.528	ENSTNIG00000008088	rbfox1l	97	84.733	Tetraodon_nigroviridis
ENSSPAG00000016620	rbfox1l	100	90.339	ENSXMAG00000023471	rbfox1l	100	90.078	Xiphophorus_maculatus