EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000016969 (Gene tree)
Gene ID: 103358028
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: vigilin-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 19225 bases
Position: chrKK580358.1:346451-365675
Accession: 103358028
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000022526	KH_1	PF00013.29	4.9e-189	1	14
ENSSPAP00000022526	KH_1	PF00013.29	4.9e-189	2	14
ENSSPAP00000022526	KH_1	PF00013.29	4.9e-189	3	14
ENSSPAP00000022526	KH_1	PF00013.29	4.9e-189	4	14
ENSSPAP00000022526	KH_1	PF00013.29	4.9e-189	5	14
ENSSPAP00000022526	KH_1	PF00013.29	4.9e-189	6	14
ENSSPAP00000022526	KH_1	PF00013.29	4.9e-189	7	14
ENSSPAP00000022526	KH_1	PF00013.29	4.9e-189	8	14
ENSSPAP00000022526	KH_1	PF00013.29	4.9e-189	9	14
ENSSPAP00000022526	KH_1	PF00013.29	4.9e-189	10	14
ENSSPAP00000022526	KH_1	PF00013.29	4.9e-189	11	14
ENSSPAP00000022526	KH_1	PF00013.29	4.9e-189	12	14
ENSSPAP00000022526	KH_1	PF00013.29	4.9e-189	13	14
ENSSPAP00000022526	KH_1	PF00013.29	4.9e-189	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000022886	-	5472	XM_008282826	ENSSPAP00000022526	1268 (aa)	XP_008281048	UPI000495470B

Gene Model

Click here to download ENSSPAG00000016969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000016969's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000016969	hdlbpb	100	71.507	ENSSPAG00000009145	hdlbpa	100	71.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000016969	hdlbpb	100	98.896	ENSAPOG00000006904	hdlbpb	100	98.896	Acanthochromis_polyacanthus
ENSSPAG00000016969	hdlbpb	100	92.386	ENSACIG00000016154	hdlbpb	100	92.308	Amphilophus_citrinellus
ENSSPAG00000016969	hdlbpb	100	99.527	ENSAOCG00000004083	hdlbpb	100	99.527	Amphiprion_ocellaris
ENSSPAG00000016969	hdlbpb	100	99.448	ENSAPEG00000012270	hdlbpb	100	99.448	Amphiprion_percula
ENSSPAG00000016969	hdlbpb	100	97.161	ENSATEG00000019877	hdlbpb	100	97.161	Anabas_testudineus
ENSSPAG00000016969	hdlbpb	100	82.413	ENSACAG00000003606	-	100	82.413	Anolis_carolinensis
ENSSPAG00000016969	hdlbpb	100	97.792	ENSACLG00000006618	hdlbpb	100	97.792	Astatotilapia_calliptera
ENSSPAG00000016969	hdlbpb	100	78.268	ENSAMXG00000019946	hdlbpb	100	78.268	Astyanax_mexicanus
ENSSPAG00000016969	hdlbpb	100	96.609	ENSCSEG00000000955	hdlbpb	100	96.609	Cynoglossus_semilaevis
ENSSPAG00000016969	hdlbpb	100	96.215	ENSCVAG00000005345	hdlbpb	100	96.215	Cyprinodon_variegatus
ENSSPAG00000016969	hdlbpb	99	85.714	ENSDARG00000061864	hdlbpb	99	85.714	Danio_rerio
ENSSPAG00000016969	hdlbpb	92	70.085	ENSEBUG00000005304	hdlbpb	96	69.915	Eptatretus_burgeri
ENSSPAG00000016969	hdlbpb	100	78.650	ENSELUG00000019925	hdlbpb	100	78.807	Esox_lucius
ENSSPAG00000016969	hdlbpb	87	34.768	ENSFHEG00000001701	hdlbpb	100	91.325	Fundulus_heteroclitus
ENSSPAG00000016969	hdlbpb	95	88.310	ENSGMOG00000004522	hdlbpb	78	88.310	Gadus_morhua
ENSSPAG00000016969	hdlbpb	100	96.215	ENSGAFG00000005278	hdlbpb	100	96.215	Gambusia_affinis
ENSSPAG00000016969	hdlbpb	99	93.528	ENSGACG00000019361	hdlbpb	100	93.765	Gasterosteus_aculeatus
ENSSPAG00000016969	hdlbpb	100	97.634	ENSHBUG00000018434	hdlbpb	100	97.634	Haplochromis_burtoni
ENSSPAG00000016969	hdlbpb	100	85.433	ENSIPUG00000003291	HDLBP	100	85.789	Ictalurus_punctatus
ENSSPAG00000016969	hdlbpb	100	97.397	ENSKMAG00000016562	hdlbpb	100	97.397	Kryptolebias_marmoratus
ENSSPAG00000016969	hdlbpb	100	97.634	ENSLBEG00000027855	hdlbpb	100	97.634	Labrus_bergylta
ENSSPAG00000016969	hdlbpb	100	85.075	ENSLACG00000007661	hdlbpb	90	85.075	Latimeria_chalumnae
ENSSPAG00000016969	hdlbpb	100	83.373	ENSLOCG00000013909	hdlbpb	100	83.373	Lepisosteus_oculatus
ENSSPAG00000016969	hdlbpb	100	97.950	ENSMAMG00000003035	hdlbpb	100	97.950	Mastacembelus_armatus
ENSSPAG00000016969	hdlbpb	100	97.792	ENSMZEG00005021465	hdlbpb	100	97.792	Maylandia_zebra
ENSSPAG00000016969	hdlbpb	100	96.609	ENSMMOG00000012525	hdlbpb	100	96.609	Mola_mola
ENSSPAG00000016969	hdlbpb	100	95.741	ENSMALG00000008938	hdlbpb	100	95.741	Monopterus_albus
ENSSPAG00000016969	hdlbpb	100	97.871	ENSNBRG00000002236	hdlbpb	100	97.871	Neolamprologus_brichardi
ENSSPAG00000016969	hdlbpb	100	97.555	ENSONIG00000009211	hdlbpb	100	97.555	Oreochromis_niloticus
ENSSPAG00000016969	hdlbpb	100	95.584	ENSORLG00000006581	hdlbpb	100	95.584	Oryzias_latipes
ENSSPAG00000016969	hdlbpb	100	95.741	ENSORLG00020010012	hdlbpb	100	95.741	Oryzias_latipes_hni
ENSSPAG00000016969	hdlbpb	100	95.978	ENSORLG00015006863	hdlbpb	100	95.978	Oryzias_latipes_hsok
ENSSPAG00000016969	hdlbpb	100	95.978	ENSOMEG00000011131	hdlbpb	100	95.978	Oryzias_melastigma
ENSSPAG00000016969	hdlbpb	100	89.117	ENSPKIG00000005966	hdlbpb	100	89.117	Paramormyrops_kingsleyae
ENSSPAG00000016969	hdlbpb	86	92.778	ENSPMGG00000019853	hdlbpb	99	92.778	Periophthalmus_magnuspinnatus
ENSSPAG00000016969	hdlbpb	92	64.901	ENSPMAG00000000249	-	99	64.744	Petromyzon_marinus
ENSSPAG00000016969	hdlbpb	94	74.781	ENSPMAG00000002131	hdlbpb	100	74.781	Petromyzon_marinus
ENSSPAG00000016969	hdlbpb	100	95.632	ENSPFOG00000008755	hdlbpb	100	95.632	Poecilia_formosa
ENSSPAG00000016969	hdlbpb	100	96.609	ENSPLAG00000007055	hdlbpb	100	96.609	Poecilia_latipinna
ENSSPAG00000016969	hdlbpb	100	96.530	ENSPMEG00000001952	hdlbpb	100	96.530	Poecilia_mexicana
ENSSPAG00000016969	hdlbpb	100	96.688	ENSPREG00000012848	hdlbpb	100	96.688	Poecilia_reticulata
ENSSPAG00000016969	hdlbpb	100	97.634	ENSPNYG00000022467	hdlbpb	100	97.634	Pundamilia_nyererei
ENSSPAG00000016969	hdlbpb	100	87.934	ENSPNAG00000011104	hdlbpb	100	87.934	Pygocentrus_nattereri
ENSSPAG00000016969	hdlbpb	100	88.249	ENSSFOG00015023199	hdlbpb	100	88.249	Scleropages_formosus
ENSSPAG00000016969	hdlbpb	100	97.397	ENSSMAG00000008790	hdlbpb	100	97.397	Scophthalmus_maximus
ENSSPAG00000016969	hdlbpb	100	98.817	ENSSDUG00000020694	hdlbpb	100	98.817	Seriola_dumerili
ENSSPAG00000016969	hdlbpb	100	98.265	ENSSLDG00000020807	hdlbpb	100	98.265	Seriola_lalandi_dorsalis
ENSSPAG00000016969	hdlbpb	100	83.123	ENSSPUG00000018688	-	100	83.123	Sphenodon_punctatus
ENSSPAG00000016969	hdlbpb	98	93.349	ENSTRUG00000012888	hdlbpb	99	93.349	Takifugu_rubripes
ENSSPAG00000016969	hdlbpb	99	94.832	ENSTNIG00000002555	hdlbpb	100	94.832	Tetraodon_nigroviridis
ENSSPAG00000016969	hdlbpb	100	84.349	ENSXCOG00000001797	hdlbpb	100	84.349	Xiphophorus_couchianus
ENSSPAG00000016969	hdlbpb	100	95.820	ENSXMAG00000015633	hdlbpb	100	95.820	Xiphophorus_maculatus