EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000017068 (Gene tree)
Gene ID: 103367533
Gene Symbol: vars
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 12021 bases
Position: chrKK581132.1:17489-29509
Accession: 103367533
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000022733	tRNA-synt_1g	PF09334.11	4.1e-12	1	1
ENSSPAP00000022668	tRNA-synt_1g	PF09334.11	4.7e-12	1	1
ENSSPAP00000022668	Anticodon_1	PF08264.13	1e-34	1	1
ENSSPAP00000022733	Anticodon_1	PF08264.13	2.9e-29	1	1
ENSSPAP00000022668	tRNA-synt_1	PF00133.22	1.3e-206	1	1
ENSSPAP00000022733	tRNA-synt_1	PF00133.22	3.3e-205	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000023098	-	3675	-	ENSSPAP00000022733	1224 (aa)	-	-
ENSSPAT00000023033	-	3981	XM_008295587	ENSSPAP00000022668	1272 (aa)	XP_008293809	UPI000497FC5A

Gene Model

Click here to download ENSSPAG00000017068's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000017068's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000017068	vars	79	47.734	ENSSPAG00000004654	vars2	98	45.763

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000017068	vars	100	64.798	ENSG00000204394	VARS	99	72.699	Homo_sapiens
ENSSPAG00000017068	vars	98	91.474	ENSAPOG00000020691	vars	99	91.474	Acanthochromis_polyacanthus
ENSSPAG00000017068	vars	98	91.474	ENSAPOG00000020921	vars	99	91.474	Acanthochromis_polyacanthus
ENSSPAG00000017068	vars	100	64.981	ENSAMEG00000006417	VARS	100	64.907	Ailuropoda_melanoleuca
ENSSPAG00000017068	vars	100	90.431	ENSACIG00000013752	vars	100	90.431	Amphilophus_citrinellus
ENSSPAG00000017068	vars	100	94.969	ENSAOCG00000002447	vars	99	94.969	Amphiprion_ocellaris
ENSSPAG00000017068	vars	100	94.969	ENSAPEG00000010638	vars	99	94.969	Amphiprion_percula
ENSSPAG00000017068	vars	100	90.276	ENSATEG00000020219	vars	100	90.276	Anabas_testudineus
ENSSPAG00000017068	vars	90	71.615	ENSACAG00000029133	-	99	71.615	Anolis_carolinensis
ENSSPAG00000017068	vars	100	64.564	ENSANAG00000015453	VARS	100	64.715	Aotus_nancymaae
ENSSPAG00000017068	vars	100	91.458	ENSACLG00000025699	vars	97	91.223	Astatotilapia_calliptera
ENSSPAG00000017068	vars	96	81.429	ENSAMXG00000017716	vars	96	81.444	Astyanax_mexicanus
ENSSPAG00000017068	vars	100	64.875	ENSBTAG00000005631	VARS	100	64.929	Bos_taurus
ENSSPAG00000017068	vars	100	64.564	ENSCJAG00000002604	VARS	100	64.569	Callithrix_jacchus
ENSSPAG00000017068	vars	100	64.720	ENSCAFG00000000636	VARS	100	64.646	Canis_familiaris
ENSSPAG00000017068	vars	94	65.947	ENSCAFG00020020790	VARS	96	65.866	Canis_lupus_dingo
ENSSPAG00000017068	vars	100	64.981	ENSCHIG00000011008	VARS	100	65.062	Capra_hircus
ENSSPAG00000017068	vars	100	64.486	ENSTSYG00000001567	VARS	100	64.613	Carlito_syrichta
ENSSPAG00000017068	vars	91	67.848	ENSCAPG00000013736	VARS	98	67.530	Cavia_aperea
ENSSPAG00000017068	vars	100	64.386	ENSCPOG00000000870	VARS	100	63.947	Cavia_porcellus
ENSSPAG00000017068	vars	100	64.724	ENSCCAG00000035656	VARS	100	64.541	Cebus_capucinus
ENSSPAG00000017068	vars	100	65.265	ENSCATG00000022394	VARS	100	65.166	Cercocebus_atys
ENSSPAG00000017068	vars	90	65.590	ENSCLAG00000009470	VARS	93	64.979	Chinchilla_lanigera
ENSSPAG00000017068	vars	100	65.109	ENSCSAG00000008784	VARS	100	64.929	Chlorocebus_sabaeus
ENSSPAG00000017068	vars	79	74.897	ENSCPBG00000007943	VARS	96	74.949	Chrysemys_picta_bellii
ENSSPAG00000017068	vars	100	65.265	ENSCANG00000033570	VARS	100	65.035	Colobus_angolensis_palliatus
ENSSPAG00000017068	vars	100	65.031	ENSCGRG00001005686	Vars	100	65.268	Cricetulus_griseus_chok1gshd
ENSSPAG00000017068	vars	93	63.262	ENSCGRG00000013352	Vars	78	63.517	Cricetulus_griseus_crigri
ENSSPAG00000017068	vars	100	85.057	ENSCSEG00000019652	vars	100	85.263	Cynoglossus_semilaevis
ENSSPAG00000017068	vars	100	90.674	ENSCVAG00000022398	vars	100	90.674	Cyprinodon_variegatus
ENSSPAG00000017068	vars	100	84.248	ENSDARG00000044575	vars	100	84.248	Danio_rerio
ENSSPAG00000017068	vars	86	68.317	ENSDORG00000016433	Vars	93	70.992	Dipodomys_ordii
ENSSPAG00000017068	vars	68	74.864	ENSETEG00000003824	VARS	77	74.864	Echinops_telfairi
ENSSPAG00000017068	vars	57	65.937	ENSEBUG00000004637	vars	100	65.937	Eptatretus_burgeri
ENSSPAG00000017068	vars	52	72.522	ENSEBUG00000007086	vars	82	73.230	Eptatretus_burgeri
ENSSPAG00000017068	vars	100	65.109	ENSEASG00005015673	VARS	100	65.272	Equus_asinus_asinus
ENSSPAG00000017068	vars	100	64.981	ENSECAG00000014620	VARS	100	65.300	Equus_caballus
ENSSPAG00000017068	vars	72	71.679	ENSEEUG00000004116	VARS	73	71.930	Erinaceus_europaeus
ENSSPAG00000017068	vars	100	84.813	ENSELUG00000006550	vars	97	85.012	Esox_lucius
ENSSPAG00000017068	vars	100	65.109	ENSFCAG00000004510	VARS	100	65.035	Felis_catus
ENSSPAG00000017068	vars	83	70.688	ENSFDAG00000011401	VARS	100	69.813	Fukomys_damarensis
ENSSPAG00000017068	vars	100	89.028	ENSFHEG00000010672	vars	100	89.028	Fundulus_heteroclitus
ENSSPAG00000017068	vars	100	81.839	ENSGMOG00000014908	vars	100	82.151	Gadus_morhua
ENSSPAG00000017068	vars	100	90.267	ENSGAFG00000021630	vars	100	90.031	Gambusia_affinis
ENSSPAG00000017068	vars	93	91.436	ENSGACG00000009601	vars	100	87.471	Gasterosteus_aculeatus
ENSSPAG00000017068	vars	50	60.031	ENSGAGG00000006508	-	91	61.438	Gopherus_agassizii
ENSSPAG00000017068	vars	100	65.031	ENSGGOG00000011364	VARS	100	64.880	Gorilla_gorilla
ENSSPAG00000017068	vars	100	91.536	ENSHBUG00000017151	vars	97	91.301	Haplochromis_burtoni
ENSSPAG00000017068	vars	100	64.614	ENSHGLG00000011646	VARS	100	64.536	Heterocephalus_glaber_female
ENSSPAG00000017068	vars	93	61.635	ENSHGLG00100018062	VARS	99	62.269	Heterocephalus_glaber_male
ENSSPAG00000017068	vars	99	84.169	ENSHCOG00000012198	vars	99	84.248	Hippocampus_comes
ENSSPAG00000017068	vars	100	82.799	ENSIPUG00000005218	vars	100	83.464	Ictalurus_punctatus
ENSSPAG00000017068	vars	100	65.265	ENSSTOG00000013112	VARS	100	65.190	Ictidomys_tridecemlineatus
ENSSPAG00000017068	vars	100	52.669	ENSJJAG00000015343	-	100	52.669	Jaculus_jaculus
ENSSPAG00000017068	vars	100	64.509	ENSJJAG00000019749	-	100	64.478	Jaculus_jaculus
ENSSPAG00000017068	vars	100	87.814	ENSKMAG00000009455	vars	100	87.814	Kryptolebias_marmoratus
ENSSPAG00000017068	vars	100	88.880	ENSLBEG00000010341	vars	100	88.880	Labrus_bergylta
ENSSPAG00000017068	vars	94	66.612	ENSLACG00000015232	VARS	99	66.831	Latimeria_chalumnae
ENSSPAG00000017068	vars	100	75.491	ENSLOCG00000004240	vars	100	75.255	Lepisosteus_oculatus
ENSSPAG00000017068	vars	100	64.614	ENSLAFG00000023090	VARS	100	64.614	Loxodonta_africana
ENSSPAG00000017068	vars	100	65.109	ENSMFAG00000001032	VARS	100	65.008	Macaca_fascicularis
ENSSPAG00000017068	vars	100	65.109	ENSMMUG00000006828	VARS	100	65.008	Macaca_mulatta
ENSSPAG00000017068	vars	100	65.109	ENSMNEG00000042072	VARS	100	65.008	Macaca_nemestrina
ENSSPAG00000017068	vars	100	65.187	ENSMLEG00000039307	VARS	100	65.087	Mandrillus_leucophaeus
ENSSPAG00000017068	vars	100	91.667	ENSMAMG00000003949	vars	100	91.352	Mastacembelus_armatus
ENSSPAG00000017068	vars	100	91.458	ENSMZEG00005018327	vars	97	91.301	Maylandia_zebra
ENSSPAG00000017068	vars	100	64.564	ENSMAUG00000006715	Vars	100	64.880	Mesocricetus_auratus
ENSSPAG00000017068	vars	100	64.953	ENSMICG00000003548	VARS	100	64.646	Microcebus_murinus
ENSSPAG00000017068	vars	100	63.593	ENSMOCG00000015404	Vars	100	63.831	Microtus_ochrogaster
ENSSPAG00000017068	vars	100	87.343	ENSMMOG00000015801	vars	100	87.040	Mola_mola
ENSSPAG00000017068	vars	100	65.187	ENSMODG00000015204	-	100	65.035	Monodelphis_domestica
ENSSPAG00000017068	vars	99	90.674	ENSMALG00000022532	vars	99	90.596	Monopterus_albus
ENSSPAG00000017068	vars	100	65.160	MGP_CAROLIEiJ_G0021491	Vars	100	65.238	Mus_caroli
ENSSPAG00000017068	vars	100	64.926	ENSMUSG00000007029	Vars	100	64.848	Mus_musculus
ENSSPAG00000017068	vars	100	64.848	MGP_PahariEiJ_G0020486	Vars	100	64.926	Mus_pahari
ENSSPAG00000017068	vars	100	65.004	MGP_SPRETEiJ_G0022396	Vars	100	64.926	Mus_spretus
ENSSPAG00000017068	vars	100	64.875	ENSMPUG00000010821	VARS	100	64.802	Mustela_putorius_furo
ENSSPAG00000017068	vars	78	68.263	ENSMLUG00000013126	VARS	100	68.060	Myotis_lucifugus
ENSSPAG00000017068	vars	100	65.004	ENSNGAG00000012151	Vars	100	65.008	Nannospalax_galili
ENSSPAG00000017068	vars	100	91.379	ENSNBRG00000020520	vars	100	91.144	Neolamprologus_brichardi
ENSSPAG00000017068	vars	100	64.875	ENSNLEG00000006351	VARS	100	64.802	Nomascus_leucogenys
ENSSPAG00000017068	vars	95	72.336	ENSMEUG00000011378	VARS	95	72.261	Notamacropus_eugenii
ENSSPAG00000017068	vars	100	65.343	ENSOPRG00000003607	VARS	100	65.346	Ochotona_princeps
ENSSPAG00000017068	vars	100	64.069	ENSODEG00000017681	VARS	100	63.946	Octodon_degus
ENSSPAG00000017068	vars	100	90.930	ENSONIG00000013064	vars	100	92.509	Oreochromis_niloticus
ENSSPAG00000017068	vars	77	68.757	ENSOANG00000005400	VARS	98	68.047	Ornithorhynchus_anatinus
ENSSPAG00000017068	vars	100	63.523	ENSOCUG00000022463	VARS	100	63.125	Oryctolagus_cuniculus
ENSSPAG00000017068	vars	100	88.863	ENSORLG00000013063	vars	100	89.019	Oryzias_latipes
ENSSPAG00000017068	vars	100	89.515	ENSORLG00020003504	vars	100	89.437	Oryzias_latipes_hni
ENSSPAG00000017068	vars	100	89.898	ENSORLG00015009001	vars	100	89.898	Oryzias_latipes_hsok
ENSSPAG00000017068	vars	100	90.055	ENSOMEG00000015016	vars	100	90.055	Oryzias_melastigma
ENSSPAG00000017068	vars	100	64.330	ENSOGAG00000007515	VARS	100	64.376	Otolemur_garnettii
ENSSPAG00000017068	vars	50	64.375	ENSOARG00000004625	-	91	64.075	Ovis_aries
ENSSPAG00000017068	vars	100	64.798	ENSPPAG00000034012	VARS	100	64.850	Pan_paniscus
ENSSPAG00000017068	vars	100	65.109	ENSPPRG00000014855	VARS	100	65.035	Panthera_pardus
ENSSPAG00000017068	vars	85	69.393	ENSPTIG00000010462	VARS	93	69.161	Panthera_tigris_altaica
ENSSPAG00000017068	vars	100	64.720	ENSPTRG00000017985	VARS	100	64.771	Pan_troglodytes
ENSSPAG00000017068	vars	100	63.622	ENSPANG00000014565	VARS	100	63.475	Papio_anubis
ENSSPAG00000017068	vars	100	81.620	ENSPKIG00000016304	vars	100	81.620	Paramormyrops_kingsleyae
ENSSPAG00000017068	vars	100	84.748	ENSPMGG00000023909	vars	100	84.748	Periophthalmus_magnuspinnatus
ENSSPAG00000017068	vars	100	64.486	ENSPEMG00000006639	Vars	100	64.724	Peromyscus_maniculatus_bairdii
ENSSPAG00000017068	vars	100	64.875	ENSPCIG00000018553	VARS	100	64.880	Phascolarctos_cinereus
ENSSPAG00000017068	vars	100	89.874	ENSPFOG00000015690	vars	100	89.717	Poecilia_formosa
ENSSPAG00000017068	vars	100	89.717	ENSPLAG00000009590	vars	100	89.560	Poecilia_latipinna
ENSSPAG00000017068	vars	100	89.796	ENSPMEG00000004708	vars	100	89.639	Poecilia_mexicana
ENSSPAG00000017068	vars	100	85.990	ENSPREG00000013264	vars	99	92.909	Poecilia_reticulata
ENSSPAG00000017068	vars	100	63.396	ENSPPYG00000016460	VARS	100	63.672	Pongo_abelii
ENSSPAG00000017068	vars	85	65.295	ENSPCAG00000013565	VARS	86	65.295	Procavia_capensis
ENSSPAG00000017068	vars	100	64.591	ENSPCOG00000010942	VARS	100	64.957	Propithecus_coquereli
ENSSPAG00000017068	vars	100	62.597	ENSPVAG00000012403	VARS	100	62.626	Pteropus_vampyrus
ENSSPAG00000017068	vars	100	91.614	ENSPNYG00000022511	vars	100	91.379	Pundamilia_nyererei
ENSSPAG00000017068	vars	100	83.972	ENSPNAG00000020962	vars	100	84.050	Pygocentrus_nattereri
ENSSPAG00000017068	vars	100	64.875	ENSRNOG00000000867	Vars	100	64.802	Rattus_norvegicus
ENSSPAG00000017068	vars	100	65.187	ENSRBIG00000041669	VARS	100	65.008	Rhinopithecus_bieti
ENSSPAG00000017068	vars	100	65.187	ENSRROG00000045490	VARS	100	65.008	Rhinopithecus_roxellana
ENSSPAG00000017068	vars	100	64.330	ENSSBOG00000035402	VARS	100	64.455	Saimiri_boliviensis_boliviensis
ENSSPAG00000017068	vars	100	63.812	ENSSHAG00000006937	VARS	100	64.049	Sarcophilus_harrisii
ENSSPAG00000017068	vars	100	80.421	ENSSFOG00015014272	vars	100	80.421	Scleropages_formosus
ENSSPAG00000017068	vars	100	90.368	ENSSMAG00000009596	vars	99	90.368	Scophthalmus_maximus
ENSSPAG00000017068	vars	100	92.796	ENSSDUG00000014177	vars	100	92.952	Seriola_dumerili
ENSSPAG00000017068	vars	100	92.247	ENSSLDG00000025316	vars	100	92.482	Seriola_lalandi_dorsalis
ENSSPAG00000017068	vars	100	64.280	ENSSSCG00000038950	VARS	100	64.483	Sus_scrofa
ENSSPAG00000017068	vars	81	84.608	ENSTRUG00000012307	vars	96	84.570	Takifugu_rubripes
ENSSPAG00000017068	vars	100	87.363	ENSTNIG00000008011	vars	100	87.127	Tetraodon_nigroviridis
ENSSPAG00000017068	vars	100	59.716	ENSTTRG00000014128	VARS	100	59.716	Tursiops_truncatus
ENSSPAG00000017068	vars	100	63.502	ENSUAMG00000010424	VARS	100	63.658	Ursus_americanus
ENSSPAG00000017068	vars	100	59.938	ENSUMAG00000013486	VARS	98	64.596	Ursus_maritimus
ENSSPAG00000017068	vars	100	64.889	ENSVVUG00000021323	VARS	100	64.916	Vulpes_vulpes
ENSSPAG00000017068	vars	100	64.953	ENSXETG00000024076	vars	100	64.903	Xenopus_tropicalis
ENSSPAG00000017068	vars	100	87.981	ENSXCOG00000019172	vars	100	87.981	Xiphophorus_couchianus
ENSSPAG00000017068	vars	100	90.110	ENSXMAG00000010927	vars	100	89.953	Xiphophorus_maculatus