EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000017069 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 55633 bases
Position: chrKK580491.1:115842-171474
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000022605	zf-C2H2	PF00096.26	2.3e-39	1	7
ENSSPAP00000022605	zf-C2H2	PF00096.26	2.3e-39	2	7
ENSSPAP00000022605	zf-C2H2	PF00096.26	2.3e-39	3	7
ENSSPAP00000022605	zf-C2H2	PF00096.26	2.3e-39	4	7
ENSSPAP00000022605	zf-C2H2	PF00096.26	2.3e-39	5	7
ENSSPAP00000022605	zf-C2H2	PF00096.26	2.3e-39	6	7
ENSSPAP00000022605	zf-C2H2	PF00096.26	2.3e-39	7	7
ENSSPAP00000022605	zf-met	PF12874.7	9.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000022968	-	3459	-	ENSSPAP00000022605	1152 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000017069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000017069's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000017069	-	51	31.606	ENSSPAG00000021928	-	90	31.088
ENSSPAG00000017069	-	51	30.000	ENSSPAG00000022865	-	97	32.353
ENSSPAG00000017069	-	56	32.524	ENSSPAG00000013118	-	84	32.381
ENSSPAG00000017069	-	50	30.086	ENSSPAG00000022868	-	98	30.612

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000017069	-	67	40.708	ENSONIG00000016416	-	98	40.966	Oreochromis_niloticus