EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000017093 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 38602 bases
Position: chrKK580491.1:133760-172361
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000022639	zf-C2H2	PF00096.26	1.4e-27	1	5
ENSSPAP00000022639	zf-C2H2	PF00096.26	1.4e-27	2	5
ENSSPAP00000022639	zf-C2H2	PF00096.26	1.4e-27	3	5
ENSSPAP00000022639	zf-C2H2	PF00096.26	1.4e-27	4	5
ENSSPAP00000022639	zf-C2H2	PF00096.26	1.4e-27	5	5
ENSSPAP00000022639	zf-met	PF12874.7	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000023004	-	1686	-	ENSSPAP00000022639	561 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000017093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000017093's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000017093	-	50	31.690	ENSSPAG00000013109	si:ch211-241b2.1	81	31.690
ENSSPAG00000017093	-	53	42.515	ENSSPAG00000007454	-	95	38.117
ENSSPAG00000017093	-	58	33.333	ENSSPAG00000005733	-	78	33.036
ENSSPAG00000017093	-	55	42.045	ENSSPAG00000007231	-	95	41.667
ENSSPAG00000017093	-	52	44.571	ENSSPAG00000022041	-	90	41.004
ENSSPAG00000017093	-	60	35.193	ENSSPAG00000022865	-	98	39.869
ENSSPAG00000017093	-	53	33.594	ENSSPAG00000021401	ZNF319	66	35.223
ENSSPAG00000017093	-	52	44.828	ENSSPAG00000016701	znf646	68	44.828
ENSSPAG00000017093	-	69	35.417	ENSSPAG00000013866	prdm5	70	35.417
ENSSPAG00000017093	-	57	42.857	ENSSPAG00000019245	-	100	34.579
ENSSPAG00000017093	-	54	36.596	ENSSPAG00000004429	-	90	36.910
ENSSPAG00000017093	-	55	33.230	ENSSPAG00000009256	znf384l	50	37.097
ENSSPAG00000017093	-	52	44.068	ENSSPAG00000023136	znf526	53	44.068
ENSSPAG00000017093	-	51	39.130	ENSSPAG00000006832	-	64	39.130
ENSSPAG00000017093	-	52	36.680	ENSSPAG00000006148	-	87	36.680
ENSSPAG00000017093	-	50	36.726	ENSSPAG00000004352	-	62	36.726
ENSSPAG00000017093	-	50	39.207	ENSSPAG00000014607	-	86	40.719
ENSSPAG00000017093	-	59	33.333	ENSSPAG00000021008	-	96	43.871
ENSSPAG00000017093	-	50	37.959	ENSSPAG00000015016	-	82	44.697
ENSSPAG00000017093	-	52	37.297	ENSSPAG00000023063	-	73	35.500
ENSSPAG00000017093	-	56	40.217	ENSSPAG00000006539	-	89	40.217
ENSSPAG00000017093	-	51	41.899	ENSSPAG00000002174	-	88	40.000
ENSSPAG00000017093	-	52	41.622	ENSSPAG00000008865	-	87	39.738
ENSSPAG00000017093	-	52	37.696	ENSSPAG00000005832	-	58	33.962
ENSSPAG00000017093	-	73	36.283	ENSSPAG00000007403	-	77	60.606
ENSSPAG00000017093	-	50	33.721	ENSSPAG00000011533	-	91	33.721

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000017093	-	54	37.696	ENSAPOG00000021496	-	52	37.696	Acanthochromis_polyacanthus
ENSSPAG00000017093	-	55	34.234	ENSATEG00000011202	-	65	34.940	Anabas_testudineus
ENSSPAG00000017093	-	63	32.812	ENSATEG00000024549	-	64	32.642	Anabas_testudineus
ENSSPAG00000017093	-	50	33.962	ENSATEG00000011235	-	65	34.951	Anabas_testudineus
ENSSPAG00000017093	-	50	35.897	ENSHCOG00000008205	-	81	35.897	Hippocampus_comes
ENSSPAG00000017093	-	61	34.896	ENSMALG00000014761	-	69	34.896	Monopterus_albus
ENSSPAG00000017093	-	54	31.844	ENSORLG00020009554	-	83	33.117	Oryzias_latipes_hni
ENSSPAG00000017093	-	62	35.583	ENSORLG00015012599	-	56	35.052	Oryzias_latipes_hsok
ENSSPAG00000017093	-	55	35.211	ENSOMEG00000015640	-	70	35.160	Oryzias_melastigma
ENSSPAG00000017093	-	54	42.188	ENSPLAG00000009651	-	73	42.188	Poecilia_latipinna
ENSSPAG00000017093	-	51	36.508	ENSPREG00000016270	-	74	36.957	Poecilia_reticulata
ENSSPAG00000017093	-	50	34.021	ENSPNYG00000019187	-	87	37.500	Pundamilia_nyererei
ENSSPAG00000017093	-	58	47.826	ENSPNAG00000010317	-	85	39.485	Pygocentrus_nattereri