EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000017539 (Gene tree)
Gene ID: 103361459
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 19443 bases
Position: chrKK580577.1:54238-73680
Accession: 103361459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000023380	Ribonuc_2-5A	PF06479.12	4.8e-40	1	1
ENSSPAP00000023317	Ribonuc_2-5A	PF06479.12	4.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000023758	-	3183	-	ENSSPAP00000023380	1060 (aa)	-	-
ENSSPAT00000023695	-	5568	XM_008287541	ENSSPAP00000023317	1075 (aa)	XP_008285763	UPI0004952BA6

Gene Model

Click here to download ENSSPAG00000017539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000017539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000017539	ern1	74	62.222	ENSSPAG00000013487	ern2	91	62.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000017539	ern1	98	94.240	ENSAPOG00000009999	ern1	100	93.611	Acanthochromis_polyacanthus
ENSSPAG00000017539	ern1	99	89.821	ENSACIG00000021716	ern1	99	89.788	Amphilophus_citrinellus
ENSSPAG00000017539	ern1	99	94.602	ENSAOCG00000012309	ern1	100	94.177	Amphiprion_ocellaris
ENSSPAG00000017539	ern1	99	94.129	ENSAPEG00000011263	ern1	98	96.865	Amphiprion_percula
ENSSPAG00000017539	ern1	99	87.921	ENSATEG00000024468	ern1	99	87.580	Anabas_testudineus
ENSSPAG00000017539	ern1	99	90.198	ENSACLG00000027919	ern1	99	90.198	Astatotilapia_calliptera
ENSSPAG00000017539	ern1	95	80.985	ENSAMXG00000000944	ern1	99	79.885	Astyanax_mexicanus
ENSSPAG00000017539	ern1	94	88.420	ENSCSEG00000014500	ern1	99	88.714	Cynoglossus_semilaevis
ENSSPAG00000017539	ern1	94	88.670	ENSCVAG00000002988	ern1	97	88.670	Cyprinodon_variegatus
ENSSPAG00000017539	ern1	89	83.598	ENSDARG00000013997	ern1	100	82.798	Danio_rerio
ENSSPAG00000017539	ern1	95	78.998	ENSELUG00000005957	ern1	98	79.191	Esox_lucius
ENSSPAG00000017539	ern1	95	88.098	ENSFHEG00000005578	ern1	96	88.098	Fundulus_heteroclitus
ENSSPAG00000017539	ern1	88	86.489	ENSGMOG00000011232	ern1	100	86.489	Gadus_morhua
ENSSPAG00000017539	ern1	95	88.749	ENSGAFG00000020231	ern1	96	88.749	Gambusia_affinis
ENSSPAG00000017539	ern1	89	91.149	ENSGACG00000011700	ern1	99	91.149	Gasterosteus_aculeatus
ENSSPAG00000017539	ern1	99	90.104	ENSHBUG00000012581	ern1	99	90.104	Haplochromis_burtoni
ENSSPAG00000017539	ern1	96	85.207	ENSHCOG00000016199	ern1	97	85.207	Hippocampus_comes
ENSSPAG00000017539	ern1	99	78.257	ENSIPUG00000011083	ern1	99	78.257	Ictalurus_punctatus
ENSSPAG00000017539	ern1	99	85.940	ENSKMAG00000019499	ern1	98	86.410	Kryptolebias_marmoratus
ENSSPAG00000017539	ern1	99	85.514	ENSLBEG00000025907	ern1	99	85.514	Labrus_bergylta
ENSSPAG00000017539	ern1	99	88.086	ENSMAMG00000023439	ern1	99	88.086	Mastacembelus_armatus
ENSSPAG00000017539	ern1	99	90.198	ENSMZEG00005003221	ern1	99	90.156	Maylandia_zebra
ENSSPAG00000017539	ern1	90	90.769	ENSMMOG00000007650	ern1	97	90.769	Mola_mola
ENSSPAG00000017539	ern1	99	87.300	ENSMALG00000017775	ern1	98	87.052	Monopterus_albus
ENSSPAG00000017539	ern1	99	89.915	ENSNBRG00000002179	ern1	99	89.915	Neolamprologus_brichardi
ENSSPAG00000017539	ern1	89	93.637	ENSONIG00000017169	ern1	98	93.637	Oreochromis_niloticus
ENSSPAG00000017539	ern1	98	85.196	ENSORLG00000008940	ern1	99	85.196	Oryzias_latipes
ENSSPAG00000017539	ern1	98	85.382	ENSORLG00020018387	ern1	99	85.382	Oryzias_latipes_hni
ENSSPAG00000017539	ern1	98	85.341	ENSORLG00015007946	ern1	99	85.341	Oryzias_latipes_hsok
ENSSPAG00000017539	ern1	98	85.927	ENSOMEG00000011741	ern1	99	85.927	Oryzias_melastigma
ENSSPAG00000017539	ern1	90	81.856	ENSPKIG00000005593	ern1	98	81.856	Paramormyrops_kingsleyae
ENSSPAG00000017539	ern1	93	87.948	ENSPMGG00000020442	ern1	97	87.512	Periophthalmus_magnuspinnatus
ENSSPAG00000017539	ern1	95	89.234	ENSPFOG00000007378	ern1	96	89.234	Poecilia_formosa
ENSSPAG00000017539	ern1	95	89.234	ENSPLAG00000014780	ern1	96	89.234	Poecilia_latipinna
ENSSPAG00000017539	ern1	95	89.331	ENSPMEG00000016324	ern1	96	89.331	Poecilia_mexicana
ENSSPAG00000017539	ern1	95	88.652	ENSPREG00000006286	ern1	96	88.652	Poecilia_reticulata
ENSSPAG00000017539	ern1	99	90.198	ENSPNYG00000017929	ern1	99	92.473	Pundamilia_nyererei
ENSSPAG00000017539	ern1	97	80.077	ENSPNAG00000029447	ern1	99	80.460	Pygocentrus_nattereri
ENSSPAG00000017539	ern1	99	87.091	ENSSMAG00000015042	ern1	99	86.849	Scophthalmus_maximus
ENSSPAG00000017539	ern1	99	90.458	ENSSDUG00000009098	ern1	99	90.411	Seriola_dumerili
ENSSPAG00000017539	ern1	99	90.178	ENSSLDG00000023254	ern1	99	90.137	Seriola_lalandi_dorsalis
ENSSPAG00000017539	ern1	95	86.575	ENSTRUG00000001041	ern1	97	86.918	Takifugu_rubripes
ENSSPAG00000017539	ern1	88	91.104	ENSTNIG00000017990	ern1	99	90.241	Tetraodon_nigroviridis
ENSSPAG00000017539	ern1	93	90.983	ENSXCOG00000010330	ern1	97	91.075	Xiphophorus_couchianus
ENSSPAG00000017539	ern1	95	88.846	ENSXMAG00000001310	ern1	96	88.846	Xiphophorus_maculatus