EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000017717 (Gene tree)
Gene ID: 103370931
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 32569 bases
Position: chrKK580104.1:142092-174660
Accession: 103370931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000023540	ResIII	PF04851.15	3.6e-06	1	1
ENSSPAP00000023480	ResIII	PF04851.15	3.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000023919	-	7922	XM_008300144	ENSSPAP00000023540	1490 (aa)	XP_008298366	-
ENSSPAT00000023859	-	8006	XM_008300126	ENSSPAP00000023480	1518 (aa)	XP_008298348	-

Gene Model

Click here to download ENSSPAG00000017717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000017717's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000017717	si:ch73-63e15.2	63	63.492	ENSSPAG00000016244	sbno1	82	54.641

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000017717	si:ch73-63e15.2	76	69.007	ENSG00000064932	SBNO2	88	69.119	Homo_sapiens
ENSSPAG00000017717	si:ch73-63e15.2	99	91.880	ENSAPOG00000003185	si:ch73-63e15.2	95	91.683	Acanthochromis_polyacanthus
ENSSPAG00000017717	si:ch73-63e15.2	100	93.289	ENSAOCG00000016581	si:ch73-63e15.2	100	93.228	Amphiprion_ocellaris
ENSSPAG00000017717	si:ch73-63e15.2	100	93.355	ENSAPEG00000008862	si:ch73-63e15.2	100	93.294	Amphiprion_percula
ENSSPAG00000017717	si:ch73-63e15.2	100	83.744	ENSATEG00000023838	si:ch73-63e15.2	93	94.530	Anabas_testudineus
ENSSPAG00000017717	si:ch73-63e15.2	74	72.987	ENSAPLG00000007158	SBNO2	89	72.987	Anas_platyrhynchos
ENSSPAG00000017717	si:ch73-63e15.2	76	68.493	ENSANAG00000026685	SBNO2	89	68.606	Aotus_nancymaae
ENSSPAG00000017717	si:ch73-63e15.2	100	81.753	ENSACLG00000005090	si:ch73-63e15.2	94	81.258	Astatotilapia_calliptera
ENSSPAG00000017717	si:ch73-63e15.2	79	81.083	ENSAMXG00000015881	si:ch73-63e15.2	87	81.083	Astyanax_mexicanus
ENSSPAG00000017717	si:ch73-63e15.2	76	82.234	ENSAMXG00000018868	sbno2a	95	81.856	Astyanax_mexicanus
ENSSPAG00000017717	si:ch73-63e15.2	76	70.060	ENSBTAG00000020780	SBNO2	88	70.060	Bos_taurus
ENSSPAG00000017717	si:ch73-63e15.2	74	70.634	ENSCAFG00000019543	SBNO2	83	70.634	Canis_familiaris
ENSSPAG00000017717	si:ch73-63e15.2	74	70.634	ENSCAFG00020017115	SBNO2	88	70.634	Canis_lupus_dingo
ENSSPAG00000017717	si:ch73-63e15.2	75	70.573	ENSCHIG00000026127	SBNO2	86	70.512	Capra_hircus
ENSSPAG00000017717	si:ch73-63e15.2	74	67.888	ENSCAPG00000005731	SBNO2	94	67.976	Cavia_aperea
ENSSPAG00000017717	si:ch73-63e15.2	75	67.418	ENSCPOG00000007477	SBNO2	87	67.436	Cavia_porcellus
ENSSPAG00000017717	si:ch73-63e15.2	76	68.493	ENSCCAG00000037518	SBNO2	89	68.606	Cebus_capucinus
ENSSPAG00000017717	si:ch73-63e15.2	76	69.290	ENSCATG00000037046	SBNO2	88	69.290	Cercocebus_atys
ENSSPAG00000017717	si:ch73-63e15.2	76	69.185	ENSCLAG00000010178	SBNO2	99	69.297	Chinchilla_lanigera
ENSSPAG00000017717	si:ch73-63e15.2	74	69.652	ENSCSAG00000012317	SBNO2	83	69.652	Chlorocebus_sabaeus
ENSSPAG00000017717	si:ch73-63e15.2	75	71.466	ENSCPBG00000008920	SBNO2	92	70.044	Chrysemys_picta_bellii
ENSSPAG00000017717	si:ch73-63e15.2	72	68.839	ENSCANG00000036745	SBNO2	96	68.839	Colobus_angolensis_palliatus
ENSSPAG00000017717	si:ch73-63e15.2	74	68.174	ENSCGRG00001023960	Sbno2	84	68.115	Cricetulus_griseus_chok1gshd
ENSSPAG00000017717	si:ch73-63e15.2	74	69.505	ENSCGRG00000011984	Sbno2	85	69.444	Cricetulus_griseus_crigri
ENSSPAG00000017717	si:ch73-63e15.2	78	90.000	ENSCSEG00000006856	si:ch73-63e15.2	98	90.000	Cynoglossus_semilaevis
ENSSPAG00000017717	si:ch73-63e15.2	100	78.710	ENSCVAG00000005663	si:ch73-63e15.2	88	82.396	Cyprinodon_variegatus
ENSSPAG00000017717	si:ch73-63e15.2	99	68.134	ENSDARG00000016188	SBNO2	87	80.000	Danio_rerio
ENSSPAG00000017717	si:ch73-63e15.2	77	78.078	ENSDARG00000098801	sbno2a	87	78.499	Danio_rerio
ENSSPAG00000017717	si:ch73-63e15.2	74	69.729	ENSDORG00000002916	Sbno2	84	70.026	Dipodomys_ordii
ENSSPAG00000017717	si:ch73-63e15.2	76	69.580	ENSEASG00005021621	SBNO2	89	70.034	Equus_asinus_asinus
ENSSPAG00000017717	si:ch73-63e15.2	76	69.666	ENSECAG00000011827	SBNO2	89	70.120	Equus_caballus
ENSSPAG00000017717	si:ch73-63e15.2	90	88.340	ENSELUG00000020457	si:ch73-63e15.2	90	77.415	Esox_lucius
ENSSPAG00000017717	si:ch73-63e15.2	75	72.408	ENSFALG00000013988	SBNO2	85	72.408	Ficedula_albicollis
ENSSPAG00000017717	si:ch73-63e15.2	73	67.613	ENSFDAG00000015186	SBNO2	85	68.146	Fukomys_damarensis
ENSSPAG00000017717	si:ch73-63e15.2	100	80.077	ENSFHEG00000022262	si:ch73-63e15.2	88	84.441	Fundulus_heteroclitus
ENSSPAG00000017717	si:ch73-63e15.2	75	88.899	ENSGMOG00000007542	si:ch73-63e15.2	96	88.899	Gadus_morhua
ENSSPAG00000017717	si:ch73-63e15.2	78	72.010	ENSGALG00000037522	SBNO2	87	71.950	Gallus_gallus
ENSSPAG00000017717	si:ch73-63e15.2	77	90.994	ENSGAFG00000004860	si:ch73-63e15.2	93	90.994	Gambusia_affinis
ENSSPAG00000017717	si:ch73-63e15.2	75	92.696	ENSGACG00000013190	si:ch73-63e15.2	95	92.696	Gasterosteus_aculeatus
ENSSPAG00000017717	si:ch73-63e15.2	82	69.405	ENSGAGG00000008348	SBNO2	93	69.405	Gopherus_agassizii
ENSSPAG00000017717	si:ch73-63e15.2	100	81.806	ENSHBUG00000010742	si:ch73-63e15.2	99	81.377	Haplochromis_burtoni
ENSSPAG00000017717	si:ch73-63e15.2	74	69.565	ENSHGLG00000008739	SBNO2	84	69.584	Heterocephalus_glaber_female
ENSSPAG00000017717	si:ch73-63e15.2	76	69.001	ENSHGLG00100005269	SBNO2	99	69.086	Heterocephalus_glaber_male
ENSSPAG00000017717	si:ch73-63e15.2	79	90.043	ENSHCOG00000000884	si:ch73-63e15.2	90	90.383	Hippocampus_comes
ENSSPAG00000017717	si:ch73-63e15.2	76	81.472	ENSIPUG00000000537	si:ch73-63e15.2	85	81.472	Ictalurus_punctatus
ENSSPAG00000017717	si:ch73-63e15.2	76	82.214	ENSIPUG00000019672	sbno2	92	83.621	Ictalurus_punctatus
ENSSPAG00000017717	si:ch73-63e15.2	74	70.174	ENSSTOG00000025832	SBNO2	84	70.374	Ictidomys_tridecemlineatus
ENSSPAG00000017717	si:ch73-63e15.2	75	66.292	ENSJJAG00000017397	Sbno2	85	66.667	Jaculus_jaculus
ENSSPAG00000017717	si:ch73-63e15.2	100	82.050	ENSKMAG00000005541	si:ch73-63e15.2	99	81.895	Kryptolebias_marmoratus
ENSSPAG00000017717	si:ch73-63e15.2	100	85.100	ENSLBEG00000025016	si:ch73-63e15.2	95	94.577	Labrus_bergylta
ENSSPAG00000017717	si:ch73-63e15.2	76	86.332	ENSLOCG00000004643	si:ch73-63e15.2	88	86.332	Lepisosteus_oculatus
ENSSPAG00000017717	si:ch73-63e15.2	73	66.489	ENSLAFG00000008824	SBNO2	89	66.227	Loxodonta_africana
ENSSPAG00000017717	si:ch73-63e15.2	76	67.692	ENSMFAG00000040030	SBNO2	90	67.692	Macaca_fascicularis
ENSSPAG00000017717	si:ch73-63e15.2	74	69.652	ENSMMUG00000010886	SBNO2	87	68.115	Macaca_mulatta
ENSSPAG00000017717	si:ch73-63e15.2	76	69.290	ENSMNEG00000039927	SBNO2	88	69.290	Macaca_nemestrina
ENSSPAG00000017717	si:ch73-63e15.2	68	70.094	ENSMLEG00000038556	SBNO2	90	70.094	Mandrillus_leucophaeus
ENSSPAG00000017717	si:ch73-63e15.2	100	85.816	ENSMAMG00000018758	si:ch73-63e15.2	100	85.493	Mastacembelus_armatus
ENSSPAG00000017717	si:ch73-63e15.2	100	81.675	ENSMZEG00005010682	si:ch73-63e15.2	94	81.180	Maylandia_zebra
ENSSPAG00000017717	si:ch73-63e15.2	76	72.828	ENSMGAG00000003801	SBNO2	90	72.828	Meleagris_gallopavo
ENSSPAG00000017717	si:ch73-63e15.2	74	69.913	ENSMAUG00000008034	Sbno2	85	70.200	Mesocricetus_auratus
ENSSPAG00000017717	si:ch73-63e15.2	76	68.895	ENSMICG00000013071	SBNO2	88	69.007	Microcebus_murinus
ENSSPAG00000017717	si:ch73-63e15.2	74	69.852	ENSMOCG00000010504	Sbno2	84	69.852	Microtus_ochrogaster
ENSSPAG00000017717	si:ch73-63e15.2	75	72.270	ENSMODG00000005382	SBNO2	82	72.270	Monodelphis_domestica
ENSSPAG00000017717	si:ch73-63e15.2	61	87.377	ENSMALG00000021831	si:ch73-63e15.2	96	87.377	Monopterus_albus
ENSSPAG00000017717	si:ch73-63e15.2	74	69.217	ENSMUSG00000035673	Sbno2	93	69.505	Mus_musculus
ENSSPAG00000017717	si:ch73-63e15.2	74	69.391	MGP_PahariEiJ_G0030976	Sbno2	84	69.505	Mus_pahari
ENSSPAG00000017717	si:ch73-63e15.2	74	69.565	MGP_SPRETEiJ_G0016381	Sbno2	90	69.679	Mus_spretus
ENSSPAG00000017717	si:ch73-63e15.2	64	72.194	ENSMPUG00000008747	SBNO2	91	72.194	Mustela_putorius_furo
ENSSPAG00000017717	si:ch73-63e15.2	74	69.217	ENSNGAG00000004308	Sbno2	86	69.217	Nannospalax_galili
ENSSPAG00000017717	si:ch73-63e15.2	80	90.064	ENSNBRG00000022968	si:ch73-63e15.2	99	90.217	Neolamprologus_brichardi
ENSSPAG00000017717	si:ch73-63e15.2	71	70.686	ENSNLEG00000001305	SBNO2	87	70.686	Nomascus_leucogenys
ENSSPAG00000017717	si:ch73-63e15.2	62	68.153	ENSMEUG00000013511	-	78	68.153	Notamacropus_eugenii
ENSSPAG00000017717	si:ch73-63e15.2	74	68.871	ENSOPRG00000017238	SBNO2	94	69.163	Ochotona_princeps
ENSSPAG00000017717	si:ch73-63e15.2	74	68.343	ENSODEG00000011822	SBNO2	85	68.366	Octodon_degus
ENSSPAG00000017717	si:ch73-63e15.2	100	82.241	ENSONIG00000002490	si:ch73-63e15.2	99	89.169	Oreochromis_niloticus
ENSSPAG00000017717	si:ch73-63e15.2	100	80.718	ENSORLG00000000913	si:ch73-63e15.2	91	83.617	Oryzias_latipes
ENSSPAG00000017717	si:ch73-63e15.2	100	80.418	ENSORLG00020010978	si:ch73-63e15.2	91	83.079	Oryzias_latipes_hni
ENSSPAG00000017717	si:ch73-63e15.2	100	80.785	ENSORLG00015000202	si:ch73-63e15.2	91	83.543	Oryzias_latipes_hsok
ENSSPAG00000017717	si:ch73-63e15.2	99	80.606	ENSOMEG00000000359	si:ch73-63e15.2	93	80.606	Oryzias_melastigma
ENSSPAG00000017717	si:ch73-63e15.2	75	67.708	ENSOARG00000011130	SBNO2	86	67.708	Ovis_aries
ENSSPAG00000017717	si:ch73-63e15.2	76	67.997	ENSPPAG00000032482	SBNO2	90	68.109	Pan_paniscus
ENSSPAG00000017717	si:ch73-63e15.2	76	68.921	ENSPTRG00000010185	SBNO2	88	69.033	Pan_troglodytes
ENSSPAG00000017717	si:ch73-63e15.2	76	65.783	ENSPANG00000009658	SBNO2	88	65.783	Papio_anubis
ENSSPAG00000017717	si:ch73-63e15.2	68	80.098	ENSPKIG00000009707	-	84	79.863	Paramormyrops_kingsleyae
ENSSPAG00000017717	si:ch73-63e15.2	92	83.759	ENSPKIG00000024201	si:ch73-63e15.2	85	83.929	Paramormyrops_kingsleyae
ENSSPAG00000017717	si:ch73-63e15.2	63	74.112	ENSPSIG00000002852	SBNO2	99	74.112	Pelodiscus_sinensis
ENSSPAG00000017717	si:ch73-63e15.2	78	88.908	ENSPMGG00000014375	si:ch73-63e15.2	92	87.997	Periophthalmus_magnuspinnatus
ENSSPAG00000017717	si:ch73-63e15.2	74	68.018	ENSPEMG00000024122	Sbno2	84	67.920	Peromyscus_maniculatus_bairdii
ENSSPAG00000017717	si:ch73-63e15.2	75	71.713	ENSPCIG00000011264	SBNO2	82	72.872	Phascolarctos_cinereus
ENSSPAG00000017717	si:ch73-63e15.2	99	79.948	ENSPFOG00000004096	si:ch73-63e15.2	99	89.064	Poecilia_formosa
ENSSPAG00000017717	si:ch73-63e15.2	100	79.935	ENSPLAG00000014653	si:ch73-63e15.2	89	84.050	Poecilia_latipinna
ENSSPAG00000017717	si:ch73-63e15.2	100	79.482	ENSPMEG00000002129	si:ch73-63e15.2	90	91.116	Poecilia_mexicana
ENSSPAG00000017717	si:ch73-63e15.2	99	79.462	ENSPREG00000006755	si:ch73-63e15.2	83	83.840	Poecilia_reticulata
ENSSPAG00000017717	si:ch73-63e15.2	71	69.274	ENSPCAG00000012256	SBNO2	79	69.274	Procavia_capensis
ENSSPAG00000017717	si:ch73-63e15.2	76	63.077	ENSPCOG00000015216	SBNO2	88	63.365	Propithecus_coquereli
ENSSPAG00000017717	si:ch73-63e15.2	100	82.657	ENSPNYG00000019926	si:ch73-63e15.2	99	82.295	Pundamilia_nyererei
ENSSPAG00000017717	si:ch73-63e15.2	76	81.842	ENSPNAG00000026609	sbno2a	90	77.049	Pygocentrus_nattereri
ENSSPAG00000017717	si:ch73-63e15.2	79	82.348	ENSPNAG00000020260	si:ch73-63e15.2	87	82.348	Pygocentrus_nattereri
ENSSPAG00000017717	si:ch73-63e15.2	76	69.119	ENSRNOG00000013987	Sbno2	90	69.231	Rattus_norvegicus
ENSSPAG00000017717	si:ch73-63e15.2	70	67.748	ENSRBIG00000009740	SBNO2	87	68.386	Rhinopithecus_bieti
ENSSPAG00000017717	si:ch73-63e15.2	66	71.326	ENSRROG00000044671	SBNO2	86	71.326	Rhinopithecus_roxellana
ENSSPAG00000017717	si:ch73-63e15.2	76	68.579	ENSSBOG00000023562	SBNO2	89	68.606	Saimiri_boliviensis_boliviensis
ENSSPAG00000017717	si:ch73-63e15.2	73	72.623	ENSSHAG00000010241	SBNO2	97	72.101	Sarcophilus_harrisii
ENSSPAG00000017717	si:ch73-63e15.2	90	83.156	ENSSFOG00015005861	si:ch73-63e15.2	95	83.106	Scleropages_formosus
ENSSPAG00000017717	si:ch73-63e15.2	100	87.814	ENSSMAG00000012489	si:ch73-63e15.2	100	87.041	Scophthalmus_maximus
ENSSPAG00000017717	si:ch73-63e15.2	100	89.189	ENSSDUG00000003527	si:ch73-63e15.2	100	88.996	Seriola_dumerili
ENSSPAG00000017717	si:ch73-63e15.2	100	88.932	ENSSLDG00000004623	si:ch73-63e15.2	100	88.739	Seriola_lalandi_dorsalis
ENSSPAG00000017717	si:ch73-63e15.2	76	69.692	ENSSSCG00000030042	SBNO2	90	69.692	Sus_scrofa
ENSSPAG00000017717	si:ch73-63e15.2	73	89.982	ENSTRUG00000018193	si:ch73-63e15.2	86	90.668	Takifugu_rubripes
ENSSPAG00000017717	si:ch73-63e15.2	68	71.415	ENSUAMG00000006568	SBNO2	91	75.918	Ursus_americanus
ENSSPAG00000017717	si:ch73-63e15.2	74	70.634	ENSVVUG00000022823	SBNO2	82	70.634	Vulpes_vulpes
ENSSPAG00000017717	si:ch73-63e15.2	69	76.316	ENSXETG00000021579	sbno2	91	76.316	Xenopus_tropicalis
ENSSPAG00000017717	si:ch73-63e15.2	88	89.807	ENSXCOG00000009209	si:ch73-63e15.2	91	90.276	Xiphophorus_couchianus
ENSSPAG00000017717	si:ch73-63e15.2	100	80.013	ENSXMAG00000012091	si:ch73-63e15.2	88	91.390	Xiphophorus_maculatus