EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000017772 (Gene tree)
Gene ID: 103354752
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1B-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 48992 bases
Position: chrKK580190.1:736466-785457
Accession: 103354752
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000023585	La	PF05383.17	2.7e-21	1	1
ENSSPAP00000023630	La	PF05383.17	2.7e-21	1	1
ENSSPAP00000023556	La	PF05383.17	2.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000023964	-	5315	XM_008278267	ENSSPAP00000023585	1080 (aa)	XP_008276489	-
ENSSPAT00000023935	-	5411	XM_008278261	ENSSPAP00000023556	1112 (aa)	XP_008276483	UPI00049620CD
ENSSPAT00000024007	-	5258	XM_008278270	ENSSPAP00000023630	1061 (aa)	XP_008276492	UPI0004979210

Gene Model

Click here to download ENSSPAG00000017772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000017772's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000017772	larp1b	91	53.243	ENSSPAG00000003910	larp1	93	51.689

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000017772	larp1b	87	55.186	ENSG00000138709	LARP1B	97	56.297	Homo_sapiens
ENSSPAG00000017772	larp1b	100	90.968	ENSAPOG00000020101	larp1b	100	90.783	Acanthochromis_polyacanthus
ENSSPAG00000017772	larp1b	53	52.921	ENSAMEG00000002748	LARP1B	98	52.870	Ailuropoda_melanoleuca
ENSSPAG00000017772	larp1b	100	77.222	ENSACIG00000023890	larp1b	100	76.944	Amphilophus_citrinellus
ENSSPAG00000017772	larp1b	90	82.586	ENSAOCG00000014268	larp1b	99	82.377	Amphiprion_ocellaris
ENSSPAG00000017772	larp1b	100	91.505	ENSAPEG00000004126	larp1b	100	91.320	Amphiprion_percula
ENSSPAG00000017772	larp1b	100	84.658	ENSATEG00000017849	larp1b	100	84.749	Anabas_testudineus
ENSSPAG00000017772	larp1b	83	54.145	ENSAPLG00000010129	LARP1B	99	53.903	Anas_platyrhynchos
ENSSPAG00000017772	larp1b	84	57.007	ENSACAG00000011338	LARP1B	99	54.842	Anolis_carolinensis
ENSSPAG00000017772	larp1b	62	54.520	ENSANAG00000034618	LARP1B	83	54.520	Aotus_nancymaae
ENSSPAG00000017772	larp1b	100	81.653	ENSACLG00000011948	larp1b	100	81.545	Astatotilapia_calliptera
ENSSPAG00000017772	larp1b	99	55.751	ENSAMXG00000006805	larp1b	86	60.311	Astyanax_mexicanus
ENSSPAG00000017772	larp1b	88	57.157	ENSBTAG00000012135	LARP1B	99	48.818	Bos_taurus
ENSSPAG00000017772	larp1b	82	56.801	ENSCJAG00000003338	LARP1B	99	57.013	Callithrix_jacchus
ENSSPAG00000017772	larp1b	86	56.490	ENSCAFG00000003831	LARP1B	99	58.119	Canis_familiaris
ENSSPAG00000017772	larp1b	86	56.269	ENSCAFG00020018899	LARP1B	95	58.124	Canis_lupus_dingo
ENSSPAG00000017772	larp1b	86	56.017	ENSCHIG00000023144	LARP1B	95	56.649	Capra_hircus
ENSSPAG00000017772	larp1b	85	55.335	ENSCCAG00000021948	LARP1B	97	56.405	Cebus_capucinus
ENSSPAG00000017772	larp1b	83	55.198	ENSCATG00000013541	LARP1B	97	55.603	Cercocebus_atys
ENSSPAG00000017772	larp1b	82	56.284	ENSCSAG00000003582	LARP1B	97	55.854	Chlorocebus_sabaeus
ENSSPAG00000017772	larp1b	82	52.814	ENSCHOG00000005354	LARP1B	97	52.706	Choloepus_hoffmanni
ENSSPAG00000017772	larp1b	88	55.791	ENSCPBG00000017480	LARP1B	90	55.488	Chrysemys_picta_bellii
ENSSPAG00000017772	larp1b	82	55.736	ENSCANG00000026958	LARP1B	97	55.857	Colobus_angolensis_palliatus
ENSSPAG00000017772	larp1b	100	76.481	ENSCSEG00000013519	larp1b	95	78.585	Cynoglossus_semilaevis
ENSSPAG00000017772	larp1b	100	80.094	ENSCVAG00000005046	larp1b	100	78.435	Cyprinodon_variegatus
ENSSPAG00000017772	larp1b	99	60.128	ENSDARG00000061169	larp1b	92	61.927	Danio_rerio
ENSSPAG00000017772	larp1b	50	49.123	ENSDNOG00000018765	-	98	51.487	Dasypus_novemcinctus
ENSSPAG00000017772	larp1b	75	53.759	ENSETEG00000012497	LARP1B	72	55.030	Echinops_telfairi
ENSSPAG00000017772	larp1b	85	45.871	ENSEBUG00000003668	larp1b	93	45.744	Eptatretus_burgeri
ENSSPAG00000017772	larp1b	86	55.901	ENSEASG00005018106	LARP1B	99	55.707	Equus_asinus_asinus
ENSSPAG00000017772	larp1b	91	54.511	ENSECAG00000001088	LARP1B	84	56.687	Equus_caballus
ENSSPAG00000017772	larp1b	76	60.304	ENSELUG00000023774	larp1b	94	61.064	Esox_lucius
ENSSPAG00000017772	larp1b	51	50.626	ENSFCAG00000014650	-	99	50.268	Felis_catus
ENSSPAG00000017772	larp1b	84	55.230	ENSFALG00000008098	LARP1B	97	55.080	Ficedula_albicollis
ENSSPAG00000017772	larp1b	100	80.596	ENSFHEG00000010264	larp1b	93	82.336	Fundulus_heteroclitus
ENSSPAG00000017772	larp1b	86	72.822	ENSGMOG00000005207	larp1b	91	64.749	Gadus_morhua
ENSSPAG00000017772	larp1b	90	54.428	ENSGALG00000010207	LARP1B	91	55.155	Gallus_gallus
ENSSPAG00000017772	larp1b	89	79.267	ENSGAFG00000012012	larp1b	99	82.066	Gambusia_affinis
ENSSPAG00000017772	larp1b	100	71.290	ENSGACG00000004609	larp1b	100	72.173	Gasterosteus_aculeatus
ENSSPAG00000017772	larp1b	93	53.684	ENSGAGG00000017209	LARP1B	96	53.069	Gopherus_agassizii
ENSSPAG00000017772	larp1b	82	56.082	ENSGGOG00000015900	LARP1B	97	56.189	Gorilla_gorilla
ENSSPAG00000017772	larp1b	100	81.942	ENSHBUG00000009730	larp1b	100	81.835	Haplochromis_burtoni
ENSSPAG00000017772	larp1b	66	79.915	ENSHCOG00000000918	larp1b	96	82.912	Hippocampus_comes
ENSSPAG00000017772	larp1b	99	60.606	ENSIPUG00000012138	larp1b	94	61.296	Ictalurus_punctatus
ENSSPAG00000017772	larp1b	99	76.853	ENSKMAG00000011589	larp1b	97	77.788	Kryptolebias_marmoratus
ENSSPAG00000017772	larp1b	100	81.818	ENSLBEG00000005655	larp1b	100	82.049	Labrus_bergylta
ENSSPAG00000017772	larp1b	92	58.144	ENSLACG00000015247	LARP1B	88	59.375	Latimeria_chalumnae
ENSSPAG00000017772	larp1b	90	63.765	ENSLOCG00000010684	larp1b	94	61.491	Lepisosteus_oculatus
ENSSPAG00000017772	larp1b	82	56.681	ENSMFAG00000002218	LARP1B	97	56.789	Macaca_fascicularis
ENSSPAG00000017772	larp1b	82	56.681	ENSMMUG00000021347	LARP1B	97	56.789	Macaca_mulatta
ENSSPAG00000017772	larp1b	82	51.330	ENSMNEG00000030406	LARP1B	97	51.552	Macaca_nemestrina
ENSSPAG00000017772	larp1b	82	55.448	ENSMLEG00000009306	LARP1B	97	55.879	Mandrillus_leucophaeus
ENSSPAG00000017772	larp1b	99	85.018	ENSMAMG00000000081	larp1b	97	87.103	Mastacembelus_armatus
ENSSPAG00000017772	larp1b	77	80.708	ENSMZEG00005002545	larp1b	100	80.440	Maylandia_zebra
ENSSPAG00000017772	larp1b	82	50.000	ENSMGAG00000004809	LARP1B	99	50.851	Meleagris_gallopavo
ENSSPAG00000017772	larp1b	82	58.515	ENSMICG00000036111	LARP1B	97	58.188	Microcebus_murinus
ENSSPAG00000017772	larp1b	50	38.899	ENSMICG00000028052	-	97	39.736	Microcebus_murinus
ENSSPAG00000017772	larp1b	87	56.453	ENSMODG00000012300	LARP1B	89	55.491	Monodelphis_domestica
ENSSPAG00000017772	larp1b	100	82.708	ENSMALG00000003638	larp1b	100	82.617	Monopterus_albus
ENSSPAG00000017772	larp1b	88	56.358	ENSMPUG00000017365	LARP1B	86	56.012	Mustela_putorius_furo
ENSSPAG00000017772	larp1b	84	54.676	ENSMLUG00000010229	LARP1B	99	55.263	Myotis_lucifugus
ENSSPAG00000017772	larp1b	93	74.729	ENSNBRG00000023846	larp1b	100	77.330	Neolamprologus_brichardi
ENSSPAG00000017772	larp1b	84	54.984	ENSNLEG00000013819	LARP1B	97	56.129	Nomascus_leucogenys
ENSSPAG00000017772	larp1b	63	58.215	ENSMEUG00000010308	LARP1B	74	60.741	Notamacropus_eugenii
ENSSPAG00000017772	larp1b	75	52.308	ENSOPRG00000005478	LARP1B	89	53.019	Ochotona_princeps
ENSSPAG00000017772	larp1b	87	81.440	ENSONIG00000012386	larp1b	100	80.243	Oreochromis_niloticus
ENSSPAG00000017772	larp1b	82	55.895	ENSOCUG00000013330	LARP1B	96	55.725	Oryctolagus_cuniculus
ENSSPAG00000017772	larp1b	97	75.653	ENSORLG00000017954	larp1b	96	76.791	Oryzias_latipes
ENSSPAG00000017772	larp1b	98	76.085	ENSORLG00020013081	larp1b	96	77.238	Oryzias_latipes_hni
ENSSPAG00000017772	larp1b	98	75.648	ENSORLG00015009580	larp1b	96	76.791	Oryzias_latipes_hsok
ENSSPAG00000017772	larp1b	97	79.326	ENSOMEG00000004210	larp1b	100	78.943	Oryzias_melastigma
ENSSPAG00000017772	larp1b	83	57.906	ENSOGAG00000005771	LARP1B	100	57.470	Otolemur_garnettii
ENSSPAG00000017772	larp1b	82	57.651	ENSOARG00000015300	LARP1B	97	56.358	Ovis_aries
ENSSPAG00000017772	larp1b	82	56.297	ENSPPAG00000030439	LARP1B	97	56.405	Pan_paniscus
ENSSPAG00000017772	larp1b	51	50.626	ENSPPRG00000002743	-	99	50.268	Panthera_pardus
ENSSPAG00000017772	larp1b	51	50.717	ENSPTIG00000011225	LARP1B	99	50.358	Panthera_tigris_altaica
ENSSPAG00000017772	larp1b	82	56.189	ENSPTRG00000016437	LARP1B	97	56.297	Pan_troglodytes
ENSSPAG00000017772	larp1b	82	56.681	ENSPANG00000012488	LARP1B	97	56.789	Papio_anubis
ENSSPAG00000017772	larp1b	87	53.814	ENSPKIG00000014360	larp1b	95	53.496	Paramormyrops_kingsleyae
ENSSPAG00000017772	larp1b	86	57.055	ENSPSIG00000012885	LARP1B	99	56.392	Pelodiscus_sinensis
ENSSPAG00000017772	larp1b	77	72.651	ENSPMGG00000007207	larp1b	89	77.793	Periophthalmus_magnuspinnatus
ENSSPAG00000017772	larp1b	65	54.472	ENSPMAG00000002700	larp1b	99	49.597	Petromyzon_marinus
ENSSPAG00000017772	larp1b	78	65.896	ENSPCIG00000026516	LARP1B	94	64.763	Phascolarctos_cinereus
ENSSPAG00000017772	larp1b	100	80.668	ENSPFOG00000019519	larp1b	96	82.429	Poecilia_formosa
ENSSPAG00000017772	larp1b	62	79.286	ENSPFOG00000022837	-	99	79.286	Poecilia_formosa
ENSSPAG00000017772	larp1b	100	81.703	ENSPLAG00000007115	larp1b	96	83.476	Poecilia_latipinna
ENSSPAG00000017772	larp1b	100	81.391	ENSPMEG00000001224	larp1b	96	83.239	Poecilia_mexicana
ENSSPAG00000017772	larp1b	84	55.074	ENSPCAG00000007546	LARP1B	97	55.940	Procavia_capensis
ENSSPAG00000017772	larp1b	72	68.908	ENSPCOG00000021874	LARP1B	96	68.908	Propithecus_coquereli
ENSSPAG00000017772	larp1b	84	53.383	ENSPVAG00000005373	LARP1B	97	53.289	Pteropus_vampyrus
ENSSPAG00000017772	larp1b	77	79.783	ENSPNYG00000017357	larp1b	96	81.569	Pundamilia_nyererei
ENSSPAG00000017772	larp1b	99	59.044	ENSPNAG00000008823	larp1b	92	61.150	Pygocentrus_nattereri
ENSSPAG00000017772	larp1b	51	48.606	ENSRBIG00000039982	-	98	50.000	Rhinopithecus_bieti
ENSSPAG00000017772	larp1b	82	56.681	ENSRROG00000030771	LARP1B	97	56.789	Rhinopithecus_roxellana
ENSSPAG00000017772	larp1b	62	53.759	ENSSHAG00000014474	LARP1B	99	53.210	Sarcophilus_harrisii
ENSSPAG00000017772	larp1b	84	85.683	ENSSMAG00000006347	larp1b	93	85.054	Scophthalmus_maximus
ENSSPAG00000017772	larp1b	100	86.509	ENSSDUG00000004182	larp1b	100	86.782	Seriola_dumerili
ENSSPAG00000017772	larp1b	98	76.072	ENSSLDG00000014613	larp1b	96	83.405	Seriola_lalandi_dorsalis
ENSSPAG00000017772	larp1b	80	57.520	ENSSPUG00000011837	LARP1B	86	69.565	Sphenodon_punctatus
ENSSPAG00000017772	larp1b	84	57.311	ENSSSCG00000034280	LARP1B	98	78.652	Sus_scrofa
ENSSPAG00000017772	larp1b	74	57.875	ENSTGUG00000002098	-	84	62.079	Taeniopygia_guttata
ENSSPAG00000017772	larp1b	99	76.606	ENSTRUG00000005612	larp1b	96	76.849	Takifugu_rubripes
ENSSPAG00000017772	larp1b	90	73.864	ENSTNIG00000012398	larp1b	100	74.155	Tetraodon_nigroviridis
ENSSPAG00000017772	larp1b	63	48.536	ENSTBEG00000004177	LARP1B	66	59.048	Tupaia_belangeri
ENSSPAG00000017772	larp1b	73	57.831	ENSTTRG00000012984	LARP1B	89	57.711	Tursiops_truncatus
ENSSPAG00000017772	larp1b	86	56.224	ENSUMAG00000007373	LARP1B	95	57.659	Ursus_maritimus
ENSSPAG00000017772	larp1b	82	47.397	ENSVPAG00000007223	LARP1B	71	72.024	Vicugna_pacos
ENSSPAG00000017772	larp1b	87	55.666	ENSVVUG00000011307	LARP1B	99	57.223	Vulpes_vulpes
ENSSPAG00000017772	larp1b	91	51.741	ENSXETG00000022512	larp1b	93	52.000	Xenopus_tropicalis
ENSSPAG00000017772	larp1b	90	74.790	ENSXCOG00000004435	larp1b	98	74.790	Xiphophorus_couchianus
ENSSPAG00000017772	larp1b	100	81.408	ENSXMAG00000008150	larp1b	100	81.408	Xiphophorus_maculatus