EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000017793 (Gene tree)
Gene ID: 103359323
Gene Symbol: msi2a
Alias: cb746|fi47b09|msi2|wu:fb02d08|wu:fi32d12|wu:fi47b09
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 249856 bases
Position: chrKK580437.1:223413-473268
Accession: 103359323
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000023696	RRM_1	PF00076.22	1.9e-33	1	2
ENSSPAP00000023696	RRM_1	PF00076.22	1.9e-33	2	2
ENSSPAP00000023665	RRM_1	PF00076.22	4.2e-33	1	2
ENSSPAP00000023665	RRM_1	PF00076.22	4.2e-33	2	2
ENSSPAP00000023628	RRM_1	PF00076.22	4.2e-33	1	2
ENSSPAP00000023628	RRM_1	PF00076.22	4.2e-33	2	2
ENSSPAP00000023716	RRM_1	PF00076.22	1.4e-29	1	2
ENSSPAP00000023716	RRM_1	PF00076.22	1.4e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000024076	-	1440	-	ENSSPAP00000023696	307 (aa)	-	-
ENSSPAT00000024008	-	1811	XM_008284604	ENSSPAP00000023628	407 (aa)	XP_008282826	UPI0004963CD1
ENSSPAT00000024044	-	1740	XM_008284606	ENSSPAP00000023665	407 (aa)	XP_008282828	UPI000495D6CD
ENSSPAT00000024097	-	975	XM_008284611	ENSSPAP00000023716	324 (aa)	XP_008282833	-

Gene Model

Click here to download ENSSPAG00000017793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000017793's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000017793	msi2a	59	40.761	ENSSPAG00000008969	hnrnpa3	96	34.737
ENSSPAG00000017793	msi2a	62	47.692	ENSSPAG00000005377	-	82	41.111
ENSSPAG00000017793	msi2a	61	35.638	ENSSPAG00000021157	-	79	36.269
ENSSPAG00000017793	msi2a	57	50.000	ENSSPAG00000013787	hnrnpaba	77	41.221
ENSSPAG00000017793	msi2a	91	68.977	ENSSPAG00000013098	-	96	72.112
ENSSPAG00000017793	msi2a	61	34.783	ENSSPAG00000005946	tardbp	59	35.443
ENSSPAG00000017793	msi2a	91	37.647	ENSSPAG00000002402	dazap1	72	37.647
ENSSPAG00000017793	msi2a	61	46.809	ENSSPAG00000021014	hnrnpd	68	46.809
ENSSPAG00000017793	msi2a	61	35.638	ENSSPAG00000001196	-	79	36.269
ENSSPAG00000017793	msi2a	61	40.722	ENSSPAG00000018518	-	92	35.106
ENSSPAG00000017793	msi2a	73	67.760	ENSSPAG00000014085	-	100	76.636
ENSSPAG00000017793	msi2a	62	70.186	ENSSPAG00000015573	zgc:110796	82	71.341
ENSSPAG00000017793	msi2a	55	38.372	ENSSPAG00000001272	-	78	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000017793	msi2a	96	86.032	ENSG00000153944	MSI2	97	93.227	Homo_sapiens
ENSSPAG00000017793	msi2a	100	100.000	ENSAPOG00000001658	msi2a	100	100.000	Acanthochromis_polyacanthus
ENSSPAG00000017793	msi2a	89	81.410	ENSAMEG00000002697	MSI2	99	82.051	Ailuropoda_melanoleuca
ENSSPAG00000017793	msi2a	97	100.000	ENSACIG00000009475	msi2a	100	90.511	Amphilophus_citrinellus
ENSSPAG00000017793	msi2a	62	82.000	ENSAOCG00000014822	msi2a	69	82.000	Amphiprion_ocellaris
ENSSPAG00000017793	msi2a	100	87.988	ENSAPEG00000007706	msi2a	97	95.588	Amphiprion_percula
ENSSPAG00000017793	msi2a	100	100.000	ENSATEG00000010498	msi2a	100	100.000	Anabas_testudineus
ENSSPAG00000017793	msi2a	89	85.227	ENSATEG00000003301	-	97	95.025	Anabas_testudineus
ENSSPAG00000017793	msi2a	89	93.011	ENSACAG00000005452	MSI2	88	75.871	Anolis_carolinensis
ENSSPAG00000017793	msi2a	96	86.032	ENSANAG00000037827	MSI2	97	93.227	Aotus_nancymaae
ENSSPAG00000017793	msi2a	100	99.509	ENSACLG00000007752	msi2a	100	99.588	Astatotilapia_calliptera
ENSSPAG00000017793	msi2a	100	96.296	ENSAMXG00000032796	msi2a	97	96.414	Astyanax_mexicanus
ENSSPAG00000017793	msi2a	100	96.296	ENSAMXG00000010474	msi2b	94	96.847	Astyanax_mexicanus
ENSSPAG00000017793	msi2a	89	93.015	ENSBTAG00000004406	MSI2	94	94.348	Bos_taurus
ENSSPAG00000017793	msi2a	76	59.514	WBGene00003423	msi-1	73	61.638	Caenorhabditis_elegans
ENSSPAG00000017793	msi2a	96	86.032	ENSCJAG00000013998	MSI2	97	93.227	Callithrix_jacchus
ENSSPAG00000017793	msi2a	89	80.405	ENSCAFG00020025620	MSI2	73	91.781	Canis_lupus_dingo
ENSSPAG00000017793	msi2a	100	81.081	ENSCHIG00000016580	MSI2	97	91.633	Capra_hircus
ENSSPAG00000017793	msi2a	88	81.560	ENSCPOG00000034042	MSI2	96	87.317	Cavia_porcellus
ENSSPAG00000017793	msi2a	96	86.032	ENSCCAG00000033927	MSI2	97	93.227	Cebus_capucinus
ENSSPAG00000017793	msi2a	97	82.298	ENSCATG00000040879	MSI2	97	92.829	Cercocebus_atys
ENSSPAG00000017793	msi2a	100	77.778	ENSCLAG00000014325	MSI2	100	78.063	Chinchilla_lanigera
ENSSPAG00000017793	msi2a	96	86.032	ENSCSAG00000005633	MSI2	97	93.227	Chlorocebus_sabaeus
ENSSPAG00000017793	msi2a	89	65.714	ENSCHOG00000008660	MSI2	83	86.275	Choloepus_hoffmanni
ENSSPAG00000017793	msi2a	93	94.475	ENSCPBG00000009942	MSI2	89	94.475	Chrysemys_picta_bellii
ENSSPAG00000017793	msi2a	86	50.990	ENSCING00000018579	-	90	52.657	Ciona_intestinalis
ENSSPAG00000017793	msi2a	87	53.667	ENSCSAVG00000010397	-	95	53.691	Ciona_savignyi
ENSSPAG00000017793	msi2a	95	82.547	ENSCANG00000036414	MSI2	92	93.365	Colobus_angolensis_palliatus
ENSSPAG00000017793	msi2a	96	85.443	ENSCGRG00001013330	Msi2	97	92.829	Cricetulus_griseus_chok1gshd
ENSSPAG00000017793	msi2a	89	81.150	ENSCGRG00000003141	Msi2	100	81.789	Cricetulus_griseus_crigri
ENSSPAG00000017793	msi2a	100	75.375	ENSCSEG00000003266	-	97	81.673	Cynoglossus_semilaevis
ENSSPAG00000017793	msi2a	61	77.596	ENSCSEG00000013549	msi2a	100	77.596	Cynoglossus_semilaevis
ENSSPAG00000017793	msi2a	76	82.011	ENSCSEG00000013557	msi2a	79	93.846	Cynoglossus_semilaevis
ENSSPAG00000017793	msi2a	96	100.000	ENSCVAG00000017075	msi2a	96	99.660	Cyprinodon_variegatus
ENSSPAG00000017793	msi2a	95	93.827	ENSDARG00000033901	msi2a	100	84.275	Danio_rerio
ENSSPAG00000017793	msi2a	100	93.627	ENSDARG00000032614	msi2b	100	97.030	Danio_rerio
ENSSPAG00000017793	msi2a	88	86.458	ENSDNOG00000014501	MSI2	97	93.839	Dasypus_novemcinctus
ENSSPAG00000017793	msi2a	68	89.231	ENSDORG00000005394	Msi2	79	89.231	Dipodomys_ordii
ENSSPAG00000017793	msi2a	55	96.460	ENSDORG00000028440	-	100	96.460	Dipodomys_ordii
ENSSPAG00000017793	msi2a	89	55.692	FBgn0260943	Rbp6	88	65.278	Drosophila_melanogaster
ENSSPAG00000017793	msi2a	72	72.368	ENSETEG00000012450	-	64	72.368	Echinops_telfairi
ENSSPAG00000017793	msi2a	86	62.701	ENSEBUG00000006732	msi2a	75	79.524	Eptatretus_burgeri
ENSSPAG00000017793	msi2a	89	85.612	ENSEASG00005002965	MSI2	97	73.350	Equus_asinus_asinus
ENSSPAG00000017793	msi2a	96	86.054	ENSECAG00000011435	MSI2	100	76.323	Equus_caballus
ENSSPAG00000017793	msi2a	81	70.120	ENSEEUG00000007810	MSI2	96	76.720	Erinaceus_europaeus
ENSSPAG00000017793	msi2a	93	97.531	ENSELUG00000011747	msi2a	97	91.633	Esox_lucius
ENSSPAG00000017793	msi2a	100	95.902	ENSELUG00000001361	msi2b	100	86.473	Esox_lucius
ENSSPAG00000017793	msi2a	96	86.032	ENSFCAG00000041686	MSI2	97	93.227	Felis_catus
ENSSPAG00000017793	msi2a	51	75.000	ENSFCAG00000033787	-	82	75.000	Felis_catus
ENSSPAG00000017793	msi2a	89	81.410	ENSFDAG00000016118	MSI2	100	82.051	Fukomys_damarensis
ENSSPAG00000017793	msi2a	100	100.000	ENSFHEG00000000084	msi2a	100	99.509	Fundulus_heteroclitus
ENSSPAG00000017793	msi2a	59	97.115	ENSGMOG00000007596	-	100	97.115	Gadus_morhua
ENSSPAG00000017793	msi2a	100	76.923	ENSGALG00000005567	MSI2	100	77.208	Gallus_gallus
ENSSPAG00000017793	msi2a	82	96.154	ENSGAFG00000006974	msi2a	95	96.154	Gambusia_affinis
ENSSPAG00000017793	msi2a	96	88.934	ENSGAGG00000016542	MSI2	100	79.276	Gopherus_agassizii
ENSSPAG00000017793	msi2a	95	82.547	ENSGGOG00000013182	MSI2	92	93.365	Gorilla_gorilla
ENSSPAG00000017793	msi2a	100	99.588	ENSHBUG00000020800	msi2a	100	99.588	Haplochromis_burtoni
ENSSPAG00000017793	msi2a	81	89.231	ENSHGLG00000012444	MSI2	100	69.231	Heterocephalus_glaber_female
ENSSPAG00000017793	msi2a	56	93.333	ENSHGLG00100003744	MSI2	100	75.362	Heterocephalus_glaber_male
ENSSPAG00000017793	msi2a	55	96.491	ENSHGLG00100004028	-	87	96.491	Heterocephalus_glaber_male
ENSSPAG00000017793	msi2a	100	98.280	ENSHCOG00000000266	msi2a	100	98.280	Hippocampus_comes
ENSSPAG00000017793	msi2a	95	81.481	ENSHCOG00000017241	-	98	71.571	Hippocampus_comes
ENSSPAG00000017793	msi2a	98	95.062	ENSIPUG00000021097	msi2a	100	95.062	Ictalurus_punctatus
ENSSPAG00000017793	msi2a	100	96.296	ENSIPUG00000003732	msi2b	100	86.978	Ictalurus_punctatus
ENSSPAG00000017793	msi2a	88	81.560	ENSSTOG00000007884	MSI2	96	87.317	Ictidomys_tridecemlineatus
ENSSPAG00000017793	msi2a	73	78.392	ENSJJAG00000006292	-	100	78.392	Jaculus_jaculus
ENSSPAG00000017793	msi2a	55	96.460	ENSJJAG00000009467	-	100	96.460	Jaculus_jaculus
ENSSPAG00000017793	msi2a	100	99.588	ENSKMAG00000009494	msi2a	97	99.602	Kryptolebias_marmoratus
ENSSPAG00000017793	msi2a	89	86.528	ENSLBEG00000026223	-	96	86.528	Labrus_bergylta
ENSSPAG00000017793	msi2a	100	100.000	ENSLBEG00000007061	msi2a	100	100.000	Labrus_bergylta
ENSSPAG00000017793	msi2a	55	92.941	ENSLACG00000016798	MSI2	98	92.308	Latimeria_chalumnae
ENSSPAG00000017793	msi2a	95	97.119	ENSLOCG00000004675	msi2b	100	88.698	Lepisosteus_oculatus
ENSSPAG00000017793	msi2a	95	82.547	ENSMFAG00000003775	MSI2	92	93.365	Macaca_fascicularis
ENSSPAG00000017793	msi2a	95	82.547	ENSMMUG00000002069	MSI2	92	93.365	Macaca_mulatta
ENSSPAG00000017793	msi2a	96	86.032	ENSMNEG00000045275	MSI2	97	93.227	Macaca_nemestrina
ENSSPAG00000017793	msi2a	95	82.547	ENSMLEG00000033888	MSI2	92	93.365	Mandrillus_leucophaeus
ENSSPAG00000017793	msi2a	98	94.650	ENSMAMG00000002488	-	99	94.040	Mastacembelus_armatus
ENSSPAG00000017793	msi2a	100	100.000	ENSMAMG00000010503	msi2a	100	100.000	Mastacembelus_armatus
ENSSPAG00000017793	msi2a	100	99.588	ENSMZEG00005007676	msi2a	100	99.588	Maylandia_zebra
ENSSPAG00000017793	msi2a	100	77.273	ENSMAUG00000003862	Msi2	100	77.557	Mesocricetus_auratus
ENSSPAG00000017793	msi2a	100	65.680	ENSMICG00000032913	-	96	79.710	Microcebus_murinus
ENSSPAG00000017793	msi2a	100	85.976	ENSMICG00000013598	-	97	93.227	Microcebus_murinus
ENSSPAG00000017793	msi2a	100	77.493	ENSMOCG00000005820	Msi2	100	77.778	Microtus_ochrogaster
ENSSPAG00000017793	msi2a	96	89.695	ENSMMOG00000008348	msi2a	84	99.095	Mola_mola
ENSSPAG00000017793	msi2a	73	74.396	ENSMODG00000014790	MSI2	100	74.879	Monodelphis_domestica
ENSSPAG00000017793	msi2a	100	99.346	ENSMALG00000000071	msi2a	100	100.000	Monopterus_albus
ENSSPAG00000017793	msi2a	96	85.714	MGP_CAROLIEiJ_G0016948	Msi2	100	96.460	Mus_caroli
ENSSPAG00000017793	msi2a	96	85.714	ENSMUSG00000069769	Msi2	100	96.460	Mus_musculus
ENSSPAG00000017793	msi2a	96	85.714	MGP_PahariEiJ_G0018079	Msi2	100	96.460	Mus_pahari
ENSSPAG00000017793	msi2a	96	85.714	MGP_SPRETEiJ_G0017795	Msi2	100	96.460	Mus_spretus
ENSSPAG00000017793	msi2a	89	86.689	ENSMPUG00000015377	MSI2	94	94.348	Mustela_putorius_furo
ENSSPAG00000017793	msi2a	89	86.348	ENSMLUG00000007865	MSI2	94	93.913	Myotis_lucifugus
ENSSPAG00000017793	msi2a	100	77.493	ENSNGAG00000017807	Msi2	100	77.778	Nannospalax_galili
ENSSPAG00000017793	msi2a	96	99.588	ENSNBRG00000014596	msi2a	100	94.840	Neolamprologus_brichardi
ENSSPAG00000017793	msi2a	88	84.000	ENSNLEG00000008059	MSI2	96	92.891	Nomascus_leucogenys
ENSSPAG00000017793	msi2a	72	83.553	ENSOPRG00000000872	-	64	83.553	Ochotona_princeps
ENSSPAG00000017793	msi2a	100	77.778	ENSODEG00000011974	MSI2	100	78.063	Octodon_degus
ENSSPAG00000017793	msi2a	62	100.000	ENSONIG00000001972	msi2a	84	100.000	Oreochromis_niloticus
ENSSPAG00000017793	msi2a	93	92.308	ENSOANG00000005667	MSI2	99	78.960	Ornithorhynchus_anatinus
ENSSPAG00000017793	msi2a	89	86.395	ENSOCUG00000010440	MSI2	94	94.348	Oryctolagus_cuniculus
ENSSPAG00000017793	msi2a	100	100.000	ENSORLG00000009671	msi2a	100	100.000	Oryzias_latipes
ENSSPAG00000017793	msi2a	100	100.000	ENSORLG00020021556	msi2a	100	100.000	Oryzias_latipes_hni
ENSSPAG00000017793	msi2a	100	100.000	ENSORLG00015004592	msi2a	100	100.000	Oryzias_latipes_hsok
ENSSPAG00000017793	msi2a	96	100.000	ENSOMEG00000000146	msi2a	100	100.000	Oryzias_melastigma
ENSSPAG00000017793	msi2a	89	82.653	ENSOGAG00000005621	MSI2	97	89.565	Otolemur_garnettii
ENSSPAG00000017793	msi2a	89	81.350	ENSPPAG00000037697	MSI2	92	93.365	Pan_paniscus
ENSSPAG00000017793	msi2a	89	86.395	ENSPPRG00000001848	MSI2	92	93.365	Panthera_pardus
ENSSPAG00000017793	msi2a	88	81.672	ENSPTIG00000021678	MSI2	96	81.994	Panthera_tigris_altaica
ENSSPAG00000017793	msi2a	78	75.314	ENSPTIG00000021873	-	91	75.314	Panthera_tigris_altaica
ENSSPAG00000017793	msi2a	95	82.547	ENSPTRG00000009437	MSI2	92	93.365	Pan_troglodytes
ENSSPAG00000017793	msi2a	96	86.032	ENSPANG00000022319	MSI2	97	93.227	Papio_anubis
ENSSPAG00000017793	msi2a	52	95.604	ENSPKIG00000017107	-	81	95.604	Paramormyrops_kingsleyae
ENSSPAG00000017793	msi2a	95	90.444	ENSPKIG00000007038	-	96	93.004	Paramormyrops_kingsleyae
ENSSPAG00000017793	msi2a	96	95.062	ENSPSIG00000008618	MSI2	100	81.176	Pelodiscus_sinensis
ENSSPAG00000017793	msi2a	100	87.387	ENSPMGG00000005888	msi2a	97	94.118	Periophthalmus_magnuspinnatus
ENSSPAG00000017793	msi2a	55	96.460	ENSPEMG00000021793	-	100	96.460	Peromyscus_maniculatus_bairdii
ENSSPAG00000017793	msi2a	100	80.226	ENSPCIG00000006063	MSI2	100	76.880	Phascolarctos_cinereus
ENSSPAG00000017793	msi2a	61	99.048	ENSPFOG00000019337	MSI2	92	99.048	Poecilia_formosa
ENSSPAG00000017793	msi2a	62	100.000	ENSPLAG00000000436	msi2a	76	96.479	Poecilia_latipinna
ENSSPAG00000017793	msi2a	62	88.971	ENSPMEG00000013247	msi2a	75	88.971	Poecilia_mexicana
ENSSPAG00000017793	msi2a	100	99.754	ENSPREG00000000881	msi2a	100	99.754	Poecilia_reticulata
ENSSPAG00000017793	msi2a	88	81.933	ENSPPYG00000008244	-	96	89.441	Pongo_abelii
ENSSPAG00000017793	msi2a	63	89.231	ENSPCAG00000010552	MSI2	95	89.231	Procavia_capensis
ENSSPAG00000017793	msi2a	55	95.420	ENSPCOG00000019195	-	93	96.154	Propithecus_coquereli
ENSSPAG00000017793	msi2a	88	79.181	ENSPVAG00000017053	MSI2	97	83.824	Pteropus_vampyrus
ENSSPAG00000017793	msi2a	100	99.509	ENSPNYG00000018393	msi2a	100	99.588	Pundamilia_nyererei
ENSSPAG00000017793	msi2a	95	95.885	ENSPNAG00000014957	msi2a	97	96.016	Pygocentrus_nattereri
ENSSPAG00000017793	msi2a	95	96.296	ENSPNAG00000000844	msi2b	100	87.961	Pygocentrus_nattereri
ENSSPAG00000017793	msi2a	88	85.971	ENSRNOG00000025338	Msi2	97	93.532	Rattus_norvegicus
ENSSPAG00000017793	msi2a	51	73.626	ENSRBIG00000032064	-	84	73.626	Rhinopithecus_bieti
ENSSPAG00000017793	msi2a	55	96.491	ENSRROG00000034421	-	92	96.491	Rhinopithecus_roxellana
ENSSPAG00000017793	msi2a	88	84.375	ENSSBOG00000026425	MSI2	92	93.365	Saimiri_boliviensis_boliviensis
ENSSPAG00000017793	msi2a	89	81.350	ENSSHAG00000008672	MSI2	100	82.051	Sarcophilus_harrisii
ENSSPAG00000017793	msi2a	89	90.074	ENSSFOG00015021687	-	97	93.243	Scleropages_formosus
ENSSPAG00000017793	msi2a	97	82.143	ENSSFOG00015012168	msi2b	100	68.998	Scleropages_formosus
ENSSPAG00000017793	msi2a	100	100.000	ENSSMAG00000018484	msi2a	100	100.000	Scophthalmus_maximus
ENSSPAG00000017793	msi2a	100	79.070	ENSSDUG00000021968	-	99	94.040	Seriola_dumerili
ENSSPAG00000017793	msi2a	100	100.000	ENSSDUG00000014507	msi2a	100	100.000	Seriola_dumerili
ENSSPAG00000017793	msi2a	100	100.000	ENSSLDG00000017172	msi2a	100	100.000	Seriola_lalandi_dorsalis
ENSSPAG00000017793	msi2a	62	92.405	ENSSPUG00000000913	-	94	92.405	Sphenodon_punctatus
ENSSPAG00000017793	msi2a	100	91.857	ENSSSCG00000038505	MSI2	100	93.416	Sus_scrofa
ENSSPAG00000017793	msi2a	56	94.286	ENSTGUG00000008452	MSI2	100	75.362	Taeniopygia_guttata
ENSSPAG00000017793	msi2a	97	98.477	ENSTRUG00000021248	msi2a	95	98.477	Takifugu_rubripes
ENSSPAG00000017793	msi2a	79	77.686	ENSTBEG00000001241	MSI2	73	77.686	Tupaia_belangeri
ENSSPAG00000017793	msi2a	89	83.556	ENSTTRG00000002189	MSI2	91	94.737	Tursiops_truncatus
ENSSPAG00000017793	msi2a	89	93.382	ENSUAMG00000000700	MSI2	96	94.595	Ursus_americanus
ENSSPAG00000017793	msi2a	93	91.829	ENSUMAG00000000505	MSI2	100	93.782	Ursus_maritimus
ENSSPAG00000017793	msi2a	59	81.868	ENSVPAG00000006837	-	62	81.868	Vicugna_pacos
ENSSPAG00000017793	msi2a	89	92.969	ENSVVUG00000011783	MSI2	98	92.411	Vulpes_vulpes
ENSSPAG00000017793	msi2a	98	98.413	ENSXCOG00000006113	msi2a	100	93.612	Xiphophorus_couchianus
ENSSPAG00000017793	msi2a	100	99.509	ENSXMAG00000000608	msi2a	100	99.509	Xiphophorus_maculatus