EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000017978 (Gene tree)
Gene ID: 103365441
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: embryonic polyadenylate-binding protein 2-B-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 7255 bases
Position: chrKK580090.1:1068296-1075550
Accession: 103365441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000023817	RRM_1	PF00076.22	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000024199	PABPN1L-201	3989	XM_008292876	ENSSPAP00000023817	263 (aa)	XP_008291098	UPI00049583BA

Gene Model

Click here to download ENSSPAG00000017978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000017978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000017978	PABPN1L	75	53.774	ENSSPAG00000021658	pabpn1	82	55.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000017978	PABPN1L	71	51.741	ENSG00000205022	PABPN1L	72	50.000	Homo_sapiens
ENSSPAG00000017978	PABPN1L	91	96.667	ENSAPOG00000000685	PABPN1L	78	96.667	Acanthochromis_polyacanthus
ENSSPAG00000017978	PABPN1L	91	88.703	ENSACIG00000021400	PABPN1L	98	86.611	Amphilophus_citrinellus
ENSSPAG00000017978	PABPN1L	100	97.338	ENSAOCG00000019844	PABPN1L	100	97.338	Amphiprion_ocellaris
ENSSPAG00000017978	PABPN1L	100	96.958	ENSAPEG00000019534	PABPN1L	100	96.958	Amphiprion_percula
ENSSPAG00000017978	PABPN1L	91	92.887	ENSATEG00000011646	PABPN1L	95	93.724	Anabas_testudineus
ENSSPAG00000017978	PABPN1L	66	56.000	ENSACAG00000013250	PABPN1L	89	54.545	Anolis_carolinensis
ENSSPAG00000017978	PABPN1L	71	53.030	ENSANAG00000038178	PABPN1L	75	51.942	Aotus_nancymaae
ENSSPAG00000017978	PABPN1L	100	92.395	ENSACLG00000025147	PABPN1L	100	93.536	Astatotilapia_calliptera
ENSSPAG00000017978	PABPN1L	55	70.345	ENSAMXG00000010873	PABPN1L	65	67.429	Astyanax_mexicanus
ENSSPAG00000017978	PABPN1L	71	53.266	ENSCJAG00000045284	PABPN1L	72	51.777	Callithrix_jacchus
ENSSPAG00000017978	PABPN1L	70	47.619	ENSCAPG00000007240	PABPN1L	53	55.263	Cavia_aperea
ENSSPAG00000017978	PABPN1L	71	46.597	ENSCPOG00000025951	PABPN1L	74	46.040	Cavia_porcellus
ENSSPAG00000017978	PABPN1L	76	53.110	ENSCCAG00000027631	PABPN1L	70	53.171	Cebus_capucinus
ENSSPAG00000017978	PABPN1L	71	52.709	ENSCATG00000031060	PABPN1L	73	51.741	Cercocebus_atys
ENSSPAG00000017978	PABPN1L	58	49.689	ENSCLAG00000000704	PABPN1L	76	45.327	Chinchilla_lanigera
ENSSPAG00000017978	PABPN1L	71	50.226	ENSCSAG00000002881	PABPN1L	54	58.282	Chlorocebus_sabaeus
ENSSPAG00000017978	PABPN1L	71	50.718	ENSCANG00000039336	PABPN1L	72	50.485	Colobus_angolensis_palliatus
ENSSPAG00000017978	PABPN1L	72	47.264	ENSCGRG00001013211	Pabpn1l	78	45.116	Cricetulus_griseus_chok1gshd
ENSSPAG00000017978	PABPN1L	72	47.264	ENSCGRG00000015868	Pabpn1l	78	45.116	Cricetulus_griseus_crigri
ENSSPAG00000017978	PABPN1L	100	84.848	ENSCSEG00000001142	pabpn1l	100	85.227	Cynoglossus_semilaevis
ENSSPAG00000017978	PABPN1L	100	90.875	ENSCVAG00000015547	PABPN1L	100	90.875	Cyprinodon_variegatus
ENSSPAG00000017978	PABPN1L	69	51.099	ENSDNOG00000034677	PABPN1L	67	51.381	Dasypus_novemcinctus
ENSSPAG00000017978	PABPN1L	73	49.500	ENSEASG00005000777	PABPN1L	71	48.500	Equus_asinus_asinus
ENSSPAG00000017978	PABPN1L	73	49.500	ENSECAG00000000378	PABPN1L	71	50.000	Equus_caballus
ENSSPAG00000017978	PABPN1L	96	65.748	ENSELUG00000018385	PABPN1L	99	65.779	Esox_lucius
ENSSPAG00000017978	PABPN1L	63	52.632	ENSFCAG00000010465	PABPN1L	73	49.261	Felis_catus
ENSSPAG00000017978	PABPN1L	62	59.146	ENSFALG00000003319	PABPN1L	66	55.952	Ficedula_albicollis
ENSSPAG00000017978	PABPN1L	59	52.469	ENSFDAG00000021067	PABPN1L	74	46.860	Fukomys_damarensis
ENSSPAG00000017978	PABPN1L	100	90.114	ENSFHEG00000018295	PABPN1L	100	89.734	Fundulus_heteroclitus
ENSSPAG00000017978	PABPN1L	100	74.532	ENSGMOG00000001475	PABPN1L	100	74.157	Gadus_morhua
ENSSPAG00000017978	PABPN1L	55	59.459	ENSGALG00000006242	PABPN1L	70	62.903	Gallus_gallus
ENSSPAG00000017978	PABPN1L	100	90.114	ENSGAFG00000012565	PABPN1L	100	90.114	Gambusia_affinis
ENSSPAG00000017978	PABPN1L	100	86.517	ENSGACG00000015428	PABPN1L	100	86.517	Gasterosteus_aculeatus
ENSSPAG00000017978	PABPN1L	57	64.238	ENSGAGG00000010613	PABPN1L	50	59.091	Gopherus_agassizii
ENSSPAG00000017978	PABPN1L	71	51.942	ENSGGOG00000012670	PABPN1L	73	50.485	Gorilla_gorilla
ENSSPAG00000017978	PABPN1L	100	93.156	ENSHBUG00000002388	PABPN1L	100	93.916	Haplochromis_burtoni
ENSSPAG00000017978	PABPN1L	100	85.448	ENSHCOG00000004151	PABPN1L	99	85.448	Hippocampus_comes
ENSSPAG00000017978	PABPN1L	67	64.088	ENSIPUG00000023583	PABPN1L	87	64.641	Ictalurus_punctatus
ENSSPAG00000017978	PABPN1L	73	47.917	ENSJJAG00000006433	Pabpn1l	73	46.341	Jaculus_jaculus
ENSSPAG00000017978	PABPN1L	82	90.698	ENSKMAG00000001112	PABPN1L	95	90.698	Kryptolebias_marmoratus
ENSSPAG00000017978	PABPN1L	100	88.679	ENSLBEG00000011647	PABPN1L	97	92.830	Labrus_bergylta
ENSSPAG00000017978	PABPN1L	67	50.000	ENSLAFG00000025902	-	58	58.333	Loxodonta_africana
ENSSPAG00000017978	PABPN1L	71	52.683	ENSMFAG00000002924	PABPN1L	73	52.195	Macaca_fascicularis
ENSSPAG00000017978	PABPN1L	71	53.398	ENSMMUG00000012438	PABPN1L	73	51.707	Macaca_mulatta
ENSSPAG00000017978	PABPN1L	71	53.140	ENSMNEG00000044808	PABPN1L	73	52.195	Macaca_nemestrina
ENSSPAG00000017978	PABPN1L	71	52.174	ENSMLEG00000032667	PABPN1L	73	51.220	Mandrillus_leucophaeus
ENSSPAG00000017978	PABPN1L	100	92.395	ENSMZEG00005002186	PABPN1L	100	93.536	Maylandia_zebra
ENSSPAG00000017978	PABPN1L	73	46.667	ENSMAUG00000014032	Pabpn1l	54	54.054	Mesocricetus_auratus
ENSSPAG00000017978	PABPN1L	71	48.756	ENSMICG00000028179	PABPN1L	73	48.259	Microcebus_murinus
ENSSPAG00000017978	PABPN1L	72	45.226	ENSMOCG00000007955	Pabpn1l	56	52.318	Microtus_ochrogaster
ENSSPAG00000017978	PABPN1L	75	94.949	ENSMMOG00000017714	PABPN1L	86	94.949	Mola_mola
ENSSPAG00000017978	PABPN1L	100	91.255	ENSMALG00000016926	PABPN1L	100	90.875	Monopterus_albus
ENSSPAG00000017978	PABPN1L	68	45.146	MGP_CAROLIEiJ_G0031670	Pabpn1l	74	43.842	Mus_caroli
ENSSPAG00000017978	PABPN1L	76	45.498	ENSMUSG00000069867	Pabpn1l	75	44.231	Mus_musculus
ENSSPAG00000017978	PABPN1L	68	45.631	MGP_PahariEiJ_G0023268	Pabpn1l	79	43.056	Mus_pahari
ENSSPAG00000017978	PABPN1L	76	45.024	MGP_SPRETEiJ_G0032788	Pabpn1l	53	54.422	Mus_spretus
ENSSPAG00000017978	PABPN1L	75	38.278	ENSMLUG00000003228	PABPN1L	52	42.593	Myotis_lucifugus
ENSSPAG00000017978	PABPN1L	76	44.498	ENSNGAG00000023992	Pabpn1l	76	43.269	Nannospalax_galili
ENSSPAG00000017978	PABPN1L	90	92.437	ENSNBRG00000017078	PABPN1L	100	93.697	Neolamprologus_brichardi
ENSSPAG00000017978	PABPN1L	71	50.000	ENSOPRG00000005597	PABPN1L	75	49.038	Ochotona_princeps
ENSSPAG00000017978	PABPN1L	65	56.725	ENSOANG00000013901	PABPN1L	65	55.429	Ornithorhynchus_anatinus
ENSSPAG00000017978	PABPN1L	100	83.650	ENSORLG00000026560	PABPN1L	100	83.270	Oryzias_latipes
ENSSPAG00000017978	PABPN1L	100	83.270	ENSORLG00020015068	PABPN1L	100	82.890	Oryzias_latipes_hni
ENSSPAG00000017978	PABPN1L	100	83.650	ENSORLG00015000397	PABPN1L	100	83.270	Oryzias_latipes_hsok
ENSSPAG00000017978	PABPN1L	100	80.989	ENSOMEG00000017896	PABPN1L	72	80.989	Oryzias_melastigma
ENSSPAG00000017978	PABPN1L	71	51.707	ENSPPAG00000028866	PABPN1L	72	50.746	Pan_paniscus
ENSSPAG00000017978	PABPN1L	63	52.632	ENSPPRG00000015106	PABPN1L	73	49.261	Panthera_pardus
ENSSPAG00000017978	PABPN1L	63	51.515	ENSPTIG00000015606	PABPN1L	63	51.515	Panthera_tigris_altaica
ENSSPAG00000017978	PABPN1L	71	51.707	ENSPTRG00000031120	PABPN1L	72	50.746	Pan_troglodytes
ENSSPAG00000017978	PABPN1L	71	52.174	ENSPANG00000026039	PABPN1L	72	51.471	Papio_anubis
ENSSPAG00000017978	PABPN1L	61	63.354	ENSPSIG00000003404	PABPN1L	82	58.929	Pelodiscus_sinensis
ENSSPAG00000017978	PABPN1L	81	87.324	ENSPMGG00000013927	PABPN1L	95	86.977	Periophthalmus_magnuspinnatus
ENSSPAG00000017978	PABPN1L	75	45.872	ENSPEMG00000016624	Pabpn1l	79	44.954	Peromyscus_maniculatus_bairdii
ENSSPAG00000017978	PABPN1L	50	62.687	ENSPCIG00000007038	-	91	62.687	Phascolarctos_cinereus
ENSSPAG00000017978	PABPN1L	100	90.494	ENSPFOG00000007001	PABPN1L	100	90.494	Poecilia_formosa
ENSSPAG00000017978	PABPN1L	100	90.494	ENSPLAG00000018431	PABPN1L	100	90.494	Poecilia_latipinna
ENSSPAG00000017978	PABPN1L	68	84.783	ENSPMEG00000000169	-	91	84.783	Poecilia_mexicana
ENSSPAG00000017978	PABPN1L	100	90.494	ENSPMEG00000009108	PABPN1L	100	90.494	Poecilia_mexicana
ENSSPAG00000017978	PABPN1L	88	90.909	ENSPREG00000022533	PABPN1L	93	91.163	Poecilia_reticulata
ENSSPAG00000017978	PABPN1L	73	53.500	ENSPPYG00000007655	PABPN1L	72	50.244	Pongo_abelii
ENSSPAG00000017978	PABPN1L	71	48.756	ENSPCOG00000024077	PABPN1L	73	48.756	Propithecus_coquereli
ENSSPAG00000017978	PABPN1L	71	49.751	ENSPVAG00000002716	PABPN1L	72	49.261	Pteropus_vampyrus
ENSSPAG00000017978	PABPN1L	100	92.395	ENSPNYG00000004803	PABPN1L	100	93.536	Pundamilia_nyererei
ENSSPAG00000017978	PABPN1L	72	48.241	ENSRNOG00000029558	Pabpn1l	52	60.000	Rattus_norvegicus
ENSSPAG00000017978	PABPN1L	71	50.962	ENSRBIG00000030740	PABPN1L	73	50.485	Rhinopithecus_bieti
ENSSPAG00000017978	PABPN1L	71	53.140	ENSRROG00000035483	-	73	51.456	Rhinopithecus_roxellana
ENSSPAG00000017978	PABPN1L	71	50.962	ENSRROG00000032240	-	73	50.485	Rhinopithecus_roxellana
ENSSPAG00000017978	PABPN1L	71	50.739	ENSSBOG00000018410	PABPN1L	72	51.724	Saimiri_boliviensis_boliviensis
ENSSPAG00000017978	PABPN1L	100	88.104	ENSSMAG00000021348	PABPN1L	100	90.335	Scophthalmus_maximus
ENSSPAG00000017978	PABPN1L	100	96.198	ENSSDUG00000006986	PABPN1L	100	96.198	Seriola_dumerili
ENSSPAG00000017978	PABPN1L	100	96.578	ENSSLDG00000021845	PABPN1L	100	96.578	Seriola_lalandi_dorsalis
ENSSPAG00000017978	PABPN1L	57	62.667	ENSSPUG00000007031	PABPN1L	66	58.553	Sphenodon_punctatus
ENSSPAG00000017978	PABPN1L	78	42.254	ENSSSCG00000036367	PABPN1L	76	46.479	Sus_scrofa
ENSSPAG00000017978	PABPN1L	100	81.369	ENSTRUG00000024725	PABPN1L	100	81.369	Takifugu_rubripes
ENSSPAG00000017978	PABPN1L	73	95.312	ENSTNIG00000009416	PABPN1L	100	95.312	Tetraodon_nigroviridis
ENSSPAG00000017978	PABPN1L	65	50.568	ENSTTRG00000004691	PABPN1L	73	47.761	Tursiops_truncatus
ENSSPAG00000017978	PABPN1L	60	53.846	ENSXETG00000011258	pabpn1l	86	51.064	Xenopus_tropicalis
ENSSPAG00000017978	PABPN1L	79	92.271	ENSXCOG00000003254	PABPN1L	93	90.698	Xiphophorus_couchianus
ENSSPAG00000017978	PABPN1L	81	87.793	ENSXMAG00000029090	PABPN1L	95	87.442	Xiphophorus_maculatus