EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000018010 (Gene tree)
Gene ID: 103354766
Gene Symbol: -
Alias: -
Full Name: oocyte zinc finger protein XlCOF29-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 5882 bases
Position: chrKK580191.1:15295-21176
Accession: 103354766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000023862	zf-C2H2	PF00096.26	2.6e-22	1	3
ENSSPAP00000023862	zf-C2H2	PF00096.26	2.6e-22	2	3
ENSSPAP00000023862	zf-C2H2	PF00096.26	2.6e-22	3	3
ENSSPAP00000023862	zf-met	PF12874.7	4.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000024244	-	2678	XM_008278286	ENSSPAP00000023862	426 (aa)	XP_008276508	UPI00049591CD

Gene Model

Click here to download ENSSPAG00000018010's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000018010's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000018010	-	55	49.524	ENSSPAG00000006208	-	80	49.524
ENSSPAG00000018010	-	50	35.338	ENSSPAG00000008958	-	90	44.262
ENSSPAG00000018010	-	50	49.315	ENSSPAG00000021008	-	91	47.273
ENSSPAG00000018010	-	50	43.662	ENSSPAG00000008485	-	86	43.662
ENSSPAG00000018010	-	58	52.703	ENSSPAG00000008950	-	68	52.703

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000018010	-	100	90.164	ENSAPOG00000008360	-	100	90.164	Acanthochromis_polyacanthus
ENSSPAG00000018010	-	100	89.977	ENSAOCG00000010567	-	100	89.977	Amphiprion_ocellaris
ENSSPAG00000018010	-	98	43.636	ENSAOCG00000016409	-	99	43.636	Amphiprion_ocellaris
ENSSPAG00000018010	-	100	89.977	ENSAPEG00000012300	-	100	89.977	Amphiprion_percula
ENSSPAG00000018010	-	98	43.636	ENSAPEG00000008746	-	100	43.636	Amphiprion_percula
ENSSPAG00000018010	-	99	62.937	ENSCVAG00000021152	-	99	63.785	Cyprinodon_variegatus
ENSSPAG00000018010	-	97	45.614	ENSELUG00000004677	-	99	45.614	Esox_lucius
ENSSPAG00000018010	-	97	49.091	ENSFHEG00000003460	-	99	49.091	Fundulus_heteroclitus
ENSSPAG00000018010	-	100	63.721	ENSFHEG00000014608	-	100	63.721	Fundulus_heteroclitus
ENSSPAG00000018010	-	96	57.407	ENSGAFG00000021013	-	94	57.407	Gambusia_affinis
ENSSPAG00000018010	-	62	48.333	ENSGAFG00000001481	-	80	56.410	Gambusia_affinis
ENSSPAG00000018010	-	57	55.556	ENSHCOG00000013256	-	88	55.556	Hippocampus_comes
ENSSPAG00000018010	-	98	48.113	ENSKMAG00000015304	-	99	48.113	Kryptolebias_marmoratus
ENSSPAG00000018010	-	100	72.897	ENSKMAG00000012097	-	100	72.897	Kryptolebias_marmoratus
ENSSPAG00000018010	-	99	38.043	ENSLBEG00000026060	-	99	38.043	Labrus_bergylta
ENSSPAG00000018010	-	97	52.239	ENSOMEG00000019811	-	96	52.239	Oryzias_melastigma
ENSSPAG00000018010	-	98	49.074	ENSPFOG00000000667	-	99	49.074	Poecilia_formosa
ENSSPAG00000018010	-	98	49.074	ENSPLAG00000013745	-	99	49.074	Poecilia_latipinna
ENSSPAG00000018010	-	98	46.988	ENSPREG00000021124	-	98	48.148	Poecilia_reticulata
ENSSPAG00000018010	-	97	47.436	ENSPNAG00000019887	-	97	46.429	Pygocentrus_nattereri
ENSSPAG00000018010	-	94	44.681	ENSSMAG00000013663	-	99	44.681	Scophthalmus_maximus
ENSSPAG00000018010	-	97	49.091	ENSSLDG00000021278	-	98	49.091	Seriola_lalandi_dorsalis