EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000018359 (Gene tree)
Gene ID: -
Gene Symbol: rif1
Alias: fc38c03|si:dkey-89p3.2|wu:fc38c03
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 33359 bases
Position: chrKK581846.1:11221-44579
Accession: 103372538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000024338	Rif1_N	PF12231.8	2.4e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000024739	-	4452	XM_008302202	ENSSPAP00000024338	1483 (aa)	XP_008300424	-

Gene Model

Click here to download ENSSPAG00000018359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000018359's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000018359	rif1	76	57.172	ENSG00000080345	RIF1	51	60.880	Homo_sapiens
ENSSPAG00000018359	rif1	97	79.612	ENSAPOG00000011073	rif1	63	79.612	Acanthochromis_polyacanthus
ENSSPAG00000018359	rif1	75	57.755	ENSAMEG00000008461	RIF1	50	57.755	Ailuropoda_melanoleuca
ENSSPAG00000018359	rif1	88	79.276	ENSACIG00000017765	rif1	61	79.276	Amphilophus_citrinellus
ENSSPAG00000018359	rif1	96	82.794	ENSAOCG00000017231	rif1	63	82.794	Amphiprion_ocellaris
ENSSPAG00000018359	rif1	90	83.570	ENSAPEG00000013228	rif1	61	83.570	Amphiprion_percula
ENSSPAG00000018359	rif1	94	78.296	ENSATEG00000022887	rif1	64	78.296	Anabas_testudineus
ENSSPAG00000018359	rif1	73	50.977	ENSAPLG00000007092	RIF1	53	63.134	Anas_platyrhynchos
ENSSPAG00000018359	rif1	77	55.102	ENSACAG00000003714	RIF1	53	55.102	Anolis_carolinensis
ENSSPAG00000018359	rif1	76	57.347	ENSANAG00000024840	RIF1	50	57.347	Aotus_nancymaae
ENSSPAG00000018359	rif1	98	64.330	ENSAMXG00000010910	rif1	64	64.950	Astyanax_mexicanus
ENSSPAG00000018359	rif1	75	57.143	ENSCJAG00000003138	RIF1	50	57.143	Callithrix_jacchus
ENSSPAG00000018359	rif1	76	57.260	ENSCAFG00020016401	RIF1	51	57.260	Canis_lupus_dingo
ENSSPAG00000018359	rif1	75	59.259	ENSCHIG00000020327	RIF1	50	55.922	Capra_hircus
ENSSPAG00000018359	rif1	73	53.138	ENSCPOG00000037898	RIF1	52	53.593	Cavia_porcellus
ENSSPAG00000018359	rif1	76	57.290	ENSCATG00000033353	RIF1	50	57.290	Cercocebus_atys
ENSSPAG00000018359	rif1	75	57.377	ENSCSAG00000016089	RIF1	50	57.377	Chlorocebus_sabaeus
ENSSPAG00000018359	rif1	76	58.218	ENSCPBG00000025885	RIF1	68	57.647	Chrysemys_picta_bellii
ENSSPAG00000018359	rif1	81	55.467	ENSCGRG00001024589	Rif1	55	56.262	Cricetulus_griseus_chok1gshd
ENSSPAG00000018359	rif1	79	59.681	ENSCGRG00000010713	Rif1	53	60.592	Cricetulus_griseus_crigri
ENSSPAG00000018359	rif1	93	75.502	ENSCSEG00000003945	rif1	62	75.502	Cynoglossus_semilaevis
ENSSPAG00000018359	rif1	99	73.038	ENSCVAG00000022479	rif1	62	73.038	Cyprinodon_variegatus
ENSSPAG00000018359	rif1	95	61.522	ENSDARG00000062650	rif1	60	61.972	Danio_rerio
ENSSPAG00000018359	rif1	75	54.898	ENSETEG00000012421	RIF1	50	54.898	Echinops_telfairi
ENSSPAG00000018359	rif1	73	58.163	ENSECAG00000012679	RIF1	50	58.163	Equus_caballus
ENSSPAG00000018359	rif1	91	68.410	ENSELUG00000006826	rif1	55	68.612	Esox_lucius
ENSSPAG00000018359	rif1	76	57.260	ENSFCAG00000029742	RIF1	50	57.260	Felis_catus
ENSSPAG00000018359	rif1	66	64.780	ENSFALG00000013874	RIF1	50	64.780	Ficedula_albicollis
ENSSPAG00000018359	rif1	75	61.305	ENSFDAG00000006538	RIF1	51	57.084	Fukomys_damarensis
ENSSPAG00000018359	rif1	94	75.453	ENSFHEG00000013721	rif1	64	75.453	Fundulus_heteroclitus
ENSSPAG00000018359	rif1	86	68.367	ENSGMOG00000003517	rif1	82	68.367	Gadus_morhua
ENSSPAG00000018359	rif1	63	64.793	ENSGALG00000012484	RIF1	50	64.793	Gallus_gallus
ENSSPAG00000018359	rif1	99	73.123	ENSGAFG00000017196	rif1	69	72.254	Gambusia_affinis
ENSSPAG00000018359	rif1	92	76.858	ENSGACG00000008579	rif1	64	76.986	Gasterosteus_aculeatus
ENSSPAG00000018359	rif1	76	59.635	ENSGAGG00000012595	RIF1	57	59.635	Gopherus_agassizii
ENSSPAG00000018359	rif1	100	76.628	ENSHBUG00000007125	rif1	66	76.628	Haplochromis_burtoni
ENSSPAG00000018359	rif1	96	68.979	ENSHCOG00000015943	rif1	58	69.364	Hippocampus_comes
ENSSPAG00000018359	rif1	80	65.489	ENSIPUG00000021703	rif1	58	65.663	Ictalurus_punctatus
ENSSPAG00000018359	rif1	80	57.464	ENSSTOG00000020712	RIF1	53	57.464	Ictidomys_tridecemlineatus
ENSSPAG00000018359	rif1	82	59.275	ENSJJAG00000023000	Rif1	55	59.275	Jaculus_jaculus
ENSSPAG00000018359	rif1	98	73.347	ENSKMAG00000002852	rif1	64	73.747	Kryptolebias_marmoratus
ENSSPAG00000018359	rif1	95	76.493	ENSLBEG00000023196	rif1	57	76.493	Labrus_bergylta
ENSSPAG00000018359	rif1	75	58.149	ENSLACG00000005425	RIF1	65	58.149	Latimeria_chalumnae
ENSSPAG00000018359	rif1	92	62.200	ENSLOCG00000002657	rif1	70	62.200	Lepisosteus_oculatus
ENSSPAG00000018359	rif1	78	58.607	ENSLAFG00000009796	RIF1	52	58.607	Loxodonta_africana
ENSSPAG00000018359	rif1	76	57.495	ENSMFAG00000032233	RIF1	50	57.495	Macaca_fascicularis
ENSSPAG00000018359	rif1	76	57.495	ENSMMUG00000008611	RIF1	50	57.495	Macaca_mulatta
ENSSPAG00000018359	rif1	76	57.290	ENSMLEG00000042945	RIF1	50	57.290	Mandrillus_leucophaeus
ENSSPAG00000018359	rif1	90	82.468	ENSMAMG00000001745	rif1	58	82.468	Mastacembelus_armatus
ENSSPAG00000018359	rif1	99	76.117	ENSMZEG00005020920	rif1	65	76.641	Maylandia_zebra
ENSSPAG00000018359	rif1	74	63.279	ENSMGAG00000012732	RIF1	68	63.279	Meleagris_gallopavo
ENSSPAG00000018359	rif1	73	60.497	ENSMAUG00000013158	Rif1	51	60.497	Mesocricetus_auratus
ENSSPAG00000018359	rif1	75	52.535	ENSMOCG00000009381	Rif1	50	52.535	Microtus_ochrogaster
ENSSPAG00000018359	rif1	93	77.439	ENSMMOG00000006519	rif1	61	77.439	Mola_mola
ENSSPAG00000018359	rif1	75	58.487	ENSMODG00000003703	RIF1	50	58.487	Monodelphis_domestica
ENSSPAG00000018359	rif1	94	73.512	ENSMALG00000016759	rif1	71	73.846	Monopterus_albus
ENSSPAG00000018359	rif1	74	56.996	MGP_CAROLIEiJ_G0023555	Rif1	59	56.996	Mus_caroli
ENSSPAG00000018359	rif1	74	56.389	ENSMUSG00000036202	Rif1	59	56.389	Mus_musculus
ENSSPAG00000018359	rif1	79	50.206	MGP_PahariEiJ_G0025006	Rif1	58	50.206	Mus_pahari
ENSSPAG00000018359	rif1	74	57.407	MGP_SPRETEiJ_G0024476	Rif1	59	57.407	Mus_spretus
ENSSPAG00000018359	rif1	76	57.755	ENSMPUG00000000371	RIF1	59	57.755	Mustela_putorius_furo
ENSSPAG00000018359	rif1	79	57.258	ENSNGAG00000009268	Rif1	54	57.258	Nannospalax_galili
ENSSPAG00000018359	rif1	97	78.455	ENSNBRG00000014257	rif1	63	78.455	Neolamprologus_brichardi
ENSSPAG00000018359	rif1	76	55.912	ENSNLEG00000010955	RIF1	50	55.912	Nomascus_leucogenys
ENSSPAG00000018359	rif1	78	51.674	ENSODEG00000003950	RIF1	52	52.772	Octodon_degus
ENSSPAG00000018359	rif1	99	76.967	ENSONIG00000013657	rif1	66	76.967	Oreochromis_niloticus
ENSSPAG00000018359	rif1	77	57.851	ENSOCUG00000017435	RIF1	51	58.058	Oryctolagus_cuniculus
ENSSPAG00000018359	rif1	91	69.112	ENSORLG00020001302	rif1	66	69.112	Oryzias_latipes_hni
ENSSPAG00000018359	rif1	91	69.305	ENSORLG00015000009	rif1	66	69.305	Oryzias_latipes_hsok
ENSSPAG00000018359	rif1	94	68.472	ENSOMEG00000021513	rif1	65	68.472	Oryzias_melastigma
ENSSPAG00000018359	rif1	76	57.172	ENSPPAG00000023754	RIF1	50	57.172	Pan_paniscus
ENSSPAG00000018359	rif1	76	57.260	ENSPPRG00000003618	RIF1	50	57.260	Panthera_pardus
ENSSPAG00000018359	rif1	76	57.260	ENSPTIG00000020652	RIF1	50	57.260	Panthera_tigris_altaica
ENSSPAG00000018359	rif1	76	57.172	ENSPTRG00000012534	RIF1	50	57.172	Pan_troglodytes
ENSSPAG00000018359	rif1	76	57.495	ENSPANG00000008525	RIF1	50	57.495	Papio_anubis
ENSSPAG00000018359	rif1	88	66.457	ENSPKIG00000004267	rif1	61	66.735	Paramormyrops_kingsleyae
ENSSPAG00000018359	rif1	95	74.227	ENSPMGG00000016141	rif1	79	73.374	Periophthalmus_magnuspinnatus
ENSSPAG00000018359	rif1	92	62.238	ENSPEMG00000000446	Rif1	63	62.238	Peromyscus_maniculatus_bairdii
ENSSPAG00000018359	rif1	77	58.896	ENSPCIG00000009185	RIF1	53	58.896	Phascolarctos_cinereus
ENSSPAG00000018359	rif1	99	74.849	ENSPFOG00000017804	rif1	65	74.849	Poecilia_formosa
ENSSPAG00000018359	rif1	89	80.757	ENSPFOG00000000554	-	62	80.757	Poecilia_formosa
ENSSPAG00000018359	rif1	99	75.776	ENSPLAG00000017945	rif1	66	74.447	Poecilia_latipinna
ENSSPAG00000018359	rif1	84	78.968	ENSPMEG00000006897	-	61	78.968	Poecilia_mexicana
ENSSPAG00000018359	rif1	100	73.242	ENSPREG00000018052	rif1	68	74.696	Poecilia_reticulata
ENSSPAG00000018359	rif1	76	57.787	ENSPPYG00000012846	RIF1	50	57.787	Pongo_abelii
ENSSPAG00000018359	rif1	99	76.531	ENSPNYG00000012940	rif1	68	76.531	Pundamilia_nyererei
ENSSPAG00000018359	rif1	93	65.336	ENSPNAG00000016685	rif1	63	65.927	Pygocentrus_nattereri
ENSSPAG00000018359	rif1	74	55.758	ENSRNOG00000054901	Rif1	51	56.707	Rattus_norvegicus
ENSSPAG00000018359	rif1	75	57.582	ENSRBIG00000003704	RIF1	50	57.582	Rhinopithecus_bieti
ENSSPAG00000018359	rif1	75	58.896	ENSSHAG00000018552	RIF1	50	58.896	Sarcophilus_harrisii
ENSSPAG00000018359	rif1	98	69.935	ENSSFOG00015021539	rif1	62	69.935	Scleropages_formosus
ENSSPAG00000018359	rif1	98	75.800	ENSSMAG00000011704	rif1	57	82.462	Scophthalmus_maximus
ENSSPAG00000018359	rif1	89	78.906	ENSSDUG00000015632	rif1	69	78.641	Seriola_dumerili
ENSSPAG00000018359	rif1	97	78.269	ENSSLDG00000019531	rif1	67	78.269	Seriola_lalandi_dorsalis
ENSSPAG00000018359	rif1	73	61.072	ENSSPUG00000003062	RIF1	51	61.072	Sphenodon_punctatus
ENSSPAG00000018359	rif1	79	57.938	ENSSSCG00000016395	RIF1	52	57.938	Sus_scrofa
ENSSPAG00000018359	rif1	51	59.509	ENSTGUG00000016761	RIF1	72	63.972	Taeniopygia_guttata
ENSSPAG00000018359	rif1	93	76.829	ENSTRUG00000015808	rif1	66	76.829	Takifugu_rubripes
ENSSPAG00000018359	rif1	94	74.338	ENSTNIG00000011538	rif1	65	74.338	Tetraodon_nigroviridis
ENSSPAG00000018359	rif1	79	58.230	ENSTTRG00000011190	RIF1	52	58.230	Tursiops_truncatus
ENSSPAG00000018359	rif1	76	57.260	ENSVVUG00000011293	RIF1	51	57.260	Vulpes_vulpes
ENSSPAG00000018359	rif1	82	51.653	ENSXETG00000004530	rif1	56	51.240	Xenopus_tropicalis
ENSSPAG00000018359	rif1	99	75.676	ENSXMAG00000000506	rif1	64	75.676	Xiphophorus_maculatus