EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000018518 (Gene tree)
Gene ID: 103360979
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 3302 bases
Position: chrKK580547.1:399229-402530
Accession: 103360979
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000024487	RRM_1	PF00076.22	1.1e-35	1	2
ENSSPAP00000024487	RRM_1	PF00076.22	1.1e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000024890	-	1941	XM_008286934	ENSSPAP00000024487	329 (aa)	XP_008285156	UPI000497D91B

Gene Model

Click here to download ENSSPAG00000018518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000018518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000018518	-	79	35.135	ENSSPAG00000021014	hnrnpd	78	38.785
ENSSPAG00000018518	-	60	34.694	ENSSPAG00000013787	hnrnpaba	62	34.123
ENSSPAG00000018518	-	54	37.500	ENSSPAG00000010174	rbm34	52	37.500
ENSSPAG00000018518	-	52	38.824	ENSSPAG00000005377	-	74	36.449
ENSSPAG00000018518	-	56	60.335	ENSSPAG00000001196	-	90	48.837
ENSSPAG00000018518	-	92	35.106	ENSSPAG00000017793	msi2a	61	40.722
ENSSPAG00000018518	-	59	80.513	ENSSPAG00000008969	hnrnpa3	89	64.333
ENSSPAG00000018518	-	56	60.335	ENSSPAG00000021157	-	90	48.837
ENSSPAG00000018518	-	61	41.237	ENSSPAG00000013098	-	57	40.933
ENSSPAG00000018518	-	51	31.847	ENSSPAG00000005946	tardbp	57	31.847
ENSSPAG00000018518	-	52	37.968	ENSSPAG00000002402	dazap1	62	34.978

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000018518	-	68	98.214	ENSAPOG00000019369	-	91	94.371	Acanthochromis_polyacanthus
ENSSPAG00000018518	-	53	56.571	ENSACIG00000021815	-	94	54.639	Amphilophus_citrinellus
ENSSPAG00000018518	-	99	94.311	ENSAOCG00000005289	-	99	94.311	Amphiprion_ocellaris
ENSSPAG00000018518	-	99	94.311	ENSAPEG00000004179	-	99	94.311	Amphiprion_percula
ENSSPAG00000018518	-	68	94.359	ENSATEG00000022918	hnrnpa1a	92	94.359	Anabas_testudineus
ENSSPAG00000018518	-	64	59.119	ENSATEG00000003423	-	75	59.119	Anabas_testudineus
ENSSPAG00000018518	-	71	48.291	ENSACAG00000017109	-	71	49.138	Anolis_carolinensis
ENSSPAG00000018518	-	69	89.868	ENSACLG00000006940	-	92	87.821	Astatotilapia_calliptera
ENSSPAG00000018518	-	55	63.277	ENSAMXG00000037730	-	86	53.898	Astyanax_mexicanus
ENSSPAG00000018518	-	58	82.723	ENSAMXG00000006296	hnrnpa1a	90	61.652	Astyanax_mexicanus
ENSSPAG00000018518	-	90	78.523	ENSCSEG00000007589	hnrnpa1a	91	81.073	Cynoglossus_semilaevis
ENSSPAG00000018518	-	65	54.651	ENSCSEG00000014051	-	70	54.651	Cynoglossus_semilaevis
ENSSPAG00000018518	-	68	92.889	ENSCVAG00000012637	hnrnpa1a	91	82.736	Cyprinodon_variegatus
ENSSPAG00000018518	-	66	79.787	ENSDARG00000011020	hnrnpa1a	61	72.152	Danio_rerio
ENSSPAG00000018518	-	60	54.822	ENSDORG00000026425	-	61	54.028	Dipodomys_ordii
ENSSPAG00000018518	-	68	87.113	ENSELUG00000007372	-	92	62.609	Esox_lucius
ENSSPAG00000018518	-	62	88.043	ENSGMOG00000017950	hnrnpa1a	50	87.568	Gadus_morhua
ENSSPAG00000018518	-	56	61.667	ENSGMOG00000020353	-	98	61.376	Gadus_morhua
ENSSPAG00000018518	-	69	94.714	ENSGAFG00000007751	-	90	83.713	Gambusia_affinis
ENSSPAG00000018518	-	64	89.385	ENSGACG00000009435	-	88	82.463	Gasterosteus_aculeatus
ENSSPAG00000018518	-	69	89.868	ENSHBUG00000005647	hnrnpa1a	92	88.103	Haplochromis_burtoni
ENSSPAG00000018518	-	63	83.333	ENSIPUG00000002023	hnrnpa1a	85	75.893	Ictalurus_punctatus
ENSSPAG00000018518	-	56	62.360	ENSIPUG00000001991	-	82	60.938	Ictalurus_punctatus
ENSSPAG00000018518	-	60	83.673	ENSIPUG00000022440	-	76	83.051	Ictalurus_punctatus
ENSSPAG00000018518	-	55	65.193	ENSJJAG00000009178	-	95	51.807	Jaculus_jaculus
ENSSPAG00000018518	-	99	83.036	ENSKMAG00000020859	-	90	88.449	Kryptolebias_marmoratus
ENSSPAG00000018518	-	68	90.265	ENSLBEG00000010010	hnrnpa1a	90	82.484	Labrus_bergylta
ENSSPAG00000018518	-	56	70.811	ENSMFAG00000028351	-	94	54.859	Macaca_fascicularis
ENSSPAG00000018518	-	68	93.750	ENSMAMG00000007606	-	92	84.713	Mastacembelus_armatus
ENSSPAG00000018518	-	69	89.868	ENSMZEG00005027173	hnrnpa1a	92	88.103	Maylandia_zebra
ENSSPAG00000018518	-	84	73.455	ENSMMOG00000008251	hnrnpa1a	95	83.406	Mola_mola
ENSSPAG00000018518	-	68	93.750	ENSMALG00000014091	hnrnpa1a	90	86.581	Monopterus_albus
ENSSPAG00000018518	-	53	56.571	ENSMALG00000008886	-	94	55.959	Monopterus_albus
ENSSPAG00000018518	-	59	57.895	ENSNBRG00000014469	-	87	57.895	Neolamprologus_brichardi
ENSSPAG00000018518	-	69	89.868	ENSNBRG00000018441	-	92	88.065	Neolamprologus_brichardi
ENSSPAG00000018518	-	59	50.265	ENSORLG00000029240	-	99	47.664	Oryzias_latipes
ENSSPAG00000018518	-	90	90.268	ENSORLG00000008001	-	91	90.698	Oryzias_latipes
ENSSPAG00000018518	-	88	43.599	ENSORLG00020006043	-	59	52.023	Oryzias_latipes_hni
ENSSPAG00000018518	-	90	90.268	ENSORLG00020006582	hnrnpa1a	98	92.344	Oryzias_latipes_hni
ENSSPAG00000018518	-	74	49.246	ENSORLG00020022498	-	94	49.246	Oryzias_latipes_hni
ENSSPAG00000018518	-	90	90.268	ENSORLG00015022294	-	91	90.698	Oryzias_latipes_hsok
ENSSPAG00000018518	-	99	87.651	ENSOMEG00000015959	-	91	85.050	Oryzias_melastigma
ENSSPAG00000018518	-	57	56.284	ENSPMGG00000016392	-	93	57.222	Periophthalmus_magnuspinnatus
ENSSPAG00000018518	-	88	72.414	ENSPMGG00000011804	hnrnpa1a	80	85.586	Periophthalmus_magnuspinnatus
ENSSPAG00000018518	-	68	95.111	ENSPFOG00000001825	-	91	83.766	Poecilia_formosa
ENSSPAG00000018518	-	68	95.111	ENSPMEG00000002425	-	91	83.766	Poecilia_mexicana
ENSSPAG00000018518	-	59	57.895	ENSPNYG00000020729	-	96	57.895	Pundamilia_nyererei
ENSSPAG00000018518	-	57	84.574	ENSPNAG00000021630	-	59	83.246	Pygocentrus_nattereri
ENSSPAG00000018518	-	77	65.748	ENSPNAG00000007752	hnrnpa1a	86	76.037	Pygocentrus_nattereri
ENSSPAG00000018518	-	64	90.995	ENSSMAG00000004641	hnrnpa1a	91	79.624	Scophthalmus_maximus
ENSSPAG00000018518	-	53	56.322	ENSSMAG00000010246	-	82	55.676	Scophthalmus_maximus
ENSSPAG00000018518	-	65	58.434	ENSSMAG00000010279	-	93	58.434	Scophthalmus_maximus
ENSSPAG00000018518	-	89	96.316	ENSSDUG00000013908	hnrnpa1a	96	88.462	Seriola_dumerili
ENSSPAG00000018518	-	54	59.538	ENSSDUG00000002431	-	82	59.538	Seriola_dumerili
ENSSPAG00000018518	-	89	96.196	ENSSLDG00000003718	hnrnpa1a	94	87.879	Seriola_lalandi_dorsalis
ENSSPAG00000018518	-	67	86.607	ENSTRUG00000020491	-	91	80.731	Takifugu_rubripes
ENSSPAG00000018518	-	57	60.989	ENSTNIG00000007398	-	89	54.545	Tetraodon_nigroviridis
ENSSPAG00000018518	-	57	96.296	ENSXCOG00000009001	-	92	84.810	Xiphophorus_couchianus
ENSSPAG00000018518	-	68	94.667	ENSXMAG00000008076	-	90	83.172	Xiphophorus_maculatus