EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSPAG00000018579 (Gene tree)
Gene ID
103371396
Gene Symbol
cpsf3
Alias
si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name
cleavage and polyadenylation specificity factor subunit 3-like
Gene Type
protein_coding
Species
Stegastes_partitus
Status
putative
Strand
Minus strand
Length
10702 bases
Position
chrKK581649.1:65997-76698
Accession
103371396
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPAP00000024576CPSF73-100_CPF11718.82.5e-5211
ENSSPAP00000024576Beta-CaspPF10996.88.4e-3411
ENSSPAP00000024576Lactamase_BPF00753.271.8e-1811
ENSSPAP00000024576RMMBLPF07521.121.7e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPAT00000024982-2391XM_008300707ENSSPAP00000024576686 (aa)XP_008298929UPI0004951747
Gene Model
Click here to download ENSSPAG00000018579's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000018579's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSPAG00000018579cpsf36938.525ENSSPAG00000018290ints118038.525
ENSSPAG00000018579cpsf310088.406ENSSPAG00000002906CPSF310088.406
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPAG00000018579cpsf39885.567ENSG00000119203CPSF310098.529Homo_sapiens
ENSSPAG00000018579cpsf37496.260ENSAPOG00000012241CPSF39196.260Acanthochromis_polyacanthus
ENSSPAG00000018579cpsf310098.397ENSAPOG00000022087cpsf310098.397Acanthochromis_polyacanthus
ENSSPAG00000018579cpsf39885.567ENSAMEG00000008493CPSF39985.567Ailuropoda_melanoleuca
ENSSPAG00000018579cpsf39190.415ENSACIG00000009846cpsf310083.552Amphilophus_citrinellus
ENSSPAG00000018579cpsf39186.486ENSACIG00000023663CPSF39980.406Amphilophus_citrinellus
ENSSPAG00000018579cpsf310088.116ENSAOCG00000010077CPSF310088.116Amphiprion_ocellaris
ENSSPAG00000018579cpsf310098.251ENSAOCG00000022056cpsf310098.251Amphiprion_ocellaris
ENSSPAG00000018579cpsf310088.116ENSAPEG00000021167CPSF310088.116Amphiprion_percula
ENSSPAG00000018579cpsf310098.397ENSAPEG00000019526cpsf310098.397Amphiprion_percula
ENSSPAG00000018579cpsf39995.175ENSATEG00000003959cpsf39995.175Anabas_testudineus
ENSSPAG00000018579cpsf39984.738ENSATEG00000014525CPSF39984.738Anabas_testudineus
ENSSPAG00000018579cpsf39785.821ENSAPLG00000006941CPSF39885.821Anas_platyrhynchos
ENSSPAG00000018579cpsf39283.281ENSACAG00000001759CPSF39983.281Anolis_carolinensis
ENSSPAG00000018579cpsf39880.560ENSANAG00000031254CPSF39980.781Aotus_nancymaae
ENSSPAG00000018579cpsf39186.804ENSACLG00000018846CPSF39980.406Astatotilapia_calliptera
ENSSPAG00000018579cpsf39795.317ENSACLG00000014484cpsf39995.317Astatotilapia_calliptera
ENSSPAG00000018579cpsf39987.209ENSAMXG00000004786cpsf39987.209Astyanax_mexicanus
ENSSPAG00000018579cpsf39885.567ENSBTAG00000019735CPSF39985.567Bos_taurus
ENSSPAG00000018579cpsf39057.098WBGene00013460cpsf-38957.098Caenorhabditis_elegans
ENSSPAG00000018579cpsf39885.420ENSCJAG00000006276CPSF39985.420Callithrix_jacchus
ENSSPAG00000018579cpsf39885.567ENSCAFG00000003375CPSF39585.567Canis_familiaris
ENSSPAG00000018579cpsf39088.474ENSCAFG00020026799CPSF39988.474Canis_lupus_dingo
ENSSPAG00000018579cpsf39885.567ENSCHIG00000013973CPSF39985.567Capra_hircus
ENSSPAG00000018579cpsf39885.567ENSTSYG00000002967CPSF39985.567Carlito_syrichta
ENSSPAG00000018579cpsf39685.714ENSCAPG00000013851CPSF39985.714Cavia_aperea
ENSSPAG00000018579cpsf39886.009ENSCPOG00000011299CPSF39986.009Cavia_porcellus
ENSSPAG00000018579cpsf39885.420ENSCCAG00000036730CPSF39985.420Cebus_capucinus
ENSSPAG00000018579cpsf39883.652ENSCATG00000014770CPSF39991.522Cercocebus_atys
ENSSPAG00000018579cpsf39886.009ENSCLAG00000002727CPSF39986.009Chinchilla_lanigera
ENSSPAG00000018579cpsf39877.614ENSCSAG00000007125CPSF39977.614Chlorocebus_sabaeus
ENSSPAG00000018579cpsf385100.000ENSCHOG00000000180CPSF38561.444Choloepus_hoffmanni
ENSSPAG00000018579cpsf39985.631ENSCPBG00000014074CPSF39985.631Chrysemys_picta_bellii
ENSSPAG00000018579cpsf39868.035ENSCING00000007214-9768.035Ciona_intestinalis
ENSSPAG00000018579cpsf39876.023ENSCANG00000034435CPSF39976.023Colobus_angolensis_palliatus
ENSSPAG00000018579cpsf39885.272ENSCGRG00001013134Cpsf39985.272Cricetulus_griseus_chok1gshd
ENSSPAG00000018579cpsf39885.272ENSCGRG00000018319Cpsf39985.272Cricetulus_griseus_crigri
ENSSPAG00000018579cpsf39987.518ENSCSEG00000002021CPSF39987.597Cynoglossus_semilaevis
ENSSPAG00000018579cpsf39988.372ENSCVAG00000015067CPSF39988.372Cyprinodon_variegatus
ENSSPAG00000018579cpsf310087.101ENSDARG00000027649cpsf310087.101Danio_rerio
ENSSPAG00000018579cpsf39884.728ENSDNOG00000008940CPSF39584.728Dasypus_novemcinctus
ENSSPAG00000018579cpsf39487.037ENSDORG00000014263Cpsf39987.037Dipodomys_ordii
ENSSPAG00000018579cpsf39966.569FBgn0261065Cpsf739966.569Drosophila_melanogaster
ENSSPAG00000018579cpsf39474.691ENSETEG00000003893CPSF39974.691Echinops_telfairi
ENSSPAG00000018579cpsf39975.141ENSEBUG00000009018cpsf39975.565Eptatretus_burgeri
ENSSPAG00000018579cpsf39885.567ENSEASG00005003970CPSF39985.567Equus_asinus_asinus
ENSSPAG00000018579cpsf39885.567ENSECAG00000019911CPSF39691.047Equus_caballus
ENSSPAG00000018579cpsf39870.882ENSEEUG00000015422CPSF39970.882Erinaceus_europaeus
ENSSPAG00000018579cpsf39989.985ENSELUG00000013775cpsf39989.985Esox_lucius
ENSSPAG00000018579cpsf39885.567ENSFCAG00000007852CPSF39985.567Felis_catus
ENSSPAG00000018579cpsf39484.853ENSFALG00000006572CPSF310084.853Ficedula_albicollis
ENSSPAG00000018579cpsf39885.420ENSFDAG00000006317CPSF39985.420Fukomys_damarensis
ENSSPAG00000018579cpsf310092.857ENSFHEG00000014774cpsf310092.857Fundulus_heteroclitus
ENSSPAG00000018579cpsf35868.049ENSFHEG00000012186CPSF310068.049Fundulus_heteroclitus
ENSSPAG00000018579cpsf310089.840ENSGMOG00000003157cpsf310089.840Gadus_morhua
ENSSPAG00000018579cpsf39985.776ENSGALG00000016424CPSF39985.776Gallus_gallus
ENSSPAG00000018579cpsf39790.880ENSGAFG00000019449cpsf310084.402Gambusia_affinis
ENSSPAG00000018579cpsf310089.130ENSGAFG00000008016CPSF310089.130Gambusia_affinis
ENSSPAG00000018579cpsf36780.728ENSGAGG00000025583CPSF39380.728Gopherus_agassizii
ENSSPAG00000018579cpsf39883.429ENSGGOG00000001757CPSF39196.989Gorilla_gorilla
ENSSPAG00000018579cpsf310094.898ENSHBUG00000001188cpsf310094.898Haplochromis_burtoni
ENSSPAG00000018579cpsf35880.741ENSHBUG00000014332CPSF310080.741Haplochromis_burtoni
ENSSPAG00000018579cpsf39885.862ENSHGLG00000000666CPSF39885.862Heterocephalus_glaber_female
ENSSPAG00000018579cpsf39885.862ENSHGLG00100007765CPSF39885.862Heterocephalus_glaber_male
ENSSPAG00000018579cpsf39987.064ENSHCOG00000015957CPSF39987.064Hippocampus_comes
ENSSPAG00000018579cpsf39991.959ENSHCOG00000007251cpsf39991.959Hippocampus_comes
ENSSPAG00000018579cpsf39987.645ENSIPUG00000023488cpsf39987.645Ictalurus_punctatus
ENSSPAG00000018579cpsf39885.272ENSSTOG00000004476CPSF39985.272Ictidomys_tridecemlineatus
ENSSPAG00000018579cpsf39984.751ENSJJAG00000023415Cpsf39984.751Jaculus_jaculus
ENSSPAG00000018579cpsf310094.461ENSKMAG00000002806cpsf310094.461Kryptolebias_marmoratus
ENSSPAG00000018579cpsf39988.227ENSKMAG00000007317CPSF39988.227Kryptolebias_marmoratus
ENSSPAG00000018579cpsf39689.193ENSLBEG00000013492CPSF39989.193Labrus_bergylta
ENSSPAG00000018579cpsf39985.673ENSLBEG00000020569cpsf39685.673Labrus_bergylta
ENSSPAG00000018579cpsf35489.247ENSLBEG00000015018-9989.247Labrus_bergylta
ENSSPAG00000018579cpsf39980.145ENSLACG00000008308CPSF39980.145Latimeria_chalumnae
ENSSPAG00000018579cpsf310088.023ENSLOCG00000016823cpsf310088.023Lepisosteus_oculatus
ENSSPAG00000018579cpsf39884.389ENSLAFG00000009467CPSF39984.389Loxodonta_africana
ENSSPAG00000018579cpsf39885.420ENSMFAG00000001339CPSF39493.958Macaca_fascicularis
ENSSPAG00000018579cpsf39384.651ENSMMUG00000018038CPSF39293.958Macaca_mulatta
ENSSPAG00000018579cpsf39097.200ENSMNEG00000039447CPSF39997.200Macaca_nemestrina
ENSSPAG00000018579cpsf39885.567ENSMLEG00000026825CPSF39296.983Mandrillus_leucophaeus
ENSSPAG00000018579cpsf310093.878ENSMAMG00000003076cpsf310093.878Mastacembelus_armatus
ENSSPAG00000018579cpsf39186.032ENSMAMG00000008835CPSF39980.000Mastacembelus_armatus
ENSSPAG00000018579cpsf310094.898ENSMZEG00005014358cpsf310094.898Maylandia_zebra
ENSSPAG00000018579cpsf310088.406ENSMZEG00005006258CPSF310088.406Maylandia_zebra
ENSSPAG00000018579cpsf39785.607ENSMGAG00000013995CPSF310085.607Meleagris_gallopavo
ENSSPAG00000018579cpsf35474.866ENSMAUG00000000166Cpsf39974.866Mesocricetus_auratus
ENSSPAG00000018579cpsf39880.764ENSMICG00000002363CPSF39980.764Microcebus_murinus
ENSSPAG00000018579cpsf39882.988ENSMOCG00000020067Cpsf39982.988Microtus_ochrogaster
ENSSPAG00000018579cpsf38070.238ENSMMOG00000011923CPSF38477.143Mola_mola
ENSSPAG00000018579cpsf39385.803ENSMMOG00000018212CPSF39885.803Mola_mola
ENSSPAG00000018579cpsf39884.111ENSMODG00000014703CPSF39984.111Monodelphis_domestica
ENSSPAG00000018579cpsf39284.252ENSMALG00000011474CPSF39984.252Monopterus_albus
ENSSPAG00000018579cpsf310095.481ENSMALG00000016416cpsf310095.481Monopterus_albus
ENSSPAG00000018579cpsf39885.567MGP_CAROLIEiJ_G0017640Cpsf39985.567Mus_caroli
ENSSPAG00000018579cpsf39885.567ENSMUSG00000054309Cpsf39697.034Mus_musculus
ENSSPAG00000018579cpsf39885.420MGP_PahariEiJ_G0029397Cpsf39985.420Mus_pahari
ENSSPAG00000018579cpsf39885.567MGP_SPRETEiJ_G0018481Cpsf39985.567Mus_spretus
ENSSPAG00000018579cpsf39885.735ENSMPUG00000013213CPSF39985.735Mustela_putorius_furo
ENSSPAG00000018579cpsf39885.588ENSMLUG00000010636CPSF39985.588Myotis_lucifugus
ENSSPAG00000018579cpsf39885.272ENSNGAG00000019836Cpsf39985.272Nannospalax_galili
ENSSPAG00000018579cpsf39186.804ENSNBRG00000010525CPSF39980.406Neolamprologus_brichardi
ENSSPAG00000018579cpsf310094.752ENSNBRG00000004770cpsf310094.752Neolamprologus_brichardi
ENSSPAG00000018579cpsf39885.420ENSNLEG00000013359CPSF39196.989Nomascus_leucogenys
ENSSPAG00000018579cpsf39855.523ENSMEUG00000013117-9955.670Notamacropus_eugenii
ENSSPAG00000018579cpsf39976.946ENSOPRG00000008902CPSF39976.946Ochotona_princeps
ENSSPAG00000018579cpsf39886.156ENSODEG00000003129CPSF39986.156Octodon_degus
ENSSPAG00000018579cpsf310095.190ENSONIG00000018812cpsf310095.190Oreochromis_niloticus
ENSSPAG00000018579cpsf38182.384ENSOANG00000008577CPSF39982.384Ornithorhynchus_anatinus
ENSSPAG00000018579cpsf39885.567ENSOCUG00000003728CPSF39985.567Oryctolagus_cuniculus
ENSSPAG00000018579cpsf310092.128ENSORLG00000018854cpsf310092.128Oryzias_latipes
ENSSPAG00000018579cpsf310092.274ENSORLG00020013331cpsf310092.274Oryzias_latipes_hni
ENSSPAG00000018579cpsf310092.128ENSORLG00015011017cpsf310092.128Oryzias_latipes_hsok
ENSSPAG00000018579cpsf310092.711ENSOMEG00000010647cpsf39692.711Oryzias_melastigma
ENSSPAG00000018579cpsf39875.588ENSOGAG00000001680CPSF39975.588Otolemur_garnettii
ENSSPAG00000018579cpsf39885.567ENSOARG00000015073CPSF39985.567Ovis_aries
ENSSPAG00000018579cpsf39885.567ENSPPAG00000042457CPSF39196.989Pan_paniscus
ENSSPAG00000018579cpsf39885.567ENSPPRG00000016790CPSF39985.714Panthera_pardus
ENSSPAG00000018579cpsf39885.546ENSPTIG00000003920CPSF39985.693Panthera_tigris_altaica
ENSSPAG00000018579cpsf39885.567ENSPTRG00000011638CPSF39196.989Pan_troglodytes
ENSSPAG00000018579cpsf39885.567ENSPANG00000016798CPSF39493.958Papio_anubis
ENSSPAG00000018579cpsf310088.116ENSPKIG00000023646cpsf310088.116Paramormyrops_kingsleyae
ENSSPAG00000018579cpsf39984.457ENSPSIG00000016144CPSF39984.457Pelodiscus_sinensis
ENSSPAG00000018579cpsf38291.005ENSPMGG00000006141-10078.863Periophthalmus_magnuspinnatus
ENSSPAG00000018579cpsf35881.235ENSPMGG00000015311CPSF310081.235Periophthalmus_magnuspinnatus
ENSSPAG00000018579cpsf39885.272ENSPEMG00000017668Cpsf39985.420Peromyscus_maniculatus_bairdii
ENSSPAG00000018579cpsf37988.582ENSPMAG00000004841cpsf39988.582Petromyzon_marinus
ENSSPAG00000018579cpsf39684.962ENSPCIG00000009823CPSF39885.736Phascolarctos_cinereus
ENSSPAG00000018579cpsf310089.130ENSPFOG00000010418-10089.130Poecilia_formosa
ENSSPAG00000018579cpsf310093.003ENSPFOG00000015922cpsf310093.003Poecilia_formosa
ENSSPAG00000018579cpsf35883.210ENSPLAG00000021300-10083.210Poecilia_latipinna
ENSSPAG00000018579cpsf310093.003ENSPLAG00000000882cpsf310093.003Poecilia_latipinna
ENSSPAG00000018579cpsf310093.149ENSPMEG00000018309cpsf310093.149Poecilia_mexicana
ENSSPAG00000018579cpsf39790.880ENSPREG00000014875cpsf310084.402Poecilia_reticulata
ENSSPAG00000018579cpsf310082.754ENSPREG00000004482CPSF310082.754Poecilia_reticulata
ENSSPAG00000018579cpsf39881.296ENSPPYG00000012666CPSF39981.296Pongo_abelii
ENSSPAG00000018579cpsf38565.348ENSPCAG00000015042CPSF38965.348Procavia_capensis
ENSSPAG00000018579cpsf38886.505ENSPCOG00000023016CPSF39986.505Propithecus_coquereli
ENSSPAG00000018579cpsf39885.588ENSPVAG00000005324CPSF39985.588Pteropus_vampyrus
ENSSPAG00000018579cpsf37991.697ENSPNYG00000021047CPSF39183.887Pundamilia_nyererei
ENSSPAG00000018579cpsf310094.898ENSPNYG00000004405cpsf310094.898Pundamilia_nyererei
ENSSPAG00000018579cpsf39987.791ENSPNAG00000023060cpsf39987.791Pygocentrus_nattereri
ENSSPAG00000018579cpsf39885.567ENSRNOG00000052418Cpsf39985.567Rattus_norvegicus
ENSSPAG00000018579cpsf39880.352ENSRBIG00000041615CPSF39981.019Rhinopithecus_bieti
ENSSPAG00000018579cpsf39885.567ENSRROG00000033792CPSF39985.567Rhinopithecus_roxellana
ENSSPAG00000018579cpsf39539.894YLR277CYSH19739.894Saccharomyces_cerevisiae
ENSSPAG00000018579cpsf39681.764ENSSBOG00000027263CPSF39781.764Saimiri_boliviensis_boliviensis
ENSSPAG00000018579cpsf39885.420ENSSHAG00000007024CPSF39985.420Sarcophilus_harrisii
ENSSPAG00000018579cpsf310088.116ENSSFOG00015002108cpsf310088.116Scleropages_formosus
ENSSPAG00000018579cpsf39688.280ENSSMAG00000020534CPSF39788.280Scophthalmus_maximus
ENSSPAG00000018579cpsf310088.261ENSSDUG00000018498CPSF310088.261Seriola_dumerili
ENSSPAG00000018579cpsf310095.190ENSSDUG00000002828cpsf39795.190Seriola_dumerili
ENSSPAG00000018579cpsf310095.190ENSSLDG00000008469cpsf39795.190Seriola_lalandi_dorsalis
ENSSPAG00000018579cpsf310088.261ENSSLDG00000005234CPSF310088.261Seriola_lalandi_dorsalis
ENSSPAG00000018579cpsf38883.239ENSSARG00000005186CPSF38983.239Sorex_araneus
ENSSPAG00000018579cpsf39684.454ENSSPUG00000015525CPSF39784.454Sphenodon_punctatus
ENSSPAG00000018579cpsf39885.567ENSSSCG00000020799CPSF39985.567Sus_scrofa
ENSSPAG00000018579cpsf39985.234ENSTGUG00000013016CPSF310085.234Taeniopygia_guttata
ENSSPAG00000018579cpsf35873.333ENSTRUG00000013905CPSF39973.333Takifugu_rubripes
ENSSPAG00000018579cpsf39992.263ENSTRUG00000007030cpsf39892.263Takifugu_rubripes
ENSSPAG00000018579cpsf38490.909ENSTBEG00000002707CPSF38490.909Tupaia_belangeri
ENSSPAG00000018579cpsf38673.723ENSTTRG00000000861CPSF38773.723Tursiops_truncatus
ENSSPAG00000018579cpsf39586.412ENSUAMG00000007535CPSF39486.412Ursus_americanus
ENSSPAG00000018579cpsf39384.806ENSUMAG00000003676CPSF39490.502Ursus_maritimus
ENSSPAG00000018579cpsf39285.647ENSVPAG00000008041CPSF310085.647Vicugna_pacos
ENSSPAG00000018579cpsf39885.567ENSVVUG00000002194CPSF39985.567Vulpes_vulpes
ENSSPAG00000018579cpsf39984.928ENSXETG00000008263cpsf39984.928Xenopus_tropicalis
ENSSPAG00000018579cpsf310092.566ENSXCOG00000019695cpsf310092.566Xiphophorus_couchianus
ENSSPAG00000018579cpsf35481.452ENSXCOG00000000957-8781.452Xiphophorus_couchianus
ENSSPAG00000018579cpsf310088.986ENSXMAG00000027291CPSF310088.986Xiphophorus_maculatus
ENSSPAG00000018579cpsf310093.003ENSXMAG00000009784cpsf310093.003Xiphophorus_maculatus

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