EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000018659 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: zinc finger protein 36%2C C3H1 type-like 2-A
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 948 bases
Position: chrKK580461.1:156093-157040
Accession: 103359719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000024676	zf-CCCH	PF00642.24	8.1e-31	1	4
ENSSPAP00000024676	zf-CCCH	PF00642.24	8.1e-31	2	4
ENSSPAP00000024676	zf-CCCH	PF00642.24	8.1e-31	3	4
ENSSPAP00000024676	zf-CCCH	PF00642.24	8.1e-31	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000025084	-	948	XM_008285210	ENSSPAP00000024676	315 (aa)	XP_008283432	-

Gene Model

Click here to download ENSSPAG00000018659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000018659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000018659	cth1	90	78.596	ENSAPOG00000012552	cth1	95	78.947	Acanthochromis_polyacanthus
ENSSPAG00000018659	cth1	89	64.894	ENSACIG00000016026	cth1	100	59.091	Amphilophus_citrinellus
ENSSPAG00000018659	cth1	100	82.911	ENSAOCG00000001644	cth1	100	83.861	Amphiprion_ocellaris
ENSSPAG00000018659	cth1	100	82.911	ENSAPEG00000008930	cth1	100	83.861	Amphiprion_percula
ENSSPAG00000018659	cth1	99	78.704	ENSATEG00000002281	cth1	97	77.160	Anabas_testudineus
ENSSPAG00000018659	cth1	90	62.766	ENSACLG00000015353	cth1	95	64.184	Astatotilapia_calliptera
ENSSPAG00000018659	cth1	97	56.347	ENSAMXG00000025717	cth1	79	59.289	Astyanax_mexicanus
ENSSPAG00000018659	cth1	100	70.093	ENSCSEG00000014617	cth1	100	70.093	Cynoglossus_semilaevis
ENSSPAG00000018659	cth1	100	59.494	ENSCVAG00000001680	cth1	65	58.228	Cyprinodon_variegatus
ENSSPAG00000018659	cth1	91	57.239	ENSDARG00000057328	cth1	90	57.239	Danio_rerio
ENSSPAG00000018659	cth1	99	54.651	ENSELUG00000012738	cth1	89	55.738	Esox_lucius
ENSSPAG00000018659	cth1	100	66.562	ENSFHEG00000022665	cth1	100	65.300	Fundulus_heteroclitus
ENSSPAG00000018659	cth1	99	63.551	ENSGMOG00000007360	cth1	100	60.436	Gadus_morhua
ENSSPAG00000018659	cth1	100	63.722	ENSGAFG00000019288	cth1	100	63.722	Gambusia_affinis
ENSSPAG00000018659	cth1	99	68.354	ENSGACG00000000802	cth1	99	64.873	Gasterosteus_aculeatus
ENSSPAG00000018659	cth1	100	63.492	ENSHBUG00000014400	cth1	100	64.444	Haplochromis_burtoni
ENSSPAG00000018659	cth1	98	51.768	ENSHCOG00000010276	cth1	78	56.410	Hippocampus_comes
ENSSPAG00000018659	cth1	97	56.386	ENSIPUG00000018040	cth1	90	55.298	Ictalurus_punctatus
ENSSPAG00000018659	cth1	100	68.254	ENSKMAG00000005944	cth1	100	68.254	Kryptolebias_marmoratus
ENSSPAG00000018659	cth1	100	77.160	ENSLBEG00000019253	cth1	100	78.438	Labrus_bergylta
ENSSPAG00000018659	cth1	68	49.537	ENSLOCG00000002047	cth1	99	47.222	Lepisosteus_oculatus
ENSSPAG00000018659	cth1	73	71.121	ENSMAMG00000001525	cth1	62	69.099	Mastacembelus_armatus
ENSSPAG00000018659	cth1	100	63.492	ENSMZEG00005022335	cth1	100	64.762	Maylandia_zebra
ENSSPAG00000018659	cth1	94	75.578	ENSMMOG00000020518	cth1	100	71.947	Mola_mola
ENSSPAG00000018659	cth1	100	61.497	ENSMALG00000020738	cth1	58	74.324	Monopterus_albus
ENSSPAG00000018659	cth1	89	61.649	ENSNBRG00000022789	cth1	83	63.774	Neolamprologus_brichardi
ENSSPAG00000018659	cth1	100	65.094	ENSONIG00000021318	cth1	100	64.890	Oreochromis_niloticus
ENSSPAG00000018659	cth1	100	58.491	ENSORLG00000022847	cth1	100	57.994	Oryzias_latipes
ENSSPAG00000018659	cth1	100	58.491	ENSORLG00020011979	cth1	100	58.934	Oryzias_latipes_hni
ENSSPAG00000018659	cth1	100	57.098	ENSORLG00015013084	cth1	100	57.680	Oryzias_latipes_hsok
ENSSPAG00000018659	cth1	100	57.278	ENSOMEG00000005809	cth1	85	58.044	Oryzias_melastigma
ENSSPAG00000018659	cth1	96	51.242	ENSPKIG00000015883	cth1	88	49.013	Paramormyrops_kingsleyae
ENSSPAG00000018659	cth1	99	71.605	ENSPMGG00000004275	cth1	99	72.360	Periophthalmus_magnuspinnatus
ENSSPAG00000018659	cth1	100	66.139	ENSPFOG00000013583	cth1	94	62.025	Poecilia_formosa
ENSSPAG00000018659	cth1	100	66.139	ENSPLAG00000018158	cth1	94	62.342	Poecilia_latipinna
ENSSPAG00000018659	cth1	100	65.823	ENSPMEG00000005744	cth1	100	61.709	Poecilia_mexicana
ENSSPAG00000018659	cth1	99	66.561	ENSPREG00000004099	cth1	100	63.057	Poecilia_reticulata
ENSSPAG00000018659	cth1	89	62.500	ENSPNYG00000016705	cth1	85	61.742	Pundamilia_nyererei
ENSSPAG00000018659	cth1	99	55.927	ENSPNAG00000013147	cth1	76	60.000	Pygocentrus_nattereri
ENSSPAG00000018659	cth1	91	55.853	ENSSFOG00015017190	cth1	57	63.978	Scleropages_formosus
ENSSPAG00000018659	cth1	100	76.012	ENSSMAG00000007977	cth1	100	76.947	Scophthalmus_maximus
ENSSPAG00000018659	cth1	100	76.061	ENSSDUG00000004321	cth1	100	76.061	Seriola_dumerili
ENSSPAG00000018659	cth1	100	76.596	ENSSLDG00000012760	cth1	100	75.831	Seriola_lalandi_dorsalis
ENSSPAG00000018659	cth1	99	77.439	ENSSLDG00000010023	-	100	76.667	Seriola_lalandi_dorsalis
ENSSPAG00000018659	cth1	100	77.204	ENSSLDG00000004516	-	100	76.435	Seriola_lalandi_dorsalis
ENSSPAG00000018659	cth1	100	65.732	ENSTRUG00000012770	cth1	100	64.798	Takifugu_rubripes
ENSSPAG00000018659	cth1	100	64.396	ENSTNIG00000000740	cth1	100	63.438	Tetraodon_nigroviridis
ENSSPAG00000018659	cth1	83	59.004	ENSXCOG00000003710	cth1	79	56.250	Xiphophorus_couchianus
ENSSPAG00000018659	cth1	100	65.615	ENSXMAG00000023885	cth1	100	62.776	Xiphophorus_maculatus