EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000018824 (Gene tree)
Gene ID: 103376126
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 3089 bases
Position: chrJMKM01039917.1:17226-20314
Accession: 103376126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000024908	zf-C2H2	PF00096.26	7.4e-11	1	2
ENSSPAP00000024908	zf-C2H2	PF00096.26	7.4e-11	2	2
ENSSPAP00000024908	zf-met	PF12874.7	8.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000025318	-	1137	XM_008306494	ENSSPAP00000024908	378 (aa)	XP_008304716	-

Gene Model

Click here to download ENSSPAG00000018824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000018824's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000018824	prdm12b	67	42.105	ENSSPAG00000013866	prdm5	87	42.105
ENSSPAG00000018824	prdm12b	100	73.385	ENSSPAG00000022420	-	100	73.902

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000018824	prdm12b	90	81.871	ENSG00000130711	PRDM12	99	74.740	Homo_sapiens
ENSSPAG00000018824	prdm12b	100	66.929	ENSAPOG00000018234	-	100	67.192	Acanthochromis_polyacanthus
ENSSPAG00000018824	prdm12b	100	94.010	ENSAPOG00000016051	prdm12b	100	94.010	Acanthochromis_polyacanthus
ENSSPAG00000018824	prdm12b	89	80.178	ENSAMEG00000016234	PRDM12	99	80.178	Ailuropoda_melanoleuca
ENSSPAG00000018824	prdm12b	100	78.316	ENSACIG00000005193	-	100	78.827	Amphilophus_citrinellus
ENSSPAG00000018824	prdm12b	100	93.651	ENSACIG00000019578	prdm12b	100	92.593	Amphilophus_citrinellus
ENSSPAG00000018824	prdm12b	100	96.296	ENSAOCG00000015040	prdm12b	100	96.296	Amphiprion_ocellaris
ENSSPAG00000018824	prdm12b	100	73.418	ENSAPEG00000022849	-	99	72.658	Amphiprion_percula
ENSSPAG00000018824	prdm12b	100	96.032	ENSAPEG00000015092	prdm12b	100	96.032	Amphiprion_percula
ENSSPAG00000018824	prdm12b	100	82.216	ENSATEG00000014595	-	100	82.216	Anabas_testudineus
ENSSPAG00000018824	prdm12b	94	79.272	ENSANAG00000020616	PRDM12	95	81.287	Aotus_nancymaae
ENSSPAG00000018824	prdm12b	100	88.095	ENSACLG00000011876	prdm12b	100	87.302	Astatotilapia_calliptera
ENSSPAG00000018824	prdm12b	100	76.368	ENSACLG00000007631	-	100	77.363	Astatotilapia_calliptera
ENSSPAG00000018824	prdm12b	100	80.159	ENSAMXG00000008540	PRDM12	100	80.159	Astyanax_mexicanus
ENSSPAG00000018824	prdm12b	100	81.937	ENSAMXG00000033665	prdm12b	100	81.937	Astyanax_mexicanus
ENSSPAG00000018824	prdm12b	90	81.871	ENSBTAG00000023797	PRDM12	99	76.115	Bos_taurus
ENSSPAG00000018824	prdm12b	90	81.871	ENSCJAG00000020540	PRDM12	99	75.591	Callithrix_jacchus
ENSSPAG00000018824	prdm12b	79	82.000	ENSCAFG00000023076	PRDM12	99	75.516	Canis_familiaris
ENSSPAG00000018824	prdm12b	90	81.871	ENSCAFG00020024046	PRDM12	99	76.115	Canis_lupus_dingo
ENSSPAG00000018824	prdm12b	90	81.871	ENSCHIG00000025005	PRDM12	99	76.115	Capra_hircus
ENSSPAG00000018824	prdm12b	95	76.177	ENSCPOG00000005901	PRDM12	95	80.909	Cavia_porcellus
ENSSPAG00000018824	prdm12b	90	81.871	ENSCCAG00000037485	PRDM12	99	75.591	Cebus_capucinus
ENSSPAG00000018824	prdm12b	90	81.871	ENSCATG00000020327	PRDM12	99	75.591	Cercocebus_atys
ENSSPAG00000018824	prdm12b	90	82.164	ENSCLAG00000005499	PRDM12	89	81.871	Chinchilla_lanigera
ENSSPAG00000018824	prdm12b	90	81.871	ENSCSAG00000014756	PRDM12	99	75.591	Chlorocebus_sabaeus
ENSSPAG00000018824	prdm12b	100	78.740	ENSCPBG00000022628	PRDM12	99	77.690	Chrysemys_picta_bellii
ENSSPAG00000018824	prdm12b	90	81.871	ENSCGRG00001015005	Prdm12	99	75.718	Cricetulus_griseus_chok1gshd
ENSSPAG00000018824	prdm12b	100	88.360	ENSCVAG00000017166	prdm12b	100	86.877	Cyprinodon_variegatus
ENSSPAG00000018824	prdm12b	100	79.744	ENSCVAG00000000944	-	100	80.000	Cyprinodon_variegatus
ENSSPAG00000018824	prdm12b	100	81.627	ENSDARG00000007430	prdm12b	100	81.102	Danio_rerio
ENSSPAG00000018824	prdm12b	89	81.341	ENSDNOG00000042302	PRDM12	99	75.916	Dasypus_novemcinctus
ENSSPAG00000018824	prdm12b	84	67.267	ENSEBUG00000016780	prdm12b	73	67.568	Eptatretus_burgeri
ENSSPAG00000018824	prdm12b	94	79.272	ENSEASG00005008472	PRDM12	99	76.115	Equus_asinus_asinus
ENSSPAG00000018824	prdm12b	94	79.272	ENSECAG00000005933	PRDM12	99	76.115	Equus_caballus
ENSSPAG00000018824	prdm12b	100	82.677	ENSELUG00000009905	prdm12b	100	82.677	Esox_lucius
ENSSPAG00000018824	prdm12b	100	83.770	ENSELUG00000013674	PRDM12	100	83.727	Esox_lucius
ENSSPAG00000018824	prdm12b	90	81.871	ENSFCAG00000043086	PRDM12	99	76.115	Felis_catus
ENSSPAG00000018824	prdm12b	100	77.953	ENSFALG00000001445	PRDM12	89	76.903	Ficedula_albicollis
ENSSPAG00000018824	prdm12b	100	75.622	ENSFHEG00000007746	-	100	75.439	Fundulus_heteroclitus
ENSSPAG00000018824	prdm12b	100	88.391	ENSFHEG00000003944	prdm12b	100	87.173	Fundulus_heteroclitus
ENSSPAG00000018824	prdm12b	100	82.383	ENSGMOG00000011797	prdm12b	100	81.039	Gadus_morhua
ENSSPAG00000018824	prdm12b	100	77.953	ENSGALG00000003895	PRDM12	99	76.903	Gallus_gallus
ENSSPAG00000018824	prdm12b	100	89.005	ENSGAFG00000010827	prdm12b	99	89.005	Gambusia_affinis
ENSSPAG00000018824	prdm12b	100	89.295	ENSGACG00000016713	prdm12b	99	87.728	Gasterosteus_aculeatus
ENSSPAG00000018824	prdm12b	100	78.740	ENSGAGG00000014083	PRDM12	99	77.690	Gopherus_agassizii
ENSSPAG00000018824	prdm12b	90	81.579	ENSGGOG00000010568	PRDM12	99	74.935	Gorilla_gorilla
ENSSPAG00000018824	prdm12b	100	76.368	ENSHBUG00000022537	-	93	77.363	Haplochromis_burtoni
ENSSPAG00000018824	prdm12b	100	92.857	ENSHBUG00000022878	prdm12b	100	91.799	Haplochromis_burtoni
ENSSPAG00000018824	prdm12b	90	81.871	ENSHGLG00000013939	PRDM12	99	75.131	Heterocephalus_glaber_female
ENSSPAG00000018824	prdm12b	90	88.150	ENSHCOG00000003663	prdm12b	100	79.093	Hippocampus_comes
ENSSPAG00000018824	prdm12b	100	71.540	ENSHCOG00000021167	-	100	70.496	Hippocampus_comes
ENSSPAG00000018824	prdm12b	100	77.778	ENSIPUG00000019544	PRDM12	100	76.720	Ictalurus_punctatus
ENSSPAG00000018824	prdm12b	100	83.727	ENSIPUG00000017053	prdm12b	100	83.465	Ictalurus_punctatus
ENSSPAG00000018824	prdm12b	94	79.050	ENSSTOG00000005986	PRDM12	85	81.871	Ictidomys_tridecemlineatus
ENSSPAG00000018824	prdm12b	90	82.164	ENSJJAG00000005424	Prdm12	98	81.871	Jaculus_jaculus
ENSSPAG00000018824	prdm12b	94	78.212	ENSKMAG00000021205	-	94	77.686	Kryptolebias_marmoratus
ENSSPAG00000018824	prdm12b	100	83.251	ENSKMAG00000016921	prdm12b	100	85.714	Kryptolebias_marmoratus
ENSSPAG00000018824	prdm12b	100	79.427	ENSLBEG00000007776	-	100	80.208	Labrus_bergylta
ENSSPAG00000018824	prdm12b	100	88.601	ENSLBEG00000017769	prdm12b	100	88.601	Labrus_bergylta
ENSSPAG00000018824	prdm12b	100	78.158	ENSLACG00000017560	PRDM12	99	77.368	Latimeria_chalumnae
ENSSPAG00000018824	prdm12b	100	81.771	ENSLOCG00000005429	prdm12b	100	82.292	Lepisosteus_oculatus
ENSSPAG00000018824	prdm12b	90	82.596	ENSLAFG00000006979	PRDM12	88	80.460	Loxodonta_africana
ENSSPAG00000018824	prdm12b	100	75.000	ENSMFAG00000040322	PRDM12	99	75.000	Macaca_fascicularis
ENSSPAG00000018824	prdm12b	90	81.871	ENSMNEG00000037234	PRDM12	99	75.591	Macaca_nemestrina
ENSSPAG00000018824	prdm12b	100	74.129	ENSMAMG00000018988	-	100	74.627	Mastacembelus_armatus
ENSSPAG00000018824	prdm12b	100	91.906	ENSMAMG00000013212	prdm12b	100	90.078	Mastacembelus_armatus
ENSSPAG00000018824	prdm12b	100	75.990	ENSMZEG00005000415	PRDM12	100	77.228	Maylandia_zebra
ENSSPAG00000018824	prdm12b	94	79.666	ENSMGAG00000005438	PRDM12	91	82.164	Meleagris_gallopavo
ENSSPAG00000018824	prdm12b	100	75.916	ENSMAUG00000013040	Prdm12	99	75.654	Mesocricetus_auratus
ENSSPAG00000018824	prdm12b	93	79.437	ENSMICG00000015480	PRDM12	99	75.853	Microcebus_murinus
ENSSPAG00000018824	prdm12b	99	76.393	ENSMOCG00000021026	Prdm12	89	82.164	Microtus_ochrogaster
ENSSPAG00000018824	prdm12b	100	77.953	ENSMODG00000012108	PRDM12	99	77.225	Monodelphis_domestica
ENSSPAG00000018824	prdm12b	100	75.457	ENSMALG00000021901	prdm12b	99	73.890	Monopterus_albus
ENSSPAG00000018824	prdm12b	90	81.871	MGP_CAROLIEiJ_G0023414	Prdm12	99	75.916	Mus_caroli
ENSSPAG00000018824	prdm12b	90	81.871	ENSMUSG00000079466	Prdm12	99	75.916	Mus_musculus
ENSSPAG00000018824	prdm12b	90	81.871	MGP_PahariEiJ_G0024871	Prdm12	99	75.916	Mus_pahari
ENSSPAG00000018824	prdm12b	90	81.871	MGP_SPRETEiJ_G0024331	Prdm12	99	75.916	Mus_spretus
ENSSPAG00000018824	prdm12b	90	81.871	ENSNGAG00000018480	Prdm12	99	75.591	Nannospalax_galili
ENSSPAG00000018824	prdm12b	100	94.444	ENSNBRG00000006727	prdm12b	100	93.386	Neolamprologus_brichardi
ENSSPAG00000018824	prdm12b	100	72.021	ENSNBRG00000024312	-	100	72.798	Neolamprologus_brichardi
ENSSPAG00000018824	prdm12b	100	70.000	ENSMEUG00000003828	PRDM12	99	69.291	Notamacropus_eugenii
ENSSPAG00000018824	prdm12b	90	81.579	ENSOPRG00000008680	PRDM12	98	81.579	Ochotona_princeps
ENSSPAG00000018824	prdm12b	94	79.272	ENSODEG00000016282	PRDM12	61	81.579	Octodon_degus
ENSSPAG00000018824	prdm12b	63	75.309	ENSOANG00000001043	PRDM12	100	74.486	Ornithorhynchus_anatinus
ENSSPAG00000018824	prdm12b	88	77.976	ENSOCUG00000008241	PRDM12	96	81.073	Oryctolagus_cuniculus
ENSSPAG00000018824	prdm12b	100	78.680	ENSORLG00000017558	-	100	77.919	Oryzias_latipes
ENSSPAG00000018824	prdm12b	100	88.743	ENSORLG00000007114	prdm12b	99	88.189	Oryzias_latipes
ENSSPAG00000018824	prdm12b	100	88.714	ENSORLG00020019565	prdm12b	99	88.714	Oryzias_latipes_hni
ENSSPAG00000018824	prdm12b	100	78.934	ENSORLG00020013167	-	100	78.173	Oryzias_latipes_hni
ENSSPAG00000018824	prdm12b	100	88.451	ENSORLG00015007621	prdm12b	99	88.451	Oryzias_latipes_hsok
ENSSPAG00000018824	prdm12b	100	79.241	ENSORLG00015003435	-	100	78.481	Oryzias_latipes_hsok
ENSSPAG00000018824	prdm12b	100	78.446	ENSOMEG00000007762	-	100	78.697	Oryzias_melastigma
ENSSPAG00000018824	prdm12b	100	89.583	ENSOMEG00000004134	prdm12b	99	89.295	Oryzias_melastigma
ENSSPAG00000018824	prdm12b	90	81.871	ENSOGAG00000007557	PRDM12	97	81.871	Otolemur_garnettii
ENSSPAG00000018824	prdm12b	80	79.605	ENSPPAG00000031506	-	99	77.742	Pan_paniscus
ENSSPAG00000018824	prdm12b	98	70.777	ENSPPRG00000023024	PRDM12	91	70.777	Panthera_pardus
ENSSPAG00000018824	prdm12b	90	81.871	ENSPTRG00000021475	PRDM12	99	75.196	Pan_troglodytes
ENSSPAG00000018824	prdm12b	90	81.871	ENSPTRG00000043324	-	99	75.196	Pan_troglodytes
ENSSPAG00000018824	prdm12b	90	81.871	ENSPANG00000025967	PRDM12	99	75.591	Papio_anubis
ENSSPAG00000018824	prdm12b	90	80.826	ENSPKIG00000004305	PRDM12	94	80.826	Paramormyrops_kingsleyae
ENSSPAG00000018824	prdm12b	100	82.677	ENSPKIG00000007228	prdm12b	100	83.202	Paramormyrops_kingsleyae
ENSSPAG00000018824	prdm12b	100	78.478	ENSPSIG00000006739	PRDM12	99	77.428	Pelodiscus_sinensis
ENSSPAG00000018824	prdm12b	100	74.242	ENSPMGG00000002356	-	100	73.737	Periophthalmus_magnuspinnatus
ENSSPAG00000018824	prdm12b	100	88.889	ENSPMGG00000008867	prdm12b	99	88.889	Periophthalmus_magnuspinnatus
ENSSPAG00000018824	prdm12b	96	77.628	ENSPEMG00000009969	Prdm12	91	80.342	Peromyscus_maniculatus_bairdii
ENSSPAG00000018824	prdm12b	100	77.953	ENSPCIG00000024119	PRDM12	99	77.225	Phascolarctos_cinereus
ENSSPAG00000018824	prdm12b	100	87.728	ENSPFOG00000019841	prdm12b	100	86.945	Poecilia_formosa
ENSSPAG00000018824	prdm12b	100	88.312	ENSPLAG00000016626	prdm12b	99	88.312	Poecilia_latipinna
ENSSPAG00000018824	prdm12b	96	88.410	ENSPMEG00000016698	prdm12b	99	88.410	Poecilia_mexicana
ENSSPAG00000018824	prdm12b	95	73.370	ENSPREG00000003211	-	94	73.098	Poecilia_reticulata
ENSSPAG00000018824	prdm12b	100	88.083	ENSPREG00000015073	prdm12b	99	87.824	Poecilia_reticulata
ENSSPAG00000018824	prdm12b	94	79.552	ENSPPYG00000019694	PRDM12	92	81.287	Pongo_abelii
ENSSPAG00000018824	prdm12b	90	81.871	ENSPCOG00000022255	PRDM12	99	75.979	Propithecus_coquereli
ENSSPAG00000018824	prdm12b	90	81.871	ENSPVAG00000001511	PRDM12	99	75.718	Pteropus_vampyrus
ENSSPAG00000018824	prdm12b	100	75.990	ENSPNYG00000013589	-	100	77.228	Pundamilia_nyererei
ENSSPAG00000018824	prdm12b	100	93.651	ENSPNYG00000009607	prdm12b	100	92.857	Pundamilia_nyererei
ENSSPAG00000018824	prdm12b	100	78.906	ENSPNAG00000013396	PRDM12	100	78.906	Pygocentrus_nattereri
ENSSPAG00000018824	prdm12b	100	82.677	ENSPNAG00000024532	prdm12b	100	82.677	Pygocentrus_nattereri
ENSSPAG00000018824	prdm12b	90	81.871	ENSRNOG00000009218	Prdm12	99	75.916	Rattus_norvegicus
ENSSPAG00000018824	prdm12b	88	81.737	ENSRBIG00000042712	PRDM12	88	80.473	Rhinopithecus_bieti
ENSSPAG00000018824	prdm12b	89	81.953	ENSRROG00000043554	PRDM12	99	81.361	Rhinopithecus_roxellana
ENSSPAG00000018824	prdm12b	100	77.487	ENSSHAG00000015972	PRDM12	99	76.762	Sarcophilus_harrisii
ENSSPAG00000018824	prdm12b	100	87.404	ENSSMAG00000003754	prdm12b	100	86.735	Scophthalmus_maximus
ENSSPAG00000018824	prdm12b	100	93.229	ENSSDUG00000023498	prdm12b	100	92.448	Seriola_dumerili
ENSSPAG00000018824	prdm12b	100	81.088	ENSSDUG00000019071	-	100	81.347	Seriola_dumerili
ENSSPAG00000018824	prdm12b	100	92.708	ENSSLDG00000009557	prdm12b	100	91.667	Seriola_lalandi_dorsalis
ENSSPAG00000018824	prdm12b	100	76.842	ENSSLDG00000013562	-	100	76.378	Seriola_lalandi_dorsalis
ENSSPAG00000018824	prdm12b	100	78.421	ENSSPUG00000013424	PRDM12	99	77.105	Sphenodon_punctatus
ENSSPAG00000018824	prdm12b	90	81.871	ENSSSCG00000005703	PRDM12	99	76.115	Sus_scrofa
ENSSPAG00000018824	prdm12b	100	86.579	ENSTRUG00000018659	prdm12b	100	86.579	Takifugu_rubripes
ENSSPAG00000018824	prdm12b	100	76.963	ENSTRUG00000013239	-	100	76.702	Takifugu_rubripes
ENSSPAG00000018824	prdm12b	100	74.803	ENSTNIG00000005859	-	99	74.541	Tetraodon_nigroviridis
ENSSPAG00000018824	prdm12b	100	86.842	ENSTNIG00000009020	prdm12b	99	85.526	Tetraodon_nigroviridis
ENSSPAG00000018824	prdm12b	90	81.871	ENSUAMG00000009653	PRDM12	90	81.871	Ursus_americanus
ENSSPAG00000018824	prdm12b	90	81.871	ENSVVUG00000027662	PRDM12	77	81.871	Vulpes_vulpes
ENSSPAG00000018824	prdm12b	100	89.737	ENSXCOG00000002836	prdm12b	99	88.947	Xiphophorus_couchianus
ENSSPAG00000018824	prdm12b	100	76.543	ENSXMAG00000028012	-	100	77.114	Xiphophorus_maculatus
ENSSPAG00000018824	prdm12b	100	88.512	ENSXMAG00000005537	prdm12b	100	87.728	Xiphophorus_maculatus