EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000018854 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: -
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 1726 bases
Position: chrKK581558.1:23260-24985
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000024953	FDF	PF09532.10	3.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000025363	-	777	-	ENSSPAP00000024953	258 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000018854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000018854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000018854	-	87	38.596	ENSSPAG00000020915	lsm14b	64	40.316

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000018854	-	88	38.462	ENSG00000149657	LSM14B	98	31.967	Homo_sapiens
ENSSPAG00000018854	-	86	38.934	ENSAPOG00000001780	lsm14b	66	40.741	Acanthochromis_polyacanthus
ENSSPAG00000018854	-	88	37.455	ENSAMEG00000013430	LSM14B	68	38.832	Ailuropoda_melanoleuca
ENSSPAG00000018854	-	90	47.325	ENSACIG00000003147	LSM14B	97	49.612	Amphilophus_citrinellus
ENSSPAG00000018854	-	87	38.627	ENSACIG00000012266	lsm14b	63	41.434	Amphilophus_citrinellus
ENSSPAG00000018854	-	100	60.490	ENSAOCG00000006667	LSM14B	70	60.490	Amphiprion_ocellaris
ENSSPAG00000018854	-	86	38.934	ENSAOCG00000012380	lsm14b	66	40.741	Amphiprion_ocellaris
ENSSPAG00000018854	-	87	39.565	ENSAPEG00000023633	lsm14b	65	41.176	Amphiprion_percula
ENSSPAG00000018854	-	100	47.419	ENSATEG00000015895	LSM14B	91	48.693	Anabas_testudineus
ENSSPAG00000018854	-	86	39.316	ENSATEG00000016603	lsm14b	66	40.377	Anabas_testudineus
ENSSPAG00000018854	-	88	35.357	ENSAPLG00000013203	LSM14B	75	37.075	Anas_platyrhynchos
ENSSPAG00000018854	-	88	33.083	ENSACAG00000016195	LSM14B	68	38.710	Anolis_carolinensis
ENSSPAG00000018854	-	88	39.271	ENSANAG00000037915	LSM14B	65	40.304	Aotus_nancymaae
ENSSPAG00000018854	-	82	40.161	ENSACLG00000011955	-	83	40.964	Astatotilapia_calliptera
ENSSPAG00000018854	-	53	53.846	ENSACLG00000013004	-	50	53.846	Astatotilapia_calliptera
ENSSPAG00000018854	-	82	37.445	ENSACLG00000008384	-	81	38.115	Astatotilapia_calliptera
ENSSPAG00000018854	-	82	41.767	ENSACLG00000019624	-	84	42.213	Astatotilapia_calliptera
ENSSPAG00000018854	-	86	32.114	ENSACLG00000019663	lsm14b	66	38.235	Astatotilapia_calliptera
ENSSPAG00000018854	-	86	39.844	ENSAMXG00000002865	lsm14b	68	42.705	Astyanax_mexicanus
ENSSPAG00000018854	-	88	35.036	ENSBTAG00000021558	LSM14B	68	37.329	Bos_taurus
ENSSPAG00000018854	-	88	38.866	ENSCJAG00000014434	LSM14B	65	39.924	Callithrix_jacchus
ENSSPAG00000018854	-	88	36.000	ENSCAFG00000012518	LSM14B	74	37.457	Canis_familiaris
ENSSPAG00000018854	-	88	39.919	ENSCAFG00020022150	LSM14B	65	41.288	Canis_lupus_dingo
ENSSPAG00000018854	-	97	32.824	ENSCHIG00000022681	-	70	33.460	Capra_hircus
ENSSPAG00000018854	-	88	38.057	ENSCHIG00000010284	-	65	39.773	Capra_hircus
ENSSPAG00000018854	-	88	37.450	ENSTSYG00000031914	LSM14B	65	38.577	Carlito_syrichta
ENSSPAG00000018854	-	88	39.271	ENSCAPG00000013059	LSM14B	95	37.329	Cavia_aperea
ENSSPAG00000018854	-	88	39.271	ENSCPOG00000038080	LSM14B	95	37.329	Cavia_porcellus
ENSSPAG00000018854	-	76	35.514	ENSCCAG00000024900	-	72	36.323	Cebus_capucinus
ENSSPAG00000018854	-	88	38.462	ENSCCAG00000021267	LSM14B	66	39.098	Cebus_capucinus
ENSSPAG00000018854	-	88	38.462	ENSCATG00000036006	LSM14B	65	39.544	Cercocebus_atys
ENSSPAG00000018854	-	88	40.323	ENSCLAG00000003186	LSM14B	95	38.225	Chinchilla_lanigera
ENSSPAG00000018854	-	88	34.672	ENSCSAG00000015729	LSM14B	68	36.207	Chlorocebus_sabaeus
ENSSPAG00000018854	-	88	32.639	ENSCPBG00000027065	LSM14B	69	36.824	Chrysemys_picta_bellii
ENSSPAG00000018854	-	88	38.462	ENSCANG00000036986	LSM14B	73	39.544	Colobus_angolensis_palliatus
ENSSPAG00000018854	-	88	40.891	ENSCGRG00001018399	Lsm14b	95	38.276	Cricetulus_griseus_chok1gshd
ENSSPAG00000018854	-	88	36.496	ENSCGRG00000006111	-	97	38.276	Cricetulus_griseus_crigri
ENSSPAG00000018854	-	74	35.266	ENSCGRG00000002484	-	94	36.283	Cricetulus_griseus_crigri
ENSSPAG00000018854	-	85	36.546	ENSCSEG00000004722	lsm14b	66	37.906	Cynoglossus_semilaevis
ENSSPAG00000018854	-	99	44.014	ENSCSEG00000020669	LSM14B	69	45.965	Cynoglossus_semilaevis
ENSSPAG00000018854	-	95	47.012	ENSCVAG00000012433	-	97	47.012	Cyprinodon_variegatus
ENSSPAG00000018854	-	88	38.247	ENSDARG00000025386	lsm14b	68	43.116	Danio_rerio
ENSSPAG00000018854	-	88	35.766	ENSDNOG00000025246	LSM14B	96	37.884	Dasypus_novemcinctus
ENSSPAG00000018854	-	88	41.296	ENSDORG00000016683	Lsm14b	100	38.235	Dipodomys_ordii
ENSSPAG00000018854	-	90	34.677	ENSETEG00000001869	-	68	35.294	Echinops_telfairi
ENSSPAG00000018854	-	61	39.877	ENSETEG00000011188	-	68	39.053	Echinops_telfairi
ENSSPAG00000018854	-	88	36.437	ENSEASG00005023218	LSM14B	95	37.037	Equus_asinus_asinus
ENSSPAG00000018854	-	88	39.370	ENSECAG00000010659	LSM14B	65	40.741	Equus_caballus
ENSSPAG00000018854	-	95	40.377	ENSELUG00000005780	lsm14b	67	40.217	Esox_lucius
ENSSPAG00000018854	-	86	42.562	ENSELUG00000016299	LSM14B	66	44.906	Esox_lucius
ENSSPAG00000018854	-	88	40.323	ENSFCAG00000003248	LSM14B	65	41.667	Felis_catus
ENSSPAG00000018854	-	88	35.943	ENSFALG00000010618	LSM14B	76	37.627	Ficedula_albicollis
ENSSPAG00000018854	-	88	38.866	ENSFDAG00000002214	LSM14B	95	36.897	Fukomys_damarensis
ENSSPAG00000018854	-	88	34.646	ENSFHEG00000006237	lsm14b	65	35.165	Fundulus_heteroclitus
ENSSPAG00000018854	-	100	37.209	ENSGMOG00000017115	lsm14b	65	38.372	Gadus_morhua
ENSSPAG00000018854	-	88	37.008	ENSGALG00000005125	LSM14B	67	40.441	Gallus_gallus
ENSSPAG00000018854	-	95	46.988	ENSGAFG00000013723	LSM14B	96	46.988	Gambusia_affinis
ENSSPAG00000018854	-	97	32.967	ENSGAFG00000020318	lsm14b	67	33.818	Gambusia_affinis
ENSSPAG00000018854	-	88	37.549	ENSGACG00000009973	lsm14b	66	38.971	Gasterosteus_aculeatus
ENSSPAG00000018854	-	77	33.668	ENSGAGG00000004106	LSM14B	91	37.553	Gopherus_agassizii
ENSSPAG00000018854	-	88	38.462	ENSGGOG00000005630	LSM14B	95	36.207	Gorilla_gorilla
ENSSPAG00000018854	-	88	38.866	ENSHGLG00000015055	LSM14B	95	36.552	Heterocephalus_glaber_female
ENSSPAG00000018854	-	87	38.367	ENSHGLG00100015273	LSM14B	95	36.237	Heterocephalus_glaber_male
ENSSPAG00000018854	-	89	38.865	ENSHCOG00000004867	lsm14b	100	39.147	Hippocampus_comes
ENSSPAG00000018854	-	100	46.429	ENSHCOG00000018747	LSM14B	71	46.429	Hippocampus_comes
ENSSPAG00000018854	-	86	40.486	ENSIPUG00000014946	lsm14b	63	43.333	Ictalurus_punctatus
ENSSPAG00000018854	-	88	39.271	ENSSTOG00000020482	LSM14B	95	36.897	Ictidomys_tridecemlineatus
ENSSPAG00000018854	-	88	40.891	ENSJJAG00000012728	Lsm14b	95	38.276	Jaculus_jaculus
ENSSPAG00000018854	-	86	33.735	ENSKMAG00000017524	lsm14b	64	36.466	Kryptolebias_marmoratus
ENSSPAG00000018854	-	70	49.754	ENSKMAG00000012834	-	98	51.982	Kryptolebias_marmoratus
ENSSPAG00000018854	-	100	46.468	ENSLBEG00000007951	LSM14B	100	46.840	Labrus_bergylta
ENSSPAG00000018854	-	89	37.589	ENSLACG00000003849	LSM14B	69	38.851	Latimeria_chalumnae
ENSSPAG00000018854	-	87	40.400	ENSLOCG00000003746	lsm14b	72	43.431	Lepisosteus_oculatus
ENSSPAG00000018854	-	88	36.255	ENSLAFG00000007492	LSM14B	73	37.778	Loxodonta_africana
ENSSPAG00000018854	-	88	38.462	ENSMFAG00000041479	LSM14B	65	39.544	Macaca_fascicularis
ENSSPAG00000018854	-	88	38.462	ENSMMUG00000014084	LSM14B	65	39.544	Macaca_mulatta
ENSSPAG00000018854	-	88	38.462	ENSMNEG00000045573	LSM14B	65	39.544	Macaca_nemestrina
ENSSPAG00000018854	-	88	38.462	ENSMLEG00000040895	LSM14B	73	39.544	Mandrillus_leucophaeus
ENSSPAG00000018854	-	100	52.536	ENSMAMG00000024124	LSM14B	69	52.536	Mastacembelus_armatus
ENSSPAG00000018854	-	87	36.992	ENSMAMG00000020539	lsm14b	69	39.502	Mastacembelus_armatus
ENSSPAG00000018854	-	89	46.947	ENSMZEG00005026001	LSM14B	70	50.714	Maylandia_zebra
ENSSPAG00000018854	-	82	36.123	ENSMZEG00005002688	-	83	36.885	Maylandia_zebra
ENSSPAG00000018854	-	86	32.520	ENSMZEG00005000987	lsm14b	66	38.603	Maylandia_zebra
ENSSPAG00000018854	-	82	36.123	ENSMZEG00005026087	-	83	36.885	Maylandia_zebra
ENSSPAG00000018854	-	88	35.115	ENSMGAG00000005300	LSM14B	72	39.785	Meleagris_gallopavo
ENSSPAG00000018854	-	88	40.081	ENSMAUG00000020700	Lsm14b	95	37.586	Mesocricetus_auratus
ENSSPAG00000018854	-	88	39.676	ENSMICG00000014675	LSM14B	65	40.909	Microcebus_murinus
ENSSPAG00000018854	-	88	38.866	ENSMOCG00000020600	Lsm14b	95	36.552	Microtus_ochrogaster
ENSSPAG00000018854	-	89	31.086	ENSMOCG00000005119	-	93	31.086	Microtus_ochrogaster
ENSSPAG00000018854	-	88	45.570	ENSMMOG00000017321	LSM14B	67	47.015	Mola_mola
ENSSPAG00000018854	-	86	37.143	ENSMMOG00000020042	lsm14b	68	38.889	Mola_mola
ENSSPAG00000018854	-	88	35.612	ENSMODG00000016690	LSM14B	95	37.838	Monodelphis_domestica
ENSSPAG00000018854	-	97	39.080	ENSMALG00000004783	lsm14b	65	39.080	Monopterus_albus
ENSSPAG00000018854	-	99	51.246	ENSMALG00000022251	LSM14B	69	52.313	Monopterus_albus
ENSSPAG00000018854	-	88	40.891	MGP_CAROLIEiJ_G0024770	Lsm14b	65	41.825	Mus_caroli
ENSSPAG00000018854	-	88	40.891	ENSMUSG00000039108	Lsm14b	95	38.276	Mus_musculus
ENSSPAG00000018854	-	88	40.891	MGP_PahariEiJ_G0026214	Lsm14b	65	41.825	Mus_pahari
ENSSPAG00000018854	-	88	40.891	MGP_SPRETEiJ_G0025693	Lsm14b	65	41.825	Mus_spretus
ENSSPAG00000018854	-	88	37.091	ENSMPUG00000007584	LSM14B	72	38.488	Mustela_putorius_furo
ENSSPAG00000018854	-	86	37.860	ENSMLUG00000000304	LSM14B	65	39.773	Myotis_lucifugus
ENSSPAG00000018854	-	72	39.806	ENSNGAG00000016550	Lsm14b	94	40.639	Nannospalax_galili
ENSSPAG00000018854	-	88	38.462	ENSNLEG00000015757	LSM14B	73	39.544	Nomascus_leucogenys
ENSSPAG00000018854	-	88	39.676	ENSODEG00000004099	LSM14B	95	37.241	Octodon_degus
ENSSPAG00000018854	-	87	35.878	ENSONIG00000020318	lsm14b	68	38.516	Oreochromis_niloticus
ENSSPAG00000018854	-	61	41.818	ENSOANG00000003370	LSM14B	50	41.818	Ornithorhynchus_anatinus
ENSSPAG00000018854	-	88	36.437	ENSOCUG00000006279	LSM14B	74	37.594	Oryctolagus_cuniculus
ENSSPAG00000018854	-	90	46.484	ENSORLG00000028353	LSM14B	69	47.312	Oryzias_latipes
ENSSPAG00000018854	-	86	32.389	ENSORLG00000013525	lsm14b	62	36.965	Oryzias_latipes
ENSSPAG00000018854	-	86	34.568	ENSORLG00020020553	lsm14b	62	37.008	Oryzias_latipes_hni
ENSSPAG00000018854	-	90	47.541	ENSORLG00020018191	-	98	49.259	Oryzias_latipes_hni
ENSSPAG00000018854	-	86	34.568	ENSORLG00015016862	lsm14b	62	37.008	Oryzias_latipes_hsok
ENSSPAG00000018854	-	90	46.245	ENSORLG00015013157	LSM14B	69	47.312	Oryzias_latipes_hsok
ENSSPAG00000018854	-	94	41.463	ENSOMEG00000000171	-	95	43.969	Oryzias_melastigma
ENSSPAG00000018854	-	88	34.307	ENSOGAG00000003915	LSM14B	68	36.426	Otolemur_garnettii
ENSSPAG00000018854	-	88	35.636	ENSOARG00000014706	LSM14B	74	37.329	Ovis_aries
ENSSPAG00000018854	-	88	38.462	ENSPPAG00000035799	LSM14B	68	39.544	Pan_paniscus
ENSSPAG00000018854	-	88	40.323	ENSPPRG00000009197	LSM14B	65	41.667	Panthera_pardus
ENSSPAG00000018854	-	88	37.344	ENSPTIG00000021518	LSM14B	97	38.911	Panthera_tigris_altaica
ENSSPAG00000018854	-	88	38.462	ENSPTRG00000013696	LSM14B	65	39.544	Pan_troglodytes
ENSSPAG00000018854	-	88	38.462	ENSPANG00000011747	LSM14B	65	39.544	Papio_anubis
ENSSPAG00000018854	-	88	40.083	ENSPKIG00000003275	lsm14b	65	43.462	Paramormyrops_kingsleyae
ENSSPAG00000018854	-	88	38.492	ENSPSIG00000014762	LSM14B	96	36.519	Pelodiscus_sinensis
ENSSPAG00000018854	-	88	40.891	ENSPEMG00000017688	Lsm14b	95	38.276	Peromyscus_maniculatus_bairdii
ENSSPAG00000018854	-	88	39.683	ENSPCIG00000013405	LSM14B	66	40.959	Phascolarctos_cinereus
ENSSPAG00000018854	-	97	35.662	ENSPFOG00000005631	lsm14b	68	35.484	Poecilia_formosa
ENSSPAG00000018854	-	86	45.082	ENSPLAG00000005793	LSM14B	68	46.209	Poecilia_latipinna
ENSSPAG00000018854	-	97	35.662	ENSPLAG00000002449	lsm14b	67	35.662	Poecilia_latipinna
ENSSPAG00000018854	-	85	44.715	ENSPMEG00000022953	LSM14B	68	47.163	Poecilia_mexicana
ENSSPAG00000018854	-	97	35.793	ENSPMEG00000000745	lsm14b	67	36.264	Poecilia_mexicana
ENSSPAG00000018854	-	99	49.815	ENSPREG00000007828	LSM14B	98	50.187	Poecilia_reticulata
ENSSPAG00000018854	-	88	40.486	ENSPCOG00000013625	LSM14B	65	41.667	Propithecus_coquereli
ENSSPAG00000018854	-	87	39.442	ENSPNAG00000012777	lsm14b	66	42.125	Pygocentrus_nattereri
ENSSPAG00000018854	-	88	36.131	ENSRNOG00000054557	Lsm14b	68	37.931	Rattus_norvegicus
ENSSPAG00000018854	-	88	38.462	ENSRBIG00000033461	LSM14B	72	39.544	Rhinopithecus_bieti
ENSSPAG00000018854	-	88	38.462	ENSRROG00000042949	LSM14B	95	36.207	Rhinopithecus_roxellana
ENSSPAG00000018854	-	88	38.866	ENSSBOG00000032820	LSM14B	95	34.641	Saimiri_boliviensis_boliviensis
ENSSPAG00000018854	-	88	34.483	ENSSHAG00000015528	LSM14B	95	37.037	Sarcophilus_harrisii
ENSSPAG00000018854	-	86	39.834	ENSSFOG00015004627	lsm14b	67	42.966	Scleropages_formosus
ENSSPAG00000018854	-	100	54.386	ENSSMAG00000000135	LSM14B	70	54.386	Scophthalmus_maximus
ENSSPAG00000018854	-	86	36.255	ENSSMAG00000012725	lsm14b	65	38.321	Scophthalmus_maximus
ENSSPAG00000018854	-	86	38.956	ENSSDUG00000020977	lsm14b	66	41.176	Seriola_dumerili
ENSSPAG00000018854	-	100	51.957	ENSSDUG00000022770	LSM14B	70	56.890	Seriola_dumerili
ENSSPAG00000018854	-	100	52.797	ENSSLDG00000011354	-	100	58.696	Seriola_lalandi_dorsalis
ENSSPAG00000018854	-	71	35.211	ENSSARG00000007749	-	99	35.211	Sorex_araneus
ENSSPAG00000018854	-	88	32.203	ENSSPUG00000014360	LSM14B	70	36.877	Sphenodon_punctatus
ENSSPAG00000018854	-	88	37.652	ENSSSCG00000026052	LSM14B	96	35.836	Sus_scrofa
ENSSPAG00000018854	-	88	40.157	ENSTGUG00000007884	LSM14B	74	41.636	Taeniopygia_guttata
ENSSPAG00000018854	-	100	47.535	ENSTRUG00000001529	LSM14B	69	47.535	Takifugu_rubripes
ENSSPAG00000018854	-	95	36.923	ENSTRUG00000011354	lsm14b	64	36.923	Takifugu_rubripes
ENSSPAG00000018854	-	88	37.698	ENSTNIG00000002445	lsm14b	65	38.235	Tetraodon_nigroviridis
ENSSPAG00000018854	-	88	34.568	ENSTTRG00000011043	LSM14B	66	36.567	Tursiops_truncatus
ENSSPAG00000018854	-	88	41.532	ENSUAMG00000025298	LSM14B	66	42.803	Ursus_americanus
ENSSPAG00000018854	-	88	41.532	ENSUMAG00000000480	LSM14B	66	42.803	Ursus_maritimus
ENSSPAG00000018854	-	88	39.919	ENSVVUG00000015920	LSM14B	95	37.457	Vulpes_vulpes
ENSSPAG00000018854	-	61	40.113	ENSXETG00000001997	lsm14b	52	35.784	Xenopus_tropicalis
ENSSPAG00000018854	-	97	37.407	ENSXMAG00000010013	lsm14b	67	37.868	Xiphophorus_maculatus