EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000019046 (Gene tree)
Gene ID: 103359712
Gene Symbol: -
Alias: rbm4l|wu:fc25a01
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 7079 bases
Position: chrKK580461.1:392681-399759
Accession: 103359712
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000025188	zf-CCHC	PF00098.23	7.9e-06	1	1
ENSSPAP00000025188	RRM_5	PF13893.6	1.1e-08	1	1
ENSSPAP00000025188	RRM_1	PF00076.22	3.6e-31	1	2
ENSSPAP00000025188	RRM_1	PF00076.22	3.6e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000025601	-	4518	XM_008285200	ENSSPAP00000025188	383 (aa)	XP_008283422	UPI0004966B1E

Gene Model

Click here to download ENSSPAG00000019046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000019046's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000019046	-	99	45.602	ENSSPAG00000019053	rbm4.1	99	48.104
ENSSPAG00000019046	-	68	51.634	ENSSPAG00000008041	rbm4.3	81	38.903

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000019046	-	95	47.942	ENSAPOG00000012353	rbm4.1	99	48.095	Acanthochromis_polyacanthus
ENSSPAG00000019046	-	99	45.727	ENSACIG00000016482	rbm4.1	99	48.687	Amphilophus_citrinellus
ENSSPAG00000019046	-	95	47.942	ENSAOCG00000010915	rbm4.1	95	49.380	Amphiprion_ocellaris
ENSSPAG00000019046	-	95	47.942	ENSAPEG00000009494	rbm4.1	95	49.380	Amphiprion_percula
ENSSPAG00000019046	-	99	46.279	ENSATEG00000001904	rbm4.1	99	48.571	Anabas_testudineus
ENSSPAG00000019046	-	100	76.042	ENSACLG00000007740	-	100	76.302	Astatotilapia_calliptera
ENSSPAG00000019046	-	99	46.136	ENSACLG00000007722	rbm4.1	99	48.926	Astatotilapia_calliptera
ENSSPAG00000019046	-	99	48.379	ENSAMXG00000036611	rbm4.1	99	51.429	Astyanax_mexicanus
ENSSPAG00000019046	-	94	47.739	ENSCSEG00000014365	rbm4.1	94	48.477	Cynoglossus_semilaevis
ENSSPAG00000019046	-	100	70.256	ENSCSEG00000014359	-	100	70.513	Cynoglossus_semilaevis
ENSSPAG00000019046	-	99	45.933	ENSCVAG00000019349	rbm4.1	99	47.115	Cyprinodon_variegatus
ENSSPAG00000019046	-	99	50.388	ENSDARG00000055080	rbm4.2	99	54.847	Danio_rerio
ENSSPAG00000019046	-	99	48.585	ENSDARG00000036386	rbm4.1	99	48.712	Danio_rerio
ENSSPAG00000019046	-	99	49.763	ENSELUG00000013205	rbm4.1	99	50.000	Esox_lucius
ENSSPAG00000019046	-	94	47.407	ENSFHEG00000022926	rbm4.1	99	45.991	Fundulus_heteroclitus
ENSSPAG00000019046	-	99	43.437	ENSGMOG00000007464	rbm4.1	99	44.262	Gadus_morhua
ENSSPAG00000019046	-	100	66.067	ENSGMOG00000007455	-	100	68.798	Gadus_morhua
ENSSPAG00000019046	-	99	46.651	ENSGAFG00000019302	rbm4.1	99	47.608	Gambusia_affinis
ENSSPAG00000019046	-	100	75.457	ENSGACG00000000821	-	100	75.979	Gasterosteus_aculeatus
ENSSPAG00000019046	-	95	47.283	ENSGACG00000000822	rbm4.1	95	47.684	Gasterosteus_aculeatus
ENSSPAG00000019046	-	99	46.136	ENSHBUG00000011610	rbm4.1	99	48.926	Haplochromis_burtoni
ENSSPAG00000019046	-	96	44.417	ENSHCOG00000011403	rbm4.1	99	44.913	Hippocampus_comes
ENSSPAG00000019046	-	99	46.934	ENSIPUG00000022931	rbm4.1	99	47.897	Ictalurus_punctatus
ENSSPAG00000019046	-	93	50.674	ENSIPUG00000022937	rbm4.2	97	52.577	Ictalurus_punctatus
ENSSPAG00000019046	-	95	48.120	ENSKMAG00000006556	rbm4.1	95	49.000	Kryptolebias_marmoratus
ENSSPAG00000019046	-	100	60.934	ENSKMAG00000006528	-	100	62.654	Kryptolebias_marmoratus
ENSSPAG00000019046	-	99	45.747	ENSLBEG00000019782	rbm4.1	99	47.242	Labrus_bergylta
ENSSPAG00000019046	-	100	75.065	ENSLBEG00000019756	-	100	76.166	Labrus_bergylta
ENSSPAG00000019046	-	98	46.118	ENSMAMG00000001765	rbm4.1	98	47.962	Mastacembelus_armatus
ENSSPAG00000019046	-	100	79.275	ENSMAMG00000001760	-	100	80.570	Mastacembelus_armatus
ENSSPAG00000019046	-	55	70.952	ENSMZEG00005028158	-	69	70.952	Maylandia_zebra
ENSSPAG00000019046	-	99	46.136	ENSMZEG00005009205	rbm4.1	99	48.926	Maylandia_zebra
ENSSPAG00000019046	-	98	46.651	ENSMMOG00000020479	rbm4.1	98	46.890	Mola_mola
ENSSPAG00000019046	-	99	46.172	ENSMALG00000020544	rbm4.1	99	47.031	Monopterus_albus
ENSSPAG00000019046	-	100	82.507	ENSMALG00000020557	-	100	82.507	Monopterus_albus
ENSSPAG00000019046	-	99	46.136	ENSNBRG00000017755	rbm4.1	99	48.926	Neolamprologus_brichardi
ENSSPAG00000019046	-	99	46.154	ENSONIG00000015730	rbm4.1	99	48.926	Oreochromis_niloticus
ENSSPAG00000019046	-	100	46.429	ENSORLG00000012496	rbm4.1	100	46.429	Oryzias_latipes
ENSSPAG00000019046	-	100	46.429	ENSORLG00020012454	rbm4.1	100	46.429	Oryzias_latipes_hni
ENSSPAG00000019046	-	99	46.283	ENSORLG00015013678	rbm4.1	99	46.283	Oryzias_latipes_hsok
ENSSPAG00000019046	-	99	46.283	ENSOMEG00000001001	rbm4.1	99	46.318	Oryzias_melastigma
ENSSPAG00000019046	-	99	45.863	ENSPKIG00000020805	rbm4.1	85	65.942	Paramormyrops_kingsleyae
ENSSPAG00000019046	-	53	53.465	ENSPMAG00000003433	rbm4.2	94	53.465	Petromyzon_marinus
ENSSPAG00000019046	-	100	68.112	ENSPFOG00000012685	-	100	68.112	Poecilia_formosa
ENSSPAG00000019046	-	99	47.837	ENSPFOG00000012675	rbm4.1	99	48.210	Poecilia_formosa
ENSSPAG00000019046	-	99	47.255	ENSPLAG00000018572	rbm4.1	99	48.210	Poecilia_latipinna
ENSSPAG00000019046	-	99	47.255	ENSPMEG00000006290	rbm4.1	99	48.210	Poecilia_mexicana
ENSSPAG00000019046	-	100	64.267	ENSPREG00000003764	-	100	64.267	Poecilia_reticulata
ENSSPAG00000019046	-	99	47.255	ENSPREG00000003724	rbm4.1	99	48.210	Poecilia_reticulata
ENSSPAG00000019046	-	99	46.136	ENSPNYG00000004662	rbm4.1	99	48.926	Pundamilia_nyererei
ENSSPAG00000019046	-	99	53.181	ENSPNAG00000013057	rbm4.2	99	54.198	Pygocentrus_nattereri
ENSSPAG00000019046	-	99	50.000	ENSPNAG00000002539	rbm4.1	99	49.637	Pygocentrus_nattereri
ENSSPAG00000019046	-	98	45.708	ENSSFOG00015021996	sf1	98	48.317	Scleropages_formosus
ENSSPAG00000019046	-	99	46.890	ENSSMAG00000007571	rbm4.1	99	46.747	Scophthalmus_maximus
ENSSPAG00000019046	-	100	82.902	ENSSDUG00000003936	-	100	82.902	Seriola_dumerili
ENSSPAG00000019046	-	99	44.884	ENSSDUG00000003925	rbm4.1	99	47.143	Seriola_dumerili
ENSSPAG00000019046	-	100	80.052	ENSSLDG00000013157	-	100	81.865	Seriola_lalandi_dorsalis
ENSSPAG00000019046	-	99	44.884	ENSSLDG00000013147	rbm4.1	99	47.143	Seriola_lalandi_dorsalis
ENSSPAG00000019046	-	98	47.229	ENSTRUG00000013334	rbm4.1	98	46.359	Takifugu_rubripes
ENSSPAG00000019046	-	100	71.802	ENSTRUG00000013328	-	100	71.802	Takifugu_rubripes
ENSSPAG00000019046	-	100	72.063	ENSTNIG00000000316	-	100	72.063	Tetraodon_nigroviridis
ENSSPAG00000019046	-	95	46.216	ENSTNIG00000004821	rbm4.1	93	46.216	Tetraodon_nigroviridis
ENSSPAG00000019046	-	84	43.125	ENSXETG00000026649	rbm4b	94	42.896	Xenopus_tropicalis
ENSSPAG00000019046	-	99	47.743	ENSXCOG00000003731	rbm4.1	99	48.694	Xiphophorus_couchianus
ENSSPAG00000019046	-	99	47.743	ENSXMAG00000008069	rbm4.1	99	48.694	Xiphophorus_maculatus
ENSSPAG00000019046	-	100	67.008	ENSXMAG00000008059	-	100	67.263	Xiphophorus_maculatus