EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000019053 (Gene tree)
Gene ID: 103359711
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 4908 bases
Position: chrKK580461.1:399949-404856
Accession: 103359711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000025196	zf-CCHC	PF00098.23	4.3e-08	1	1
ENSSPAP00000025196	RRM_5	PF13893.6	1e-07	1	1
ENSSPAP00000025196	RRM_1	PF00076.22	2.3e-31	1	2
ENSSPAP00000025196	RRM_1	PF00076.22	2.3e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000025611	-	4115	XM_008285199	ENSSPAP00000025196	422 (aa)	XP_008283421	UPI0004971FAC

Gene Model

Click here to download ENSSPAG00000019053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000019053's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000019053	rbm4.1	100	56.000	ENSSPAG00000008062	rbm4.3	88	56.000
ENSSPAG00000019053	rbm4.1	99	48.104	ENSSPAG00000019046	-	99	45.602
ENSSPAG00000019053	rbm4.1	61	57.237	ENSSPAG00000008041	rbm4.3	85	57.516

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000019053	rbm4.1	100	95.498	ENSAPOG00000012353	rbm4.1	100	94.550	Acanthochromis_polyacanthus
ENSSPAG00000019053	rbm4.1	100	94.787	ENSACIG00000016482	rbm4.1	100	92.891	Amphilophus_citrinellus
ENSSPAG00000019053	rbm4.1	100	96.445	ENSAOCG00000010915	rbm4.1	100	96.445	Amphiprion_ocellaris
ENSSPAG00000019053	rbm4.1	100	96.445	ENSAPEG00000009494	rbm4.1	100	96.445	Amphiprion_percula
ENSSPAG00000019053	rbm4.1	100	94.076	ENSATEG00000001904	rbm4.1	100	92.180	Anabas_testudineus
ENSSPAG00000019053	rbm4.1	99	47.156	ENSACLG00000007740	-	99	44.213	Astatotilapia_calliptera
ENSSPAG00000019053	rbm4.1	100	92.891	ENSACLG00000007722	rbm4.1	100	90.995	Astatotilapia_calliptera
ENSSPAG00000019053	rbm4.1	100	76.540	ENSCSEG00000014365	rbm4.1	100	75.592	Cynoglossus_semilaevis
ENSSPAG00000019053	rbm4.1	100	81.043	ENSCVAG00000019349	rbm4.1	100	80.332	Cyprinodon_variegatus
ENSSPAG00000019053	rbm4.1	100	70.423	ENSDARG00000036386	rbm4.1	100	69.718	Danio_rerio
ENSSPAG00000019053	rbm4.1	100	68.160	ENSELUG00000013205	rbm4.1	100	66.979	Esox_lucius
ENSSPAG00000019053	rbm4.1	100	80.615	ENSFHEG00000022926	rbm4.1	100	78.960	Fundulus_heteroclitus
ENSSPAG00000019053	rbm4.1	92	51.515	ENSGMOG00000007455	-	96	49.169	Gadus_morhua
ENSSPAG00000019053	rbm4.1	100	69.555	ENSGMOG00000007464	rbm4.1	100	70.492	Gadus_morhua
ENSSPAG00000019053	rbm4.1	100	79.953	ENSGAFG00000019302	rbm4.1	100	78.302	Gambusia_affinis
ENSSPAG00000019053	rbm4.1	100	80.615	ENSGACG00000000822	rbm4.1	100	91.667	Gasterosteus_aculeatus
ENSSPAG00000019053	rbm4.1	97	49.157	ENSGACG00000000821	-	97	46.404	Gasterosteus_aculeatus
ENSSPAG00000019053	rbm4.1	100	92.891	ENSHBUG00000011610	rbm4.1	100	90.995	Haplochromis_burtoni
ENSSPAG00000019053	rbm4.1	96	71.078	ENSHCOG00000011403	rbm4.1	98	70.075	Hippocampus_comes
ENSSPAG00000019053	rbm4.1	100	64.155	ENSIPUG00000022931	rbm4.1	100	63.991	Ictalurus_punctatus
ENSSPAG00000019053	rbm4.1	100	49.296	ENSIPUG00000022937	rbm4.2	100	48.951	Ictalurus_punctatus
ENSSPAG00000019053	rbm4.1	100	81.132	ENSKMAG00000006556	rbm4.1	100	80.425	Kryptolebias_marmoratus
ENSSPAG00000019053	rbm4.1	100	86.493	ENSLBEG00000019782	rbm4.1	100	85.308	Labrus_bergylta
ENSSPAG00000019053	rbm4.1	99	48.585	ENSLBEG00000019756	-	90	60.256	Labrus_bergylta
ENSSPAG00000019053	rbm4.1	98	50.591	ENSMAMG00000001760	-	98	47.281	Mastacembelus_armatus
ENSSPAG00000019053	rbm4.1	100	93.839	ENSMAMG00000001765	rbm4.1	100	91.943	Mastacembelus_armatus
ENSSPAG00000019053	rbm4.1	100	92.891	ENSMZEG00005009205	rbm4.1	100	90.995	Maylandia_zebra
ENSSPAG00000019053	rbm4.1	100	89.623	ENSMMOG00000020479	rbm4.1	100	87.736	Mola_mola
ENSSPAG00000019053	rbm4.1	98	51.559	ENSMALG00000020557	-	98	48.592	Monopterus_albus
ENSSPAG00000019053	rbm4.1	100	91.706	ENSMALG00000020544	rbm4.1	100	90.047	Monopterus_albus
ENSSPAG00000019053	rbm4.1	100	93.128	ENSNBRG00000017755	rbm4.1	100	91.232	Neolamprologus_brichardi
ENSSPAG00000019053	rbm4.1	100	93.365	ENSONIG00000015730	rbm4.1	100	91.469	Oreochromis_niloticus
ENSSPAG00000019053	rbm4.1	100	80.095	ENSORLG00000012496	rbm4.1	100	79.384	Oryzias_latipes
ENSSPAG00000019053	rbm4.1	100	80.095	ENSORLG00020012454	rbm4.1	100	79.384	Oryzias_latipes_hni
ENSSPAG00000019053	rbm4.1	100	80.332	ENSORLG00015013678	rbm4.1	100	79.621	Oryzias_latipes_hsok
ENSSPAG00000019053	rbm4.1	100	81.280	ENSOMEG00000001001	rbm4.1	100	80.332	Oryzias_melastigma
ENSSPAG00000019053	rbm4.1	100	64.336	ENSPKIG00000020805	rbm4.1	85	79.710	Paramormyrops_kingsleyae
ENSSPAG00000019053	rbm4.1	99	47.143	ENSPFOG00000012685	-	99	45.412	Poecilia_formosa
ENSSPAG00000019053	rbm4.1	100	80.189	ENSPFOG00000012675	rbm4.1	100	78.538	Poecilia_formosa
ENSSPAG00000019053	rbm4.1	100	80.189	ENSPLAG00000018572	rbm4.1	100	78.538	Poecilia_latipinna
ENSSPAG00000019053	rbm4.1	100	80.189	ENSPMEG00000006290	rbm4.1	100	78.538	Poecilia_mexicana
ENSSPAG00000019053	rbm4.1	99	45.476	ENSPREG00000003764	-	88	64.171	Poecilia_reticulata
ENSSPAG00000019053	rbm4.1	100	80.189	ENSPREG00000003724	rbm4.1	100	78.538	Poecilia_reticulata
ENSSPAG00000019053	rbm4.1	100	92.891	ENSPNYG00000004662	rbm4.1	100	90.995	Pundamilia_nyererei
ENSSPAG00000019053	rbm4.1	100	67.606	ENSPNAG00000002539	rbm4.1	100	67.991	Pygocentrus_nattereri
ENSSPAG00000019053	rbm4.1	100	52.927	ENSPNAG00000013057	rbm4.2	100	50.812	Pygocentrus_nattereri
ENSSPAG00000019053	rbm4.1	100	64.569	ENSSFOG00015021996	sf1	100	63.403	Scleropages_formosus
ENSSPAG00000019053	rbm4.1	100	87.204	ENSSMAG00000007571	rbm4.1	100	84.123	Scophthalmus_maximus
ENSSPAG00000019053	rbm4.1	100	95.972	ENSSDUG00000003925	rbm4.1	100	95.972	Seriola_dumerili
ENSSPAG00000019053	rbm4.1	97	51.190	ENSSDUG00000003936	-	99	49.535	Seriola_dumerili
ENSSPAG00000019053	rbm4.1	97	49.282	ENSSLDG00000013157	-	99	49.766	Seriola_lalandi_dorsalis
ENSSPAG00000019053	rbm4.1	100	95.972	ENSSLDG00000013147	rbm4.1	100	95.972	Seriola_lalandi_dorsalis
ENSSPAG00000019053	rbm4.1	100	80.806	ENSTRUG00000013334	rbm4.1	100	77.962	Takifugu_rubripes
ENSSPAG00000019053	rbm4.1	78	89.216	ENSTNIG00000004821	rbm4.1	97	92.268	Tetraodon_nigroviridis
ENSSPAG00000019053	rbm4.1	100	80.189	ENSXCOG00000003731	rbm4.1	100	78.538	Xiphophorus_couchianus
ENSSPAG00000019053	rbm4.1	99	46.905	ENSXMAG00000008059	-	87	65.775	Xiphophorus_maculatus
ENSSPAG00000019053	rbm4.1	100	79.953	ENSXMAG00000008069	rbm4.1	100	78.302	Xiphophorus_maculatus