EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000019060 (Gene tree)
Gene ID: 103359710
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 13187 bases
Position: chrKK580461.1:406187-419373
Accession: 103359710
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000025209	KH_1	PF00013.29	3.3e-06	1	1
ENSSPAP00000025209	zf-CCHC	PF00098.23	0.00045	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000025626	-	4491	XM_008285196	ENSSPAP00000025209	677 (aa)	XP_008283418	UPI0004966FE3

Gene Model

Click here to download ENSSPAG00000019060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000019060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000019060	sf1	100	96.755	ENSAPOG00000012341	sf1	100	96.755	Acanthochromis_polyacanthus
ENSSPAG00000019060	sf1	100	97.489	ENSAOCG00000010934	sf1	100	97.489	Amphiprion_ocellaris
ENSSPAG00000019060	sf1	100	97.489	ENSAPEG00000009498	sf1	100	97.489	Amphiprion_percula
ENSSPAG00000019060	sf1	67	92.763	ENSATEG00000001894	sf1	97	94.394	Anabas_testudineus
ENSSPAG00000019060	sf1	84	65.733	ENSANAG00000022607	-	88	73.190	Aotus_nancymaae
ENSSPAG00000019060	sf1	61	76.815	ENSANAG00000026664	-	90	80.412	Aotus_nancymaae
ENSSPAG00000019060	sf1	67	91.868	ENSACLG00000007633	sf1	97	88.218	Astatotilapia_calliptera
ENSSPAG00000019060	sf1	69	84.567	ENSAMXG00000003630	sf1	62	84.486	Astyanax_mexicanus
ENSSPAG00000019060	sf1	61	75.878	ENSBTAG00000001035	SF1	63	80.155	Bos_taurus
ENSSPAG00000019060	sf1	61	75.878	ENSCJAG00000002780	SF1	75	67.823	Callithrix_jacchus
ENSSPAG00000019060	sf1	61	75.878	ENSCAFG00000014239	SF1	59	80.155	Canis_familiaris
ENSSPAG00000019060	sf1	61	75.878	ENSCAFG00020014381	SF1	59	80.155	Canis_lupus_dingo
ENSSPAG00000019060	sf1	61	75.878	ENSCHIG00000025867	SF1	69	80.155	Capra_hircus
ENSSPAG00000019060	sf1	58	76.998	ENSCAPG00000010762	SF1	65	81.818	Cavia_aperea
ENSSPAG00000019060	sf1	58	76.998	ENSCPOG00000012290	SF1	68	81.551	Cavia_porcellus
ENSSPAG00000019060	sf1	59	70.803	ENSCCAG00000023781	-	82	72.296	Cebus_capucinus
ENSSPAG00000019060	sf1	61	76.056	ENSCCAG00000037881	SF1	90	80.670	Cebus_capucinus
ENSSPAG00000019060	sf1	61	75.878	ENSCATG00000011564	SF1	90	80.670	Cercocebus_atys
ENSSPAG00000019060	sf1	61	75.878	ENSCSAG00000007258	SF1	69	80.155	Chlorocebus_sabaeus
ENSSPAG00000019060	sf1	56	71.608	ENSCHOG00000006008	SF1	66	75.766	Choloepus_hoffmanni
ENSSPAG00000019060	sf1	62	81.860	ENSCPBG00000023763	SF1	50	83.756	Chrysemys_picta_bellii
ENSSPAG00000019060	sf1	60	55.792	ENSCING00000005564	-	92	54.176	Ciona_intestinalis
ENSSPAG00000019060	sf1	61	51.643	ENSCSAVG00000009055	-	60	67.315	Ciona_savignyi
ENSSPAG00000019060	sf1	61	75.878	ENSCANG00000042201	SF1	91	80.670	Colobus_angolensis_palliatus
ENSSPAG00000019060	sf1	61	74.828	ENSCGRG00001003677	Sf1	66	80.412	Cricetulus_griseus_chok1gshd
ENSSPAG00000019060	sf1	58	75.887	ENSCGRG00000001708	Sf1	69	80.679	Cricetulus_griseus_crigri
ENSSPAG00000019060	sf1	97	91.239	ENSCSEG00000014375	sf1	94	91.364	Cynoglossus_semilaevis
ENSSPAG00000019060	sf1	98	89.744	ENSCVAG00000001670	sf1	97	89.394	Cyprinodon_variegatus
ENSSPAG00000019060	sf1	86	84.283	ENSDARG00000008188	sf1	69	89.975	Danio_rerio
ENSSPAG00000019060	sf1	61	74.600	ENSDNOG00000001282	SF1	69	80.670	Dasypus_novemcinctus
ENSSPAG00000019060	sf1	61	75.878	ENSDORG00000016334	Sf1	59	80.155	Dipodomys_ordii
ENSSPAG00000019060	sf1	58	71.014	ENSETEG00000012830	SF1	51	74.797	Echinops_telfairi
ENSSPAG00000019060	sf1	61	76.112	ENSEASG00005018272	SF1	69	80.412	Equus_asinus_asinus
ENSSPAG00000019060	sf1	61	76.112	ENSECAG00000024544	SF1	69	80.412	Equus_caballus
ENSSPAG00000019060	sf1	53	77.540	ENSEEUG00000001058	SF1	83	82.335	Erinaceus_europaeus
ENSSPAG00000019060	sf1	78	78.957	ENSELUG00000013225	sf1	64	83.402	Esox_lucius
ENSSPAG00000019060	sf1	61	75.878	ENSFCAG00000012231	SF1	75	68.226	Felis_catus
ENSSPAG00000019060	sf1	58	76.998	ENSFDAG00000009833	SF1	65	81.818	Fukomys_damarensis
ENSSPAG00000019060	sf1	97	89.074	ENSFHEG00000022656	sf1	97	89.378	Fundulus_heteroclitus
ENSSPAG00000019060	sf1	72	77.959	ENSGMOG00000007469	sf1	61	92.857	Gadus_morhua
ENSSPAG00000019060	sf1	89	89.109	ENSGAFG00000019284	sf1	77	89.308	Gambusia_affinis
ENSSPAG00000019060	sf1	62	81.628	ENSGAGG00000021691	SF1	71	71.124	Gopherus_agassizii
ENSSPAG00000019060	sf1	67	93.640	ENSHBUG00000011598	sf1	97	93.807	Haplochromis_burtoni
ENSSPAG00000019060	sf1	61	75.878	ENSHGLG00000009541	SF1	66	80.412	Heterocephalus_glaber_female
ENSSPAG00000019060	sf1	58	76.998	ENSHGLG00100013879	-	65	81.818	Heterocephalus_glaber_male
ENSSPAG00000019060	sf1	55	70.270	ENSHGLG00100008255	-	74	71.134	Heterocephalus_glaber_male
ENSSPAG00000019060	sf1	69	87.500	ENSHCOG00000011388	sf1	97	87.746	Hippocampus_comes
ENSSPAG00000019060	sf1	58	76.998	ENSSTOG00000009790	-	58	81.551	Ictidomys_tridecemlineatus
ENSSPAG00000019060	sf1	55	70.130	ENSSTOG00000024353	-	68	70.543	Ictidomys_tridecemlineatus
ENSSPAG00000019060	sf1	61	76.112	ENSJJAG00000011788	Sf1	59	80.412	Jaculus_jaculus
ENSSPAG00000019060	sf1	84	91.404	ENSKMAG00000005854	sf1	91	90.588	Kryptolebias_marmoratus
ENSSPAG00000019060	sf1	97	78.829	ENSLBEG00000019836	sf1	75	90.021	Labrus_bergylta
ENSSPAG00000019060	sf1	60	77.427	ENSLACG00000018493	SF1	68	79.200	Latimeria_chalumnae
ENSSPAG00000019060	sf1	67	80.338	ENSLOCG00000002130	sf1	70	80.162	Lepisosteus_oculatus
ENSSPAG00000019060	sf1	58	77.566	ENSLAFG00000007201	SF1	63	82.933	Loxodonta_africana
ENSSPAG00000019060	sf1	61	75.878	ENSMFAG00000033122	SF1	90	80.670	Macaca_fascicularis
ENSSPAG00000019060	sf1	61	75.878	ENSMMUG00000022606	SF1	90	81.530	Macaca_mulatta
ENSSPAG00000019060	sf1	61	75.878	ENSMNEG00000037901	SF1	90	80.670	Macaca_nemestrina
ENSSPAG00000019060	sf1	57	78.481	ENSMLEG00000040706	SF1	90	81.039	Mandrillus_leucophaeus
ENSSPAG00000019060	sf1	100	94.638	ENSMAMG00000001780	sf1	100	94.638	Mastacembelus_armatus
ENSSPAG00000019060	sf1	67	93.640	ENSMZEG00005009196	sf1	97	93.807	Maylandia_zebra
ENSSPAG00000019060	sf1	61	74.828	ENSMAUG00000014064	Sf1	66	80.412	Mesocricetus_auratus
ENSSPAG00000019060	sf1	61	75.878	ENSMICG00000001202	SF1	90	80.720	Microcebus_murinus
ENSSPAG00000019060	sf1	61	74.828	ENSMOCG00000022038	Sf1	66	80.412	Microtus_ochrogaster
ENSSPAG00000019060	sf1	86	88.468	ENSMMOG00000020474	sf1	87	87.606	Mola_mola
ENSSPAG00000019060	sf1	59	76.224	ENSMODG00000029407	SF1	80	81.794	Monodelphis_domestica
ENSSPAG00000019060	sf1	84	85.915	ENSMALG00000020521	sf1	92	88.028	Monopterus_albus
ENSSPAG00000019060	sf1	61	74.828	MGP_CAROLIEiJ_G0022607	Sf1	99	95.113	Mus_caroli
ENSSPAG00000019060	sf1	61	74.828	ENSMUSG00000024949	Sf1	99	95.113	Mus_musculus
ENSSPAG00000019060	sf1	61	74.828	MGP_PahariEiJ_G0014101	Sf1	99	95.113	Mus_pahari
ENSSPAG00000019060	sf1	61	74.828	MGP_SPRETEiJ_G0023518	Sf1	99	95.113	Mus_spretus
ENSSPAG00000019060	sf1	60	76.112	ENSMPUG00000012684	SF1	58	81.530	Mustela_putorius_furo
ENSSPAG00000019060	sf1	64	71.957	ENSMLUG00000029800	-	65	77.062	Myotis_lucifugus
ENSSPAG00000019060	sf1	58	76.998	ENSMLUG00000015217	-	58	81.530	Myotis_lucifugus
ENSSPAG00000019060	sf1	61	76.112	ENSNGAG00000005550	Sf1	66	80.670	Nannospalax_galili
ENSSPAG00000019060	sf1	61	76.047	ENSNLEG00000005236	-	91	80.670	Nomascus_leucogenys
ENSSPAG00000019060	sf1	58	76.429	ENSMEUG00000013424	SF1	68	81.941	Notamacropus_eugenii
ENSSPAG00000019060	sf1	53	76.676	ENSOPRG00000005008	SF1	66	82.036	Ochotona_princeps
ENSSPAG00000019060	sf1	67	93.421	ENSONIG00000015728	sf1	97	93.656	Oreochromis_niloticus
ENSSPAG00000019060	sf1	58	76.998	ENSOCUG00000026486	SF1	59	81.266	Oryctolagus_cuniculus
ENSSPAG00000019060	sf1	69	88.511	ENSORLG00000011853	sf1	69	87.815	Oryzias_latipes
ENSSPAG00000019060	sf1	69	88.936	ENSORLG00020011834	sf1	69	88.235	Oryzias_latipes_hni
ENSSPAG00000019060	sf1	68	88.865	ENSORLG00015012855	sf1	69	87.815	Oryzias_latipes_hsok
ENSSPAG00000019060	sf1	97	89.970	ENSOMEG00000005210	sf1	97	89.666	Oryzias_melastigma
ENSSPAG00000019060	sf1	61	75.878	ENSOGAG00000016196	SF1	59	80.155	Otolemur_garnettii
ENSSPAG00000019060	sf1	61	75.878	ENSOARG00000009166	SF1	66	80.155	Ovis_aries
ENSSPAG00000019060	sf1	59	77.184	ENSPPAG00000002799	-	90	82.058	Pan_paniscus
ENSSPAG00000019060	sf1	58	76.998	ENSPPRG00000013566	SF1	57	82.548	Panthera_pardus
ENSSPAG00000019060	sf1	58	76.998	ENSPTIG00000016141	SF1	66	81.530	Panthera_tigris_altaica
ENSSPAG00000019060	sf1	62	76.092	ENSPTRG00000003846	SF1	91	80.670	Pan_troglodytes
ENSSPAG00000019060	sf1	61	75.878	ENSPANG00000020754	SF1	90	80.670	Papio_anubis
ENSSPAG00000019060	sf1	61	74.828	ENSPEMG00000010463	Sf1	66	80.412	Peromyscus_maniculatus_bairdii
ENSSPAG00000019060	sf1	61	76.347	ENSPCIG00000018173	SF1	61	80.412	Phascolarctos_cinereus
ENSSPAG00000019060	sf1	97	90.288	ENSPFOG00000013683	sf1	97	90.288	Poecilia_formosa
ENSSPAG00000019060	sf1	90	89.886	ENSPLAG00000018076	sf1	93	89.723	Poecilia_latipinna
ENSSPAG00000019060	sf1	97	90.288	ENSPMEG00000005726	sf1	97	90.288	Poecilia_mexicana
ENSSPAG00000019060	sf1	97	89.681	ENSPREG00000004155	sf1	97	89.681	Poecilia_reticulata
ENSSPAG00000019060	sf1	61	75.878	ENSPPYG00000003098	-	71	80.155	Pongo_abelii
ENSSPAG00000019060	sf1	58	76.755	ENSPCAG00000013631	SF1	75	67.248	Procavia_capensis
ENSSPAG00000019060	sf1	61	75.878	ENSPCOG00000027546	SF1	90	80.463	Propithecus_coquereli
ENSSPAG00000019060	sf1	58	75.650	ENSPVAG00000016938	SF1	75	69.488	Pteropus_vampyrus
ENSSPAG00000019060	sf1	67	93.860	ENSPNYG00000004673	sf1	97	93.505	Pundamilia_nyererei
ENSSPAG00000019060	sf1	68	83.007	ENSPNAG00000013072	sf1	70	84.310	Pygocentrus_nattereri
ENSSPAG00000019060	sf1	61	74.828	ENSRNOG00000021085	Sf1	60	80.645	Rattus_norvegicus
ENSSPAG00000019060	sf1	61	75.878	ENSRBIG00000042818	SF1	91	80.928	Rhinopithecus_bieti
ENSSPAG00000019060	sf1	60	76.179	ENSRROG00000045655	SF1	91	81.039	Rhinopithecus_roxellana
ENSSPAG00000019060	sf1	86	62.600	ENSSBOG00000022267	-	90	66.838	Saimiri_boliviensis_boliviensis
ENSSPAG00000019060	sf1	72	70.183	ENSSHAG00000006841	SF1	70	81.627	Sarcophilus_harrisii
ENSSPAG00000019060	sf1	71	81.031	ENSSFOG00015021978	sf1	69	80.913	Scleropages_formosus
ENSSPAG00000019060	sf1	84	89.845	ENSSMAG00000007549	sf1	75	89.980	Scophthalmus_maximus
ENSSPAG00000019060	sf1	67	95.842	ENSSDUG00000003903	sf1	73	96.660	Seriola_dumerili
ENSSPAG00000019060	sf1	58	72.397	ENSSARG00000008180	SF1	71	76.738	Sorex_araneus
ENSSPAG00000019060	sf1	59	80.653	ENSSPUG00000012907	SF1	58	87.006	Sphenodon_punctatus
ENSSPAG00000019060	sf1	61	75.878	ENSSSCG00000013021	SF1	69	80.412	Sus_scrofa
ENSSPAG00000019060	sf1	73	71.375	ENSTNIG00000004820	sf1	77	74.940	Tetraodon_nigroviridis
ENSSPAG00000019060	sf1	58	72.277	ENSTBEG00000013133	SF1	53	75.676	Tupaia_belangeri
ENSSPAG00000019060	sf1	58	70.922	ENSTTRG00000008857	SF1	67	75.936	Tursiops_truncatus
ENSSPAG00000019060	sf1	61	75.644	ENSUMAG00000007268	SF1	71	80.155	Ursus_maritimus
ENSSPAG00000019060	sf1	61	75.878	ENSVVUG00000028585	SF1	69	80.155	Vulpes_vulpes
ENSSPAG00000019060	sf1	85	73.254	ENSXETG00000008434	sf1	62	85.124	Xenopus_tropicalis
ENSSPAG00000019060	sf1	54	93.973	ENSXCOG00000003704	sf1	73	92.228	Xiphophorus_couchianus
ENSSPAG00000019060	sf1	97	90.744	ENSXMAG00000007822	sf1	97	90.592	Xiphophorus_maculatus