EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000019182 (Gene tree)
Gene ID: -
Gene Symbol: cmss1
Alias: zgc:101814
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 3657 bases
Position: chrKK581559.1:159290-162946
Accession: 103370842
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000025399	CMS1	PF14617.6	2.5e-33	1	1
ENSSPAP00000025399	DEAD	PF00270.29	5.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000025819	-	969	XM_008300013	ENSSPAP00000025399	322 (aa)	XP_008298235	-

Gene Model

Click here to download ENSSPAG00000019182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000019182's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000019182	cmss1	82	55.056	ENSG00000184220	CMSS1	98	62.500	Homo_sapiens
ENSSPAG00000019182	cmss1	63	93.596	ENSAPOG00000010604	cmss1	100	85.441	Acanthochromis_polyacanthus
ENSSPAG00000019182	cmss1	63	64.039	ENSAMEG00000004092	CMSS1	80	63.768	Ailuropoda_melanoleuca
ENSSPAG00000019182	cmss1	79	68.914	ENSACIG00000021854	cmss1	99	70.455	Amphilophus_citrinellus
ENSSPAG00000019182	cmss1	63	93.103	ENSAOCG00000013361	cmss1	94	83.150	Amphiprion_ocellaris
ENSSPAG00000019182	cmss1	63	93.103	ENSAPEG00000005829	cmss1	94	83.333	Amphiprion_percula
ENSSPAG00000019182	cmss1	76	82.258	ENSATEG00000008209	cmss1	97	81.111	Anabas_testudineus
ENSSPAG00000019182	cmss1	63	65.347	ENSAPLG00000010542	CMSS1	90	65.534	Anas_platyrhynchos
ENSSPAG00000019182	cmss1	81	56.061	ENSACAG00000011065	CMSS1	95	55.939	Anolis_carolinensis
ENSSPAG00000019182	cmss1	82	52.416	ENSANAG00000023565	CMSS1	79	62.621	Aotus_nancymaae
ENSSPAG00000019182	cmss1	79	73.881	ENSACLG00000027294	cmss1	95	77.455	Astatotilapia_calliptera
ENSSPAG00000019182	cmss1	62	71.000	ENSAMXG00000002046	cmss1	70	71.845	Astyanax_mexicanus
ENSSPAG00000019182	cmss1	63	64.851	ENSBTAG00000013663	CMSS1	75	64.734	Bos_taurus
ENSSPAG00000019182	cmss1	84	53.480	ENSCJAG00000000610	CMSS1	79	63.592	Callithrix_jacchus
ENSSPAG00000019182	cmss1	63	64.851	ENSCAFG00000009230	CMSS1	75	64.563	Canis_familiaris
ENSSPAG00000019182	cmss1	59	66.138	ENSCAFG00020024156	-	61	65.803	Canis_lupus_dingo
ENSSPAG00000019182	cmss1	82	54.851	ENSCAFG00020009464	-	75	64.563	Canis_lupus_dingo
ENSSPAG00000019182	cmss1	63	64.851	ENSCHIG00000013003	CMSS1	92	55.725	Capra_hircus
ENSSPAG00000019182	cmss1	63	63.861	ENSTSYG00000009266	CMSS1	79	64.078	Carlito_syrichta
ENSSPAG00000019182	cmss1	58	55.914	ENSCAPG00000013584	CMSS1	87	55.914	Cavia_aperea
ENSSPAG00000019182	cmss1	82	55.056	ENSCPOG00000014680	CMSS1	74	65.049	Cavia_porcellus
ENSSPAG00000019182	cmss1	82	54.851	ENSCCAG00000034685	CMSS1	79	64.078	Cebus_capucinus
ENSSPAG00000019182	cmss1	82	54.887	ENSCATG00000031980	CMSS1	79	64.078	Cercocebus_atys
ENSSPAG00000019182	cmss1	62	63.000	ENSCLAG00000011241	CMSS1	89	62.802	Chinchilla_lanigera
ENSSPAG00000019182	cmss1	63	64.356	ENSCSAG00000006024	CMSS1	84	63.768	Chlorocebus_sabaeus
ENSSPAG00000019182	cmss1	62	46.500	ENSCHOG00000012098	CMSS1	75	47.087	Choloepus_hoffmanni
ENSSPAG00000019182	cmss1	60	41.837	ENSCING00000014848	-	96	43.333	Ciona_intestinalis
ENSSPAG00000019182	cmss1	82	55.056	ENSCANG00000031337	CMSS1	79	64.078	Colobus_angolensis_palliatus
ENSSPAG00000019182	cmss1	63	62.376	ENSCGRG00001014305	Cmss1	74	62.621	Cricetulus_griseus_chok1gshd
ENSSPAG00000019182	cmss1	63	62.376	ENSCGRG00000006722	Cmss1	80	62.621	Cricetulus_griseus_crigri
ENSSPAG00000019182	cmss1	78	68.182	ENSCSEG00000004958	cmss1	95	69.424	Cynoglossus_semilaevis
ENSSPAG00000019182	cmss1	76	74.615	ENSCVAG00000005039	cmss1	95	75.547	Cyprinodon_variegatus
ENSSPAG00000019182	cmss1	63	72.906	ENSDARG00000112579	cmss1	95	61.594	Danio_rerio
ENSSPAG00000019182	cmss1	63	64.356	ENSDNOG00000040418	CMSS1	75	64.078	Dasypus_novemcinctus
ENSSPAG00000019182	cmss1	62	64.500	ENSDORG00000010461	Cmss1	74	64.563	Dipodomys_ordii
ENSSPAG00000019182	cmss1	62	63.000	ENSEASG00005010966	CMSS1	94	63.107	Equus_asinus_asinus
ENSSPAG00000019182	cmss1	84	52.000	ENSECAG00000015662	CMSS1	91	62.319	Equus_caballus
ENSSPAG00000019182	cmss1	62	44.500	ENSEEUG00000007624	-	74	44.928	Erinaceus_europaeus
ENSSPAG00000019182	cmss1	63	75.369	ENSELUG00000019459	cmss1	69	75.728	Esox_lucius
ENSSPAG00000019182	cmss1	82	55.431	ENSFCAG00000044577	CMSS1	74	65.049	Felis_catus
ENSSPAG00000019182	cmss1	63	64.356	ENSFALG00000005816	CMSS1	87	64.563	Ficedula_albicollis
ENSSPAG00000019182	cmss1	63	64.356	ENSFDAG00000012577	CMSS1	90	64.563	Fukomys_damarensis
ENSSPAG00000019182	cmss1	63	85.222	ENSFHEG00000012008	cmss1	85	85.437	Fundulus_heteroclitus
ENSSPAG00000019182	cmss1	77	69.721	ENSGMOG00000016729	cmss1	95	67.669	Gadus_morhua
ENSSPAG00000019182	cmss1	63	66.337	ENSGALG00000015267	CMSS1	79	66.505	Gallus_gallus
ENSSPAG00000019182	cmss1	80	77.903	ENSGAFG00000021217	cmss1	100	77.903	Gambusia_affinis
ENSSPAG00000019182	cmss1	82	71.053	ENSGACG00000002798	cmss1	95	71.053	Gasterosteus_aculeatus
ENSSPAG00000019182	cmss1	63	66.337	ENSGAGG00000019861	CMSS1	80	66.019	Gopherus_agassizii
ENSSPAG00000019182	cmss1	84	53.261	ENSGGOG00000014125	CMSS1	93	53.986	Gorilla_gorilla
ENSSPAG00000019182	cmss1	83	75.540	ENSHBUG00000008431	cmss1	98	75.899	Haplochromis_burtoni
ENSSPAG00000019182	cmss1	62	64.000	ENSHGLG00000019481	CMSS1	84	64.563	Heterocephalus_glaber_female
ENSSPAG00000019182	cmss1	62	64.000	ENSHGLG00100010314	CMSS1	83	64.563	Heterocephalus_glaber_male
ENSSPAG00000019182	cmss1	75	72.619	ENSHCOG00000003222	cmss1	96	68.198	Hippocampus_comes
ENSSPAG00000019182	cmss1	74	64.940	ENSIPUG00000011591	cmss1	90	63.218	Ictalurus_punctatus
ENSSPAG00000019182	cmss1	82	55.263	ENSSTOG00000019366	CMSS1	93	55.263	Ictidomys_tridecemlineatus
ENSSPAG00000019182	cmss1	63	63.861	ENSJJAG00000014894	Cmss1	91	63.725	Jaculus_jaculus
ENSSPAG00000019182	cmss1	80	67.829	ENSKMAG00000002390	cmss1	100	68.992	Kryptolebias_marmoratus
ENSSPAG00000019182	cmss1	79	75.097	ENSLBEG00000006298	cmss1	99	74.806	Labrus_bergylta
ENSSPAG00000019182	cmss1	63	67.822	ENSLACG00000009293	CMSS1	90	67.961	Latimeria_chalumnae
ENSSPAG00000019182	cmss1	63	64.356	ENSLOCG00000009391	cmss1	73	64.563	Lepisosteus_oculatus
ENSSPAG00000019182	cmss1	62	63.000	ENSLAFG00000017509	CMSS1	91	63.285	Loxodonta_africana
ENSSPAG00000019182	cmss1	82	54.682	ENSMFAG00000045006	CMSS1	79	63.592	Macaca_fascicularis
ENSSPAG00000019182	cmss1	82	54.307	ENSMMUG00000002939	CMSS1	87	63.776	Macaca_mulatta
ENSSPAG00000019182	cmss1	82	54.682	ENSMNEG00000031315	CMSS1	79	63.592	Macaca_nemestrina
ENSSPAG00000019182	cmss1	82	54.682	ENSMLEG00000033660	CMSS1	79	63.592	Mandrillus_leucophaeus
ENSSPAG00000019182	cmss1	82	75.000	ENSMAMG00000017176	cmss1	94	75.357	Mastacembelus_armatus
ENSSPAG00000019182	cmss1	79	73.881	ENSMZEG00005021886	cmss1	95	77.455	Maylandia_zebra
ENSSPAG00000019182	cmss1	63	66.337	ENSMGAG00000014360	CMSS1	90	66.505	Meleagris_gallopavo
ENSSPAG00000019182	cmss1	82	37.736	ENSMAUG00000020609	Cmss1	68	45.146	Mesocricetus_auratus
ENSSPAG00000019182	cmss1	82	56.015	ENSMICG00000048977	CMSS1	93	55.094	Microcebus_murinus
ENSSPAG00000019182	cmss1	82	55.472	ENSMOCG00000021937	Cmss1	92	55.472	Microtus_ochrogaster
ENSSPAG00000019182	cmss1	76	73.061	ENSMMOG00000019794	cmss1	97	74.286	Mola_mola
ENSSPAG00000019182	cmss1	63	65.347	ENSMODG00000002275	CMSS1	78	64.734	Monodelphis_domestica
ENSSPAG00000019182	cmss1	82	73.239	ENSMALG00000004250	cmss1	95	75.273	Monopterus_albus
ENSSPAG00000019182	cmss1	82	56.274	MGP_CAROLIEiJ_G0020824	Cmss1	75	65.049	Mus_caroli
ENSSPAG00000019182	cmss1	82	55.513	ENSMUSG00000022748	Cmss1	75	64.078	Mus_musculus
ENSSPAG00000019182	cmss1	83	55.431	MGP_PahariEiJ_G0016524	Cmss1	94	55.431	Mus_pahari
ENSSPAG00000019182	cmss1	82	55.513	MGP_SPRETEiJ_G0021724	Cmss1	75	64.078	Mus_spretus
ENSSPAG00000019182	cmss1	62	63.819	ENSMPUG00000011324	CMSS1	79	63.902	Mustela_putorius_furo
ENSSPAG00000019182	cmss1	83	54.444	ENSMLUG00000001131	CMSS1	79	63.636	Myotis_lucifugus
ENSSPAG00000019182	cmss1	83	52.416	ENSNGAG00000020316	Cmss1	74	62.621	Nannospalax_galili
ENSSPAG00000019182	cmss1	79	73.507	ENSNBRG00000003095	cmss1	95	76.727	Neolamprologus_brichardi
ENSSPAG00000019182	cmss1	82	55.431	ENSNLEG00000034172	CMSS1	93	55.431	Nomascus_leucogenys
ENSSPAG00000019182	cmss1	63	54.455	ENSMEUG00000014505	CMSS1	91	54.106	Notamacropus_eugenii
ENSSPAG00000019182	cmss1	63	64.356	ENSOPRG00000002986	CMSS1	74	64.078	Ochotona_princeps
ENSSPAG00000019182	cmss1	63	55.446	ENSODEG00000009446	-	80	55.825	Octodon_degus
ENSSPAG00000019182	cmss1	63	54.950	ENSODEG00000001853	-	73	54.854	Octodon_degus
ENSSPAG00000019182	cmss1	82	54.275	ENSODEG00000005226	-	93	55.094	Octodon_degus
ENSSPAG00000019182	cmss1	63	61.881	ENSODEG00000003558	-	76	61.650	Octodon_degus
ENSSPAG00000019182	cmss1	78	74.340	ENSONIG00000006678	cmss1	100	78.161	Oreochromis_niloticus
ENSSPAG00000019182	cmss1	81	53.759	ENSOANG00000007529	CMSS1	89	62.981	Ornithorhynchus_anatinus
ENSSPAG00000019182	cmss1	63	64.356	ENSOCUG00000025366	CMSS1	75	64.078	Oryctolagus_cuniculus
ENSSPAG00000019182	cmss1	78	71.705	ENSORLG00000020340	cmss1	94	70.849	Oryzias_latipes
ENSSPAG00000019182	cmss1	78	64.542	ENSORLG00020012235	cmss1	99	64.706	Oryzias_latipes_hni
ENSSPAG00000019182	cmss1	79	63.197	ENSORLG00015015551	cmss1	100	62.731	Oryzias_latipes_hsok
ENSSPAG00000019182	cmss1	84	70.758	ENSOMEG00000012555	cmss1	95	71.119	Oryzias_melastigma
ENSSPAG00000019182	cmss1	63	64.851	ENSOGAG00000002045	CMSS1	91	64.251	Otolemur_garnettii
ENSSPAG00000019182	cmss1	81	55.513	ENSOARG00000017899	CMSS1	88	55.513	Ovis_aries
ENSSPAG00000019182	cmss1	81	55.344	ENSPPAG00000038515	CMSS1	93	56.107	Pan_paniscus
ENSSPAG00000019182	cmss1	82	55.431	ENSPPRG00000016767	CMSS1	74	65.049	Panthera_pardus
ENSSPAG00000019182	cmss1	82	55.431	ENSPTIG00000018274	CMSS1	74	64.563	Panthera_tigris_altaica
ENSSPAG00000019182	cmss1	82	55.431	ENSPTRG00000015157	CMSS1	97	53.261	Pan_troglodytes
ENSSPAG00000019182	cmss1	63	64.356	ENSPANG00000019980	CMSS1	82	64.078	Papio_anubis
ENSSPAG00000019182	cmss1	84	60.638	ENSPKIG00000012609	cmss1	100	64.000	Paramormyrops_kingsleyae
ENSSPAG00000019182	cmss1	63	67.327	ENSPSIG00000003849	CMSS1	90	66.990	Pelodiscus_sinensis
ENSSPAG00000019182	cmss1	63	82.843	ENSPMGG00000010286	cmss1	89	83.092	Periophthalmus_magnuspinnatus
ENSSPAG00000019182	cmss1	82	54.340	ENSPEMG00000016384	Cmss1	74	63.592	Peromyscus_maniculatus_bairdii
ENSSPAG00000019182	cmss1	63	51.471	ENSPMAG00000001146	cmss1	100	51.471	Petromyzon_marinus
ENSSPAG00000019182	cmss1	63	64.356	ENSPCIG00000015656	CMSS1	78	64.078	Phascolarctos_cinereus
ENSSPAG00000019182	cmss1	78	74.242	ENSPFOG00000016849	cmss1	96	74.818	Poecilia_formosa
ENSSPAG00000019182	cmss1	78	73.864	ENSPLAG00000008323	cmss1	96	74.453	Poecilia_latipinna
ENSSPAG00000019182	cmss1	78	73.864	ENSPMEG00000021020	cmss1	95	75.636	Poecilia_mexicana
ENSSPAG00000019182	cmss1	83	74.729	ENSPREG00000007618	cmss1	94	74.729	Poecilia_reticulata
ENSSPAG00000019182	cmss1	86	53.214	ENSPPYG00000013606	CMSS1	75	63.592	Pongo_abelii
ENSSPAG00000019182	cmss1	82	54.307	ENSPCOG00000020035	CMSS1	93	54.717	Propithecus_coquereli
ENSSPAG00000019182	cmss1	62	53.000	ENSPVAG00000017031	CMSS1	74	53.398	Pteropus_vampyrus
ENSSPAG00000019182	cmss1	71	73.140	ENSPNYG00000013428	cmss1	92	77.108	Pundamilia_nyererei
ENSSPAG00000019182	cmss1	81	60.806	ENSPNAG00000007912	cmss1	70	71.845	Pygocentrus_nattereri
ENSSPAG00000019182	cmss1	82	55.133	ENSRNOG00000027888	Cmss1	80	64.078	Rattus_norvegicus
ENSSPAG00000019182	cmss1	82	54.682	ENSRBIG00000037931	CMSS1	79	63.592	Rhinopithecus_bieti
ENSSPAG00000019182	cmss1	82	54.682	ENSRROG00000042910	CMSS1	79	63.592	Rhinopithecus_roxellana
ENSSPAG00000019182	cmss1	83	53.903	ENSSBOG00000030980	CMSS1	79	63.592	Saimiri_boliviensis_boliviensis
ENSSPAG00000019182	cmss1	63	65.347	ENSSHAG00000009321	CMSS1	82	64.734	Sarcophilus_harrisii
ENSSPAG00000019182	cmss1	63	77.833	ENSSFOG00015001509	cmss1	71	77.778	Scleropages_formosus
ENSSPAG00000019182	cmss1	76	77.907	ENSSMAG00000001653	cmss1	94	76.812	Scophthalmus_maximus
ENSSPAG00000019182	cmss1	78	80.075	ENSSDUG00000007719	cmss1	95	81.818	Seriola_dumerili
ENSSPAG00000019182	cmss1	83	78.947	ENSSLDG00000012300	cmss1	96	78.947	Seriola_lalandi_dorsalis
ENSSPAG00000019182	cmss1	82	45.660	ENSSARG00000003584	CMSS1	91	45.660	Sorex_araneus
ENSSPAG00000019182	cmss1	63	63.366	ENSSPUG00000003865	CMSS1	92	62.802	Sphenodon_punctatus
ENSSPAG00000019182	cmss1	62	63.000	ENSSSCG00000011970	CMSS1	93	54.307	Sus_scrofa
ENSSPAG00000019182	cmss1	63	63.861	ENSTGUG00000013635	CMSS1	90	64.078	Taeniopygia_guttata
ENSSPAG00000019182	cmss1	83	68.478	ENSTRUG00000015265	cmss1	73	83.981	Takifugu_rubripes
ENSSPAG00000019182	cmss1	63	75.862	ENSTNIG00000002880	cmss1	75	76.214	Tetraodon_nigroviridis
ENSSPAG00000019182	cmss1	63	45.545	ENSTBEG00000016722	CMSS1	74	46.117	Tupaia_belangeri
ENSSPAG00000019182	cmss1	82	53.333	ENSTTRG00000001562	CMSS1	93	53.333	Tursiops_truncatus
ENSSPAG00000019182	cmss1	63	64.851	ENSUAMG00000024209	CMSS1	92	64.563	Ursus_americanus
ENSSPAG00000019182	cmss1	83	54.212	ENSUMAG00000001983	CMSS1	94	54.478	Ursus_maritimus
ENSSPAG00000019182	cmss1	50	63.125	ENSVPAG00000000263	CMSS1	57	63.125	Vicugna_pacos
ENSSPAG00000019182	cmss1	62	64.500	ENSVVUG00000021647	-	84	64.563	Vulpes_vulpes
ENSSPAG00000019182	cmss1	63	63.861	ENSVVUG00000007776	-	81	63.592	Vulpes_vulpes
ENSSPAG00000019182	cmss1	81	48.014	ENSXETG00000011858	cmss1	74	59.709	Xenopus_tropicalis
ENSSPAG00000019182	cmss1	82	75.451	ENSXCOG00000018724	cmss1	95	75.269	Xiphophorus_couchianus
ENSSPAG00000019182	cmss1	80	75.836	ENSXMAG00000011243	cmss1	100	75.836	Xiphophorus_maculatus