EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000019219 (Gene tree)
Gene ID: 103371394
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 8522 bases
Position: chrKK580105.1:149944-158465
Accession: 103371394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000025419	RRM_1	PF00076.22	2.8e-39	1	2
ENSSPAP00000025419	RRM_1	PF00076.22	2.8e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000025838	-	1622	XM_008300709	ENSSPAP00000025419	402 (aa)	XP_008298931	UPI0004951E72

Gene Model

Click here to download ENSSPAG00000019219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000019219's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000019219	sf3b4	87	40.984	ENSSPAG00000009252	pabpc4	63	40.984
ENSSPAG00000019219	sf3b4	52	38.372	ENSSPAG00000008228	tia1l	88	33.838

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000019219	sf3b4	76	82.500	ENSG00000143368	SF3B4	100	97.368	Homo_sapiens
ENSSPAG00000019219	sf3b4	100	97.761	ENSAPOG00000017647	sf3b4	100	97.761	Acanthochromis_polyacanthus
ENSSPAG00000019219	sf3b4	60	97.500	ENSAMEG00000010073	SF3B4	57	97.500	Ailuropoda_melanoleuca
ENSSPAG00000019219	sf3b4	70	83.746	ENSACIG00000018455	sf3b4	68	97.826	Amphilophus_citrinellus
ENSSPAG00000019219	sf3b4	100	98.010	ENSAOCG00000019801	sf3b4	100	98.010	Amphiprion_ocellaris
ENSSPAG00000019219	sf3b4	100	98.010	ENSAPEG00000010365	sf3b4	100	98.010	Amphiprion_percula
ENSSPAG00000019219	sf3b4	72	96.564	ENSATEG00000012844	sf3b4	72	96.564	Anabas_testudineus
ENSSPAG00000019219	sf3b4	53	100.000	ENSACAG00000010019	SF3B4	55	98.261	Anolis_carolinensis
ENSSPAG00000019219	sf3b4	76	82.500	ENSANAG00000031025	SF3B4	57	97.500	Aotus_nancymaae
ENSSPAG00000019219	sf3b4	67	95.149	ENSACLG00000014260	sf3b4	60	97.500	Astatotilapia_calliptera
ENSSPAG00000019219	sf3b4	70	95.035	ENSAMXG00000008282	sf3b4	73	94.845	Astyanax_mexicanus
ENSSPAG00000019219	sf3b4	53	95.794	ENSBTAG00000012793	-	53	95.794	Bos_taurus
ENSSPAG00000019219	sf3b4	60	97.500	ENSBTAG00000012495	SF3B4	57	97.500	Bos_taurus
ENSSPAG00000019219	sf3b4	60	97.500	ENSCAFG00000011617	SF3B4	57	97.500	Canis_familiaris
ENSSPAG00000019219	sf3b4	60	97.500	ENSCAFG00020019775	SF3B4	57	97.500	Canis_lupus_dingo
ENSSPAG00000019219	sf3b4	60	97.500	ENSCHIG00000025663	-	57	97.500	Capra_hircus
ENSSPAG00000019219	sf3b4	73	61.279	ENSCHIG00000006654	-	50	74.627	Capra_hircus
ENSSPAG00000019219	sf3b4	76	82.500	ENSTSYG00000009295	SF3B4	57	97.500	Carlito_syrichta
ENSSPAG00000019219	sf3b4	60	97.500	ENSCPOG00000008267	SF3B4	57	97.500	Cavia_porcellus
ENSSPAG00000019219	sf3b4	76	82.500	ENSCATG00000033114	SF3B4	57	97.500	Cercocebus_atys
ENSSPAG00000019219	sf3b4	60	97.500	ENSCLAG00000015851	SF3B4	57	97.500	Chinchilla_lanigera
ENSSPAG00000019219	sf3b4	76	82.500	ENSCSAG00000018129	SF3B4	57	97.500	Chlorocebus_sabaeus
ENSSPAG00000019219	sf3b4	53	100.000	ENSCPBG00000008041	SF3B4	55	98.261	Chrysemys_picta_bellii
ENSSPAG00000019219	sf3b4	56	88.393	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSSPAG00000019219	sf3b4	52	91.429	ENSCSAVG00000007809	-	88	89.697	Ciona_savignyi
ENSSPAG00000019219	sf3b4	76	82.500	ENSCANG00000035579	SF3B4	57	97.500	Colobus_angolensis_palliatus
ENSSPAG00000019219	sf3b4	60	97.500	ENSCGRG00001003590	Sf3b4	57	97.500	Cricetulus_griseus_chok1gshd
ENSSPAG00000019219	sf3b4	60	97.500	ENSCGRG00000016914	Sf3b4	57	97.500	Cricetulus_griseus_crigri
ENSSPAG00000019219	sf3b4	66	94.361	ENSCVAG00000005536	sf3b4	59	95.652	Cyprinodon_variegatus
ENSSPAG00000019219	sf3b4	97	65.414	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSSPAG00000019219	sf3b4	58	92.241	ENSDNOG00000048908	-	54	94.248	Dasypus_novemcinctus
ENSSPAG00000019219	sf3b4	60	97.500	ENSDORG00000016366	Sf3b4	57	97.500	Dipodomys_ordii
ENSSPAG00000019219	sf3b4	57	88.158	ENSETEG00000008963	SF3B4	54	88.261	Echinops_telfairi
ENSSPAG00000019219	sf3b4	60	97.500	ENSEASG00005001477	SF3B4	57	97.500	Equus_asinus_asinus
ENSSPAG00000019219	sf3b4	60	97.500	ENSECAG00000024737	SF3B4	57	97.500	Equus_caballus
ENSSPAG00000019219	sf3b4	87	90.598	ENSELUG00000012876	sf3b4	60	99.583	Esox_lucius
ENSSPAG00000019219	sf3b4	60	97.500	ENSFCAG00000010106	SF3B4	57	97.500	Felis_catus
ENSSPAG00000019219	sf3b4	60	97.500	ENSFDAG00000009286	SF3B4	57	97.500	Fukomys_damarensis
ENSSPAG00000019219	sf3b4	57	97.826	ENSGMOG00000002519	sf3b4	67	97.826	Gadus_morhua
ENSSPAG00000019219	sf3b4	53	100.000	ENSGALG00000013352	SF3B4	55	98.696	Gallus_gallus
ENSSPAG00000019219	sf3b4	66	96.241	ENSGAFG00000010181	sf3b4	61	97.917	Gambusia_affinis
ENSSPAG00000019219	sf3b4	59	99.576	ENSGACG00000003819	sf3b4	60	99.576	Gasterosteus_aculeatus
ENSSPAG00000019219	sf3b4	76	70.032	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSSPAG00000019219	sf3b4	76	82.500	ENSGGOG00000004761	SF3B4	57	97.500	Gorilla_gorilla
ENSSPAG00000019219	sf3b4	67	95.149	ENSHBUG00000002028	sf3b4	60	97.500	Haplochromis_burtoni
ENSSPAG00000019219	sf3b4	60	97.500	ENSHGLG00000012360	SF3B4	57	97.500	Heterocephalus_glaber_female
ENSSPAG00000019219	sf3b4	60	97.500	ENSHGLG00100008533	SF3B4	57	97.500	Heterocephalus_glaber_male
ENSSPAG00000019219	sf3b4	56	97.357	ENSHCOG00000003014	sf3b4	57	96.943	Hippocampus_comes
ENSSPAG00000019219	sf3b4	69	95.290	ENSIPUG00000012242	Sf3b4	60	98.333	Ictalurus_punctatus
ENSSPAG00000019219	sf3b4	60	97.500	ENSSTOG00000000684	-	57	97.500	Ictidomys_tridecemlineatus
ENSSPAG00000019219	sf3b4	59	72.789	ENSJJAG00000022500	Sf3b4	59	72.789	Jaculus_jaculus
ENSSPAG00000019219	sf3b4	94	89.182	ENSKMAG00000008154	sf3b4	62	97.942	Kryptolebias_marmoratus
ENSSPAG00000019219	sf3b4	58	99.571	ENSLBEG00000026818	sf3b4	58	100.000	Labrus_bergylta
ENSSPAG00000019219	sf3b4	60	95.417	ENSLACG00000004436	SF3B4	66	95.417	Latimeria_chalumnae
ENSSPAG00000019219	sf3b4	58	99.138	ENSLOCG00000009048	sf3b4	55	99.565	Lepisosteus_oculatus
ENSSPAG00000019219	sf3b4	76	80.556	ENSLAFG00000008531	SF3B4	56	97.500	Loxodonta_africana
ENSSPAG00000019219	sf3b4	76	82.500	ENSMFAG00000042395	SF3B4	57	97.500	Macaca_fascicularis
ENSSPAG00000019219	sf3b4	89	63.187	ENSMFAG00000039067	-	58	79.724	Macaca_fascicularis
ENSSPAG00000019219	sf3b4	76	82.500	ENSMMUG00000007256	SF3B4	57	97.500	Macaca_mulatta
ENSSPAG00000019219	sf3b4	76	82.500	ENSMNEG00000031839	SF3B4	57	97.500	Macaca_nemestrina
ENSSPAG00000019219	sf3b4	89	62.637	ENSMNEG00000031526	-	58	79.263	Macaca_nemestrina
ENSSPAG00000019219	sf3b4	76	82.500	ENSMLEG00000038667	SF3B4	57	97.500	Mandrillus_leucophaeus
ENSSPAG00000019219	sf3b4	72	95.876	ENSMAMG00000014692	sf3b4	73	95.876	Mastacembelus_armatus
ENSSPAG00000019219	sf3b4	67	95.149	ENSMZEG00005026741	sf3b4	60	97.500	Maylandia_zebra
ENSSPAG00000019219	sf3b4	53	100.000	ENSMGAG00000000653	SF3B4	55	98.696	Meleagris_gallopavo
ENSSPAG00000019219	sf3b4	60	97.500	ENSMAUG00000015266	Sf3b4	57	97.500	Mesocricetus_auratus
ENSSPAG00000019219	sf3b4	60	97.500	ENSMICG00000044961	SF3B4	57	97.500	Microcebus_murinus
ENSSPAG00000019219	sf3b4	60	97.500	ENSMOCG00000013658	-	57	97.500	Microtus_ochrogaster
ENSSPAG00000019219	sf3b4	92	74.674	ENSMOCG00000014155	-	57	95.238	Microtus_ochrogaster
ENSSPAG00000019219	sf3b4	59	99.576	ENSMMOG00000018032	sf3b4	60	99.576	Mola_mola
ENSSPAG00000019219	sf3b4	76	82.500	ENSMODG00000018767	SF3B4	57	97.500	Monodelphis_domestica
ENSSPAG00000019219	sf3b4	72	93.814	ENSMALG00000006174	sf3b4	60	97.942	Monopterus_albus
ENSSPAG00000019219	sf3b4	60	97.500	MGP_CAROLIEiJ_G0025365	Sf3b4	57	97.500	Mus_caroli
ENSSPAG00000019219	sf3b4	60	97.500	ENSMUSG00000068856	Sf3b4	57	97.500	Mus_musculus
ENSSPAG00000019219	sf3b4	60	97.500	MGP_PahariEiJ_G0026809	Sf3b4	57	97.500	Mus_pahari
ENSSPAG00000019219	sf3b4	60	97.500	MGP_SPRETEiJ_G0026309	Sf3b4	57	97.500	Mus_spretus
ENSSPAG00000019219	sf3b4	60	97.500	ENSMPUG00000005563	SF3B4	57	97.500	Mustela_putorius_furo
ENSSPAG00000019219	sf3b4	60	97.083	ENSMLUG00000010789	SF3B4	57	97.083	Myotis_lucifugus
ENSSPAG00000019219	sf3b4	76	82.445	ENSNGAG00000016337	Sf3b4	57	97.500	Nannospalax_galili
ENSSPAG00000019219	sf3b4	67	95.522	ENSNBRG00000013865	sf3b4	60	97.917	Neolamprologus_brichardi
ENSSPAG00000019219	sf3b4	90	68.085	ENSNLEG00000000537	-	58	88.696	Nomascus_leucogenys
ENSSPAG00000019219	sf3b4	57	93.860	ENSOPRG00000010808	SF3B4	54	93.913	Ochotona_princeps
ENSSPAG00000019219	sf3b4	91	58.355	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSSPAG00000019219	sf3b4	76	69.470	ENSODEG00000003597	-	59	81.328	Octodon_degus
ENSSPAG00000019219	sf3b4	67	94.776	ENSONIG00000002730	sf3b4	61	97.119	Oreochromis_niloticus
ENSSPAG00000019219	sf3b4	65	72.932	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSSPAG00000019219	sf3b4	60	97.500	ENSOCUG00000004614	SF3B4	57	97.500	Oryctolagus_cuniculus
ENSSPAG00000019219	sf3b4	86	90.571	ENSORLG00000003062	sf3b4	59	98.696	Oryzias_latipes
ENSSPAG00000019219	sf3b4	79	90.994	ENSORLG00020000687	sf3b4	58	98.696	Oryzias_latipes_hni
ENSSPAG00000019219	sf3b4	79	90.994	ENSORLG00015010989	sf3b4	58	98.696	Oryzias_latipes_hsok
ENSSPAG00000019219	sf3b4	58	98.276	ENSOMEG00000013694	sf3b4	58	98.696	Oryzias_melastigma
ENSSPAG00000019219	sf3b4	60	97.500	ENSOGAG00000006265	SF3B4	57	97.500	Otolemur_garnettii
ENSSPAG00000019219	sf3b4	72	73.810	ENSOARG00000007368	-	55	81.858	Ovis_aries
ENSSPAG00000019219	sf3b4	60	97.500	ENSOARG00000020718	-	57	97.500	Ovis_aries
ENSSPAG00000019219	sf3b4	76	82.500	ENSPPAG00000040904	SF3B4	57	97.500	Pan_paniscus
ENSSPAG00000019219	sf3b4	76	77.287	ENSPPAG00000030024	-	59	87.500	Pan_paniscus
ENSSPAG00000019219	sf3b4	60	97.500	ENSPPRG00000007384	SF3B4	57	97.500	Panthera_pardus
ENSSPAG00000019219	sf3b4	60	97.500	ENSPTIG00000014530	SF3B4	57	97.500	Panthera_tigris_altaica
ENSSPAG00000019219	sf3b4	76	77.346	ENSPTRG00000049727	-	60	87.917	Pan_troglodytes
ENSSPAG00000019219	sf3b4	76	82.500	ENSPTRG00000001243	SF3B4	57	97.500	Pan_troglodytes
ENSSPAG00000019219	sf3b4	76	82.500	ENSPANG00000005126	SF3B4	57	97.500	Papio_anubis
ENSSPAG00000019219	sf3b4	70	97.518	ENSPKIG00000020669	sf3b4	77	97.241	Paramormyrops_kingsleyae
ENSSPAG00000019219	sf3b4	60	97.500	ENSPEMG00000017568	Sf3b4	57	97.500	Peromyscus_maniculatus_bairdii
ENSSPAG00000019219	sf3b4	53	95.305	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSSPAG00000019219	sf3b4	76	82.500	ENSPCIG00000008765	SF3B4	57	97.500	Phascolarctos_cinereus
ENSSPAG00000019219	sf3b4	66	96.255	ENSPFOG00000005754	sf3b4	62	97.531	Poecilia_formosa
ENSSPAG00000019219	sf3b4	66	96.255	ENSPLAG00000001401	sf3b4	67	97.531	Poecilia_latipinna
ENSSPAG00000019219	sf3b4	66	96.255	ENSPREG00000011076	sf3b4	60	97.531	Poecilia_reticulata
ENSSPAG00000019219	sf3b4	52	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSSPAG00000019219	sf3b4	60	97.500	ENSPCOG00000015399	SF3B4	57	97.500	Propithecus_coquereli
ENSSPAG00000019219	sf3b4	60	97.500	ENSPVAG00000014171	SF3B4	57	97.500	Pteropus_vampyrus
ENSSPAG00000019219	sf3b4	67	95.149	ENSPNYG00000012700	sf3b4	60	97.500	Pundamilia_nyererei
ENSSPAG00000019219	sf3b4	60	97.917	ENSPNAG00000000686	sf3b4	61	97.917	Pygocentrus_nattereri
ENSSPAG00000019219	sf3b4	60	97.500	ENSRNOG00000021181	Sf3b4	57	97.500	Rattus_norvegicus
ENSSPAG00000019219	sf3b4	76	82.500	ENSRBIG00000043392	SF3B4	57	97.500	Rhinopithecus_bieti
ENSSPAG00000019219	sf3b4	92	60.156	ENSRROG00000028213	-	56	74.775	Rhinopithecus_roxellana
ENSSPAG00000019219	sf3b4	76	82.500	ENSRROG00000029366	SF3B4	57	97.500	Rhinopithecus_roxellana
ENSSPAG00000019219	sf3b4	76	82.188	ENSSBOG00000012310	-	57	97.083	Saimiri_boliviensis_boliviensis
ENSSPAG00000019219	sf3b4	76	79.062	ENSSHAG00000004043	SF3B4	56	92.917	Sarcophilus_harrisii
ENSSPAG00000019219	sf3b4	70	96.809	ENSSFOG00015008864	sf3b4	71	96.564	Scleropages_formosus
ENSSPAG00000019219	sf3b4	100	89.826	ENSSMAG00000006837	sf3b4	60	99.167	Scophthalmus_maximus
ENSSPAG00000019219	sf3b4	100	98.015	ENSSDUG00000012064	sf3b4	100	98.015	Seriola_dumerili
ENSSPAG00000019219	sf3b4	100	97.767	ENSSLDG00000014226	sf3b4	100	97.767	Seriola_lalandi_dorsalis
ENSSPAG00000019219	sf3b4	66	86.232	ENSSPUG00000001028	SF3B4	58	98.261	Sphenodon_punctatus
ENSSPAG00000019219	sf3b4	79	57.632	ENSSSCG00000039440	-	56	64.348	Sus_scrofa
ENSSPAG00000019219	sf3b4	76	80.805	ENSSSCG00000006665	-	57	97.500	Sus_scrofa
ENSSPAG00000019219	sf3b4	59	97.034	ENSTGUG00000004470	SF3B4	91	98.261	Taeniopygia_guttata
ENSSPAG00000019219	sf3b4	79	90.596	ENSTRUG00000004516	sf3b4	59	97.881	Takifugu_rubripes
ENSSPAG00000019219	sf3b4	57	98.696	ENSTNIG00000009156	sf3b4	59	98.696	Tetraodon_nigroviridis
ENSSPAG00000019219	sf3b4	60	97.500	ENSTTRG00000005217	SF3B4	57	97.500	Tursiops_truncatus
ENSSPAG00000019219	sf3b4	60	97.500	ENSUAMG00000022468	SF3B4	57	97.500	Ursus_americanus
ENSSPAG00000019219	sf3b4	60	97.500	ENSUMAG00000003802	SF3B4	57	97.500	Ursus_maritimus
ENSSPAG00000019219	sf3b4	57	97.368	ENSVPAG00000008152	SF3B4	55	97.368	Vicugna_pacos
ENSSPAG00000019219	sf3b4	60	97.500	ENSVVUG00000007732	-	61	97.500	Vulpes_vulpes
ENSSPAG00000019219	sf3b4	76	82.951	ENSXETG00000011038	sf3b4	53	100.000	Xenopus_tropicalis
ENSSPAG00000019219	sf3b4	66	96.629	ENSXCOG00000019895	sf3b4	62	97.942	Xiphophorus_couchianus
ENSSPAG00000019219	sf3b4	66	96.617	ENSXMAG00000003772	sf3b4	62	97.942	Xiphophorus_maculatus