EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000019229 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DNA-directed RNA polymerase II subunit RPB2-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 3640 bases
Position: chrKK582148.1:2089-5728
Accession: 103373818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000025466	RNA_pol_Rpb2_5	PF04567.17	2.5e-05	1	1
ENSSPAP00000025466	RNA_pol_Rpb2_7	PF04560.20	1.4e-34	1	1
ENSSPAP00000025466	RNA_pol_Rpb2_6	PF00562.28	5.8e-129	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000025885	-	1506	XM_008303822	ENSSPAP00000025466	501 (aa)	XP_008302044	-

Gene Model

Click here to download ENSSPAG00000019229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000019229's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000019229	-	67	47.024	ENSSPAG00000008909	polr3b	95	47.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000019229	-	97	37.773	ENSG00000125630	POLR1B	67	34.513	Homo_sapiens
ENSSPAG00000019229	-	96	38.076	ENSACAG00000007117	-	69	38.076	Anolis_carolinensis
ENSSPAG00000019229	-	97	38.171	ENSANAG00000026201	POLR1B	51	38.171	Aotus_nancymaae
ENSSPAG00000019229	-	99	97.400	ENSBTAG00000019366	POLR2B	50	97.400	Bos_taurus
ENSSPAG00000019229	-	97	37.773	ENSCJAG00000016433	POLR1B	51	37.773	Callithrix_jacchus
ENSSPAG00000019229	-	97	38.569	ENSTSYG00000003669	POLR1B	51	38.569	Carlito_syrichta
ENSSPAG00000019229	-	97	37.773	ENSCCAG00000035252	POLR1B	51	37.773	Cebus_capucinus
ENSSPAG00000019229	-	97	37.773	ENSCATG00000037382	POLR1B	51	37.773	Cercocebus_atys
ENSSPAG00000019229	-	95	38.632	ENSCPBG00000003962	POLR1B	52	38.632	Chrysemys_picta_bellii
ENSSPAG00000019229	-	97	44.400	ENSCSAVG00000007982	-	56	44.928	Ciona_savignyi
ENSSPAG00000019229	-	97	37.773	ENSCANG00000039531	POLR1B	51	37.773	Colobus_angolensis_palliatus
ENSSPAG00000019229	-	76	45.455	ENSEBUG00000015791	polr1b	55	42.149	Eptatretus_burgeri
ENSSPAG00000019229	-	95	38.632	ENSFCAG00000008091	POLR1B	50	38.632	Felis_catus
ENSSPAG00000019229	-	67	82.090	ENSGAFG00000016488	-	100	82.090	Gambusia_affinis
ENSSPAG00000019229	-	97	37.773	ENSGGOG00000013494	POLR1B	51	37.773	Gorilla_gorilla
ENSSPAG00000019229	-	67	41.667	ENSHBUG00000008882	polr3b	95	41.667	Haplochromis_burtoni
ENSSPAG00000019229	-	99	97.800	ENSLAFG00000003198	POLR2B	54	97.800	Loxodonta_africana
ENSSPAG00000019229	-	96	38.800	ENSLAFG00000007659	POLR1B	51	38.800	Loxodonta_africana
ENSSPAG00000019229	-	97	37.972	ENSMFAG00000032912	POLR1B	51	37.972	Macaca_fascicularis
ENSSPAG00000019229	-	97	37.972	ENSMMUG00000009468	POLR1B	51	37.972	Macaca_mulatta
ENSSPAG00000019229	-	97	37.972	ENSMNEG00000036047	POLR1B	51	37.972	Macaca_nemestrina
ENSSPAG00000019229	-	97	37.773	ENSMLEG00000030588	POLR1B	52	37.773	Mandrillus_leucophaeus
ENSSPAG00000019229	-	99	95.600	ENSMICG00000015166	POLR2B	99	95.600	Microcebus_murinus
ENSSPAG00000019229	-	97	37.773	ENSNLEG00000001656	POLR1B	51	37.773	Nomascus_leucogenys
ENSSPAG00000019229	-	67	46.131	ENSOMEG00000010619	polr3b	95	46.131	Oryzias_melastigma
ENSSPAG00000019229	-	97	37.773	ENSPPAG00000002774	POLR1B	51	37.773	Pan_paniscus
ENSSPAG00000019229	-	95	38.632	ENSPPRG00000005760	POLR1B	50	38.632	Panthera_pardus
ENSSPAG00000019229	-	95	38.632	ENSPTIG00000013496	POLR1B	50	38.632	Panthera_tigris_altaica
ENSSPAG00000019229	-	97	37.972	ENSPTRG00000012366	POLR1B	51	37.972	Pan_troglodytes
ENSSPAG00000019229	-	97	37.773	ENSPANG00000023423	POLR1B	51	37.773	Papio_anubis
ENSSPAG00000019229	-	67	46.726	ENSPMGG00000013671	polr3b	95	46.726	Periophthalmus_magnuspinnatus
ENSSPAG00000019229	-	95	46.901	ENSPMAG00000008197	-	98	46.901	Petromyzon_marinus
ENSSPAG00000019229	-	100	94.411	ENSPMAG00000001164	-	57	94.411	Petromyzon_marinus
ENSSPAG00000019229	-	91	82.418	ENSPCOG00000009281	-	98	82.418	Propithecus_coquereli
ENSSPAG00000019229	-	99	97.600	ENSRBIG00000042838	POLR2B	99	97.600	Rhinopithecus_bieti
ENSSPAG00000019229	-	97	37.773	ENSRBIG00000019757	POLR1B	51	37.773	Rhinopithecus_bieti
ENSSPAG00000019229	-	97	37.773	ENSSBOG00000024562	POLR1B	51	37.773	Saimiri_boliviensis_boliviensis
ENSSPAG00000019229	-	99	97.600	ENSSBOG00000023163	POLR2B	51	97.600	Saimiri_boliviensis_boliviensis
ENSSPAG00000019229	-	99	97.200	ENSSPUG00000018295	POLR2B	99	97.200	Sphenodon_punctatus
ENSSPAG00000019229	-	66	46.246	ENSSPUG00000004905	-	94	46.246	Sphenodon_punctatus
ENSSPAG00000019229	-	95	37.827	ENSSPUG00000014298	POLR1B	52	37.827	Sphenodon_punctatus
ENSSPAG00000019229	-	100	99.002	ENSTRUG00000008631	POLR2B	50	99.002	Takifugu_rubripes
ENSSPAG00000019229	-	80	96.750	ENSUAMG00000003345	-	90	96.750	Ursus_americanus
ENSSPAG00000019229	-	96	46.201	ENSUAMG00000024267	POLR3B	75	46.201	Ursus_americanus
ENSSPAG00000019229	-	67	81.791	ENSXCOG00000014654	-	100	81.791	Xiphophorus_couchianus