EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSPAG00000019265 (Gene tree)
Gene ID
103371419
Gene Symbol
pabpc1b
Alias
-
Full Name
polyadenylate-binding protein 1
Gene Type
protein_coding
Species
Stegastes_partitus
Status
putative
Strand
Minus strand
Length
8829 bases
Position
chrKK580105.1:178968-187796
Accession
103371419
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPAP00000025539PABPPF00658.183.5e-3211
ENSSPAP00000025520PABPPF00658.184.3e-3211
ENSSPAP00000025539RRM_5PF13893.65.1e-1012
ENSSPAP00000025539RRM_5PF13893.65.1e-1022
ENSSPAP00000025520RRM_5PF13893.67.9e-1012
ENSSPAP00000025520RRM_5PF13893.67.9e-1022
ENSSPAP00000025539RRM_1PF00076.222.4e-9014
ENSSPAP00000025539RRM_1PF00076.222.4e-9024
ENSSPAP00000025539RRM_1PF00076.222.4e-9034
ENSSPAP00000025539RRM_1PF00076.222.4e-9044
ENSSPAP00000025520RRM_1PF00076.223.9e-9014
ENSSPAP00000025520RRM_1PF00076.223.9e-9024
ENSSPAP00000025520RRM_1PF00076.223.9e-9034
ENSSPAP00000025520RRM_1PF00076.223.9e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPAT00000025959-1737-ENSSPAP00000025539578 (aa)--
ENSSPAT00000025939-4299XM_008300746ENSSPAP00000025520633 (aa)XP_008298968UPI00049555BA
Gene Model
Click here to download ENSSPAG00000019265's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000019265's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSPAG00000019265pabpc1b5336.986ENSSPAG00000019028celf3b6936.986
ENSSPAG00000019265pabpc1b6436.145ENSSPAG00000018867elavl48536.145
ENSSPAG00000019265pabpc1b10090.267ENSSPAG00000014453-10090.596
ENSSPAG00000019265pabpc1b6336.000ENSSPAG00000018685rbm196236.000
ENSSPAG00000019265pabpc1b5437.500ENSSPAG00000007458-5737.500
ENSSPAG00000019265pabpc1b6230.435ENSSPAG00000005029trnau1apa5630.435
ENSSPAG00000019265pabpc1b5836.047ENSSPAG00000005647-5136.905
ENSSPAG00000019265pabpc1b6430.682ENSSPAG00000004511-7630.108
ENSSPAG00000019265pabpc1b6430.719ENSSPAG00000000990elavl38930.719
ENSSPAG00000019265pabpc1b5333.333ENSSPAG00000017571rbfox3b5638.158
ENSSPAG00000019265pabpc1b5136.986ENSSPAG00000003615celf3a6336.986
ENSSPAG00000019265pabpc1b6437.349ENSSPAG00000002388ELAVL29237.349
ENSSPAG00000019265pabpc1b6034.091ENSSPAG00000009569celf16735.714
ENSSPAG00000019265pabpc1b9879.474ENSSPAG00000009252pabpc49979.094
ENSSPAG00000019265pabpc1b9871.605ENSSPAG00000017137pabpc1l9971.605
ENSSPAG00000019265pabpc1b5235.616ENSSPAG00000021838celf5a7235.616
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPAG00000019265pabpc1b6379.592ENSG00000186288PABPC1L2A9879.592Homo_sapiens
ENSSPAG00000019265pabpc1b6379.592ENSG00000184388PABPC1L2B9879.592Homo_sapiens
ENSSPAG00000019265pabpc1b10098.580ENSAPOG00000017776pabpc1b10098.580Acanthochromis_polyacanthus
ENSSPAG00000019265pabpc1b10090.909ENSAPOG00000015105pabpc1a10090.752Acanthochromis_polyacanthus
ENSSPAG00000019265pabpc1b6579.592ENSAMEG00000019441-9879.592Ailuropoda_melanoleuca
ENSSPAG00000019265pabpc1b10091.956ENSACIG00000018366pabpc1b10091.956Amphilophus_citrinellus
ENSSPAG00000019265pabpc1b10091.066ENSACIG00000004685pabpc1a10090.752Amphilophus_citrinellus
ENSSPAG00000019265pabpc1b10090.110ENSAOCG00000011656pabpc1a10090.439Amphiprion_ocellaris
ENSSPAG00000019265pabpc1b10098.423ENSAOCG00000019839pabpc1b10098.423Amphiprion_ocellaris
ENSSPAG00000019265pabpc1b10098.423ENSAPEG00000010435pabpc1b10098.423Amphiprion_percula
ENSSPAG00000019265pabpc1b10090.110ENSAPEG00000006963pabpc1a10090.439Amphiprion_percula
ENSSPAG00000019265pabpc1b10097.327ENSATEG00000012917pabpc1b10097.327Anabas_testudineus
ENSSPAG00000019265pabpc1b10090.110ENSATEG00000024852pabpc1a10090.439Anabas_testudineus
ENSSPAG00000019265pabpc1b6379.592ENSANAG00000019431-9879.592Aotus_nancymaae
ENSSPAG00000019265pabpc1b6379.592ENSANAG00000019429-9879.592Aotus_nancymaae
ENSSPAG00000019265pabpc1b10096.530ENSACLG00000014335pabpc1b10096.530Astatotilapia_calliptera
ENSSPAG00000019265pabpc1b10090.909ENSACLG00000009399pabpc1a10091.304Astatotilapia_calliptera
ENSSPAG00000019265pabpc1b10095.433ENSAMXG00000008599pabpc1b10095.433Astyanax_mexicanus
ENSSPAG00000019265pabpc1b6576.555ENSBTAG00000052491-9876.555Bos_taurus
ENSSPAG00000019265pabpc1b6578.537ENSBTAG00000050902-9878.537Bos_taurus
ENSSPAG00000019265pabpc1b6379.592ENSCJAG00000041326-9879.592Callithrix_jacchus
ENSSPAG00000019265pabpc1b6578.537ENSCAFG00020002052-9878.537Canis_lupus_dingo
ENSSPAG00000019265pabpc1b6379.592ENSCHIG00000006283-9879.592Capra_hircus
ENSSPAG00000019265pabpc1b6379.592ENSCHIG00000011138-9879.592Capra_hircus
ENSSPAG00000019265pabpc1b6379.592ENSTSYG00000001775-9879.592Carlito_syrichta
ENSSPAG00000019265pabpc1b6579.592ENSCPOG00000009525-9879.592Cavia_porcellus
ENSSPAG00000019265pabpc1b6379.592ENSCCAG00000031524-9879.592Cebus_capucinus
ENSSPAG00000019265pabpc1b6379.592ENSCATG00000042826-9879.592Cercocebus_atys
ENSSPAG00000019265pabpc1b6379.592ENSCATG00000043125-9879.592Cercocebus_atys
ENSSPAG00000019265pabpc1b6377.551ENSCLAG00000017412-9877.551Chinchilla_lanigera
ENSSPAG00000019265pabpc1b6377.551ENSCLAG00000017409-9877.551Chinchilla_lanigera
ENSSPAG00000019265pabpc1b6579.592ENSCSAG00000000102-9879.592Chlorocebus_sabaeus
ENSSPAG00000019265pabpc1b6379.558ENSCGRG00001023387-9677.320Cricetulus_griseus_chok1gshd
ENSSPAG00000019265pabpc1b9990.620ENSCSEG00000013324pabpc1a9990.952Cynoglossus_semilaevis
ENSSPAG00000019265pabpc1b10091.956ENSCSEG00000015241-10091.956Cynoglossus_semilaevis
ENSSPAG00000019265pabpc1b10090.439ENSCVAG00000021872pabpc1a10090.125Cyprinodon_variegatus
ENSSPAG00000019265pabpc1b10094.646ENSCVAG00000005489pabpc1b10094.646Cyprinodon_variegatus
ENSSPAG00000019265pabpc1b10092.138ENSDARG00000017219pabpc1a10092.296Danio_rerio
ENSSPAG00000019265pabpc1b10096.850ENSDARG00000021140pabpc1b10096.850Danio_rerio
ENSSPAG00000019265pabpc1b6579.894ENSDNOG00000030926-9878.061Dasypus_novemcinctus
ENSSPAG00000019265pabpc1b6377.041ENSDORG00000011362-9877.041Dipodomys_ordii
ENSSPAG00000019265pabpc1b6578.155ENSEASG00005010399-9878.155Equus_asinus_asinus
ENSSPAG00000019265pabpc1b6578.155ENSECAG00000002620-9878.155Equus_caballus
ENSSPAG00000019265pabpc1b6575.000ENSEEUG00000008203-9875.000Erinaceus_europaeus
ENSSPAG00000019265pabpc1b10092.936ENSELUG00000015062-10092.936Esox_lucius
ENSSPAG00000019265pabpc1b9991.981ENSELUG00000003614pabpc1a10091.667Esox_lucius
ENSSPAG00000019265pabpc1b6559.483ENSELUG00000005389-9759.483Esox_lucius
ENSSPAG00000019265pabpc1b6379.592ENSFCAG00000039701-9879.592Felis_catus
ENSSPAG00000019265pabpc1b6579.592ENSFDAG00000005484-9879.592Fukomys_damarensis
ENSSPAG00000019265pabpc1b10090.125ENSFHEG00000018979pabpc1a10090.282Fundulus_heteroclitus
ENSSPAG00000019265pabpc1b10094.637ENSFHEG00000008186pabpc1b10094.637Fundulus_heteroclitus
ENSSPAG00000019265pabpc1b9989.319ENSGMOG00000013448pabpc1a9989.319Gadus_morhua
ENSSPAG00000019265pabpc1b10085.826ENSGMOG00000002448-10085.826Gadus_morhua
ENSSPAG00000019265pabpc1b10096.057ENSGAFG00000010193pabpc1b10096.057Gambusia_affinis
ENSSPAG00000019265pabpc1b10089.969ENSGAFG00000019750pabpc1a10090.125Gambusia_affinis
ENSSPAG00000019265pabpc1b10093.458ENSGACG00000003771pabpc1b10093.769Gasterosteus_aculeatus
ENSSPAG00000019265pabpc1b10090.752ENSGACG00000003572pabpc1a10090.752Gasterosteus_aculeatus
ENSSPAG00000019265pabpc1b6379.592ENSGGOG00000038606-9879.592Gorilla_gorilla
ENSSPAG00000019265pabpc1b6379.592ENSGGOG00000043933-9879.592Gorilla_gorilla
ENSSPAG00000019265pabpc1b10090.909ENSHBUG00000020487pabpc1a10091.304Haplochromis_burtoni
ENSSPAG00000019265pabpc1b10096.530ENSHBUG00000002075pabpc1b10096.530Haplochromis_burtoni
ENSSPAG00000019265pabpc1b6578.571ENSHGLG00000019668-9878.571Heterocephalus_glaber_female
ENSSPAG00000019265pabpc1b6578.571ENSHGLG00000019762-9878.571Heterocephalus_glaber_female
ENSSPAG00000019265pabpc1b6578.571ENSHGLG00100020854-9878.571Heterocephalus_glaber_male
ENSSPAG00000019265pabpc1b10090.110ENSHCOG00000013502pabpc1a10090.439Hippocampus_comes
ENSSPAG00000019265pabpc1b9874.821ENSHCOG00000003175pabpc1b9974.821Hippocampus_comes
ENSSPAG00000019265pabpc1b10089.850ENSIPUG00000010791-10089.850Ictalurus_punctatus
ENSSPAG00000019265pabpc1b8856.716ENSIPUG00000018724-8656.716Ictalurus_punctatus
ENSSPAG00000019265pabpc1b8054.906ENSIPUG00000021244-6555.115Ictalurus_punctatus
ENSSPAG00000019265pabpc1b10088.661ENSIPUG00000008848pabpc1a10088.661Ictalurus_punctatus
ENSSPAG00000019265pabpc1b6579.082ENSSTOG00000026028-9879.082Ictidomys_tridecemlineatus
ENSSPAG00000019265pabpc1b6579.082ENSSTOG00000022096-9879.082Ictidomys_tridecemlineatus
ENSSPAG00000019265pabpc1b6378.061ENSJJAG00000007037-9878.061Jaculus_jaculus
ENSSPAG00000019265pabpc1b10090.596ENSKMAG00000000605pabpc1a10090.282Kryptolebias_marmoratus
ENSSPAG00000019265pabpc1b10094.637ENSKMAG00000008049pabpc1b10094.953Kryptolebias_marmoratus
ENSSPAG00000019265pabpc1b10096.998ENSLBEG00000026845pabpc1b10096.998Labrus_bergylta
ENSSPAG00000019265pabpc1b10090.596ENSLBEG00000024002-10090.596Labrus_bergylta
ENSSPAG00000019265pabpc1b6578.974ENSLAFG00000023096-9878.974Loxodonta_africana
ENSSPAG00000019265pabpc1b6379.188ENSMFAG00000028878-9879.188Macaca_fascicularis
ENSSPAG00000019265pabpc1b6379.592ENSMMUG00000037681-9879.592Macaca_mulatta
ENSSPAG00000019265pabpc1b6379.592ENSMMUG00000039929-9879.592Macaca_mulatta
ENSSPAG00000019265pabpc1b6379.592ENSMMUG00000009740-9879.592Macaca_mulatta
ENSSPAG00000019265pabpc1b6379.592ENSMNEG00000037732-9879.592Macaca_nemestrina
ENSSPAG00000019265pabpc1b6379.592ENSMLEG00000027495-9879.592Mandrillus_leucophaeus
ENSSPAG00000019265pabpc1b10097.161ENSMAMG00000014610pabpc1b10097.161Mastacembelus_armatus
ENSSPAG00000019265pabpc1b10089.796ENSMAMG00000004502-10090.160Mastacembelus_armatus
ENSSPAG00000019265pabpc1b10096.530ENSMZEG00005026745pabpc1b10096.530Maylandia_zebra
ENSSPAG00000019265pabpc1b10090.909ENSMZEG00005025416pabpc1a10091.304Maylandia_zebra
ENSSPAG00000019265pabpc1b6379.592ENSMICG00000047642-9879.592Microcebus_murinus
ENSSPAG00000019265pabpc1b10089.765ENSMMOG00000018009pabpc1b10089.765Mola_mola
ENSSPAG00000019265pabpc1b10088.941ENSMMOG00000018044pabpc1a10090.826Mola_mola
ENSSPAG00000019265pabpc1b9967.247ENSMODG00000015024-9967.247Monodelphis_domestica
ENSSPAG00000019265pabpc1b9874.199ENSMODG00000013156-9874.204Monodelphis_domestica
ENSSPAG00000019265pabpc1b10089.796ENSMALG00000013020-10090.125Monopterus_albus
ENSSPAG00000019265pabpc1b10097.260ENSMALG00000006066pabpc1b10097.260Monopterus_albus
ENSSPAG00000019265pabpc1b6381.421ENSNGAG00000012688-9878.061Nannospalax_galili
ENSSPAG00000019265pabpc1b10096.372ENSNBRG00000013737pabpc1b10096.372Neolamprologus_brichardi
ENSSPAG00000019265pabpc1b10091.066ENSNBRG00000003068-10091.304Neolamprologus_brichardi
ENSSPAG00000019265pabpc1b6379.592ENSNLEG00000018128-9879.592Nomascus_leucogenys
ENSSPAG00000019265pabpc1b6379.082ENSODEG00000018540-9879.082Octodon_degus
ENSSPAG00000019265pabpc1b10096.530ENSONIG00000002717pabpc1b10096.530Oreochromis_niloticus
ENSSPAG00000019265pabpc1b10090.752ENSONIG00000006871-10090.439Oreochromis_niloticus
ENSSPAG00000019265pabpc1b6579.592ENSOCUG00000002565-9879.592Oryctolagus_cuniculus
ENSSPAG00000019265pabpc1b10087.855ENSORLG00000003008-10087.697Oryzias_latipes
ENSSPAG00000019265pabpc1b9993.587ENSORLG00000002691pabpc1a9693.587Oryzias_latipes
ENSSPAG00000019265pabpc1b10087.697ENSORLG00020022259-10087.539Oryzias_latipes_hni
ENSSPAG00000019265pabpc1b10089.168ENSORLG00020022398pabpc1a10089.498Oryzias_latipes_hni
ENSSPAG00000019265pabpc1b10088.170ENSORLG00015010932-10088.013Oryzias_latipes_hsok
ENSSPAG00000019265pabpc1b10089.011ENSORLG00015013633pabpc110089.342Oryzias_latipes_hsok
ENSSPAG00000019265pabpc1b10089.639ENSOMEG00000020219pabpc1a10089.969Oryzias_melastigma
ENSSPAG00000019265pabpc1b9982.098ENSOMEG00000013627pabpc1b10084.668Oryzias_melastigma
ENSSPAG00000019265pabpc1b6579.592ENSOGAG00000029513-9879.592Otolemur_garnettii
ENSSPAG00000019265pabpc1b6579.592ENSOGAG00000026047-9879.592Otolemur_garnettii
ENSSPAG00000019265pabpc1b6579.592ENSOARG00000005943-9879.592Ovis_aries
ENSSPAG00000019265pabpc1b6379.592ENSPPAG00000012920-9879.592Pan_paniscus
ENSSPAG00000019265pabpc1b6579.592ENSPPRG00000011809-9879.592Panthera_pardus
ENSSPAG00000019265pabpc1b6579.592ENSPPRG00000011804-9879.592Panthera_pardus
ENSSPAG00000019265pabpc1b6379.592ENSPTRG00000028252-9879.592Pan_troglodytes
ENSSPAG00000019265pabpc1b6379.592ENSPANG00000011549-9879.592Papio_anubis
ENSSPAG00000019265pabpc1b10096.220ENSPKIG00000005676pabpc1b10096.220Paramormyrops_kingsleyae
ENSSPAG00000019265pabpc1b7894.420ENSPMGG00000023134-9794.420Periophthalmus_magnuspinnatus
ENSSPAG00000019265pabpc1b7792.825ENSPMGG00000022487pabpc1a9292.825Periophthalmus_magnuspinnatus
ENSSPAG00000019265pabpc1b9971.542ENSPCIG00000016995-5571.542Phascolarctos_cinereus
ENSSPAG00000019265pabpc1b10088.769ENSPFOG00000010815pabpc1a10088.923Poecilia_formosa
ENSSPAG00000019265pabpc1b10095.741ENSPFOG00000005917pabpc1b10095.741Poecilia_formosa
ENSSPAG00000019265pabpc1b10090.439ENSPLAG00000004114pabpc1a10090.596Poecilia_latipinna
ENSSPAG00000019265pabpc1b10096.057ENSPLAG00000001388pabpc1b10096.057Poecilia_latipinna
ENSSPAG00000019265pabpc1b10090.439ENSPMEG00000001334pabpc1a10090.596Poecilia_mexicana
ENSSPAG00000019265pabpc1b10095.741ENSPMEG00000014399pabpc1b10095.741Poecilia_mexicana
ENSSPAG00000019265pabpc1b10096.057ENSPREG00000010911pabpc1b10096.057Poecilia_reticulata
ENSSPAG00000019265pabpc1b10089.899ENSPREG00000019595pabpc1a10090.847Poecilia_reticulata
ENSSPAG00000019265pabpc1b6579.592ENSPPYG00000020468-9879.592Pongo_abelii
ENSSPAG00000019265pabpc1b6579.592ENSPCAG00000005308-9879.592Procavia_capensis
ENSSPAG00000019265pabpc1b6379.082ENSPCOG00000026349-9879.082Propithecus_coquereli
ENSSPAG00000019265pabpc1b6580.000ENSPVAG00000016117-9880.000Pteropus_vampyrus
ENSSPAG00000019265pabpc1b10090.909ENSPNYG00000005192pabpc1a10090.596Pundamilia_nyererei
ENSSPAG00000019265pabpc1b10096.530ENSPNYG00000012578pabpc1b10096.530Pundamilia_nyererei
ENSSPAG00000019265pabpc1b10091.195ENSPNAG00000028408pabpc1a10091.038Pygocentrus_nattereri
ENSSPAG00000019265pabpc1b10094.961ENSPNAG00000024626pabpc1b10094.961Pygocentrus_nattereri
ENSSPAG00000019265pabpc1b6379.592ENSRBIG00000027173-9879.592Rhinopithecus_bieti
ENSSPAG00000019265pabpc1b9190.398ENSRBIG00000028738-9590.398Rhinopithecus_bieti
ENSSPAG00000019265pabpc1b6379.592ENSRROG00000017404-9879.592Rhinopithecus_roxellana
ENSSPAG00000019265pabpc1b9863.782ENSSHAG00000000511-10063.782Sarcophilus_harrisii
ENSSPAG00000019265pabpc1b7680.347ENSSFOG00015019668-9180.347Scleropages_formosus
ENSSPAG00000019265pabpc1b10095.426ENSSFOG00015002752-10095.426Scleropages_formosus
ENSSPAG00000019265pabpc1b10091.181ENSSFOG00015006662pabpc1a10091.181Scleropages_formosus
ENSSPAG00000019265pabpc1b10096.530ENSSMAG00000006869pabpc1b10096.530Scophthalmus_maximus
ENSSPAG00000019265pabpc1b10090.439ENSSMAG00000010803pabpc1a10090.439Scophthalmus_maximus
ENSSPAG00000019265pabpc1b10090.909ENSSDUG00000006675pabpc1a10090.909Seriola_dumerili
ENSSPAG00000019265pabpc1b10096.209ENSSDUG00000011965pabpc1b10096.209Seriola_dumerili
ENSSPAG00000019265pabpc1b10097.962ENSSLDG00000014156pabpc1b10097.962Seriola_lalandi_dorsalis
ENSSPAG00000019265pabpc1b10090.909ENSSLDG00000011661pabpc1a10090.909Seriola_lalandi_dorsalis
ENSSPAG00000019265pabpc1b6379.592ENSSSCG00000032167-9879.592Sus_scrofa
ENSSPAG00000019265pabpc1b6379.592ENSSSCG00000036336-9879.592Sus_scrofa
ENSSPAG00000019265pabpc1b10090.125ENSTRUG00000011577-10090.125Takifugu_rubripes
ENSSPAG00000019265pabpc1b10091.654ENSTRUG00000003767-10091.496Takifugu_rubripes
ENSSPAG00000019265pabpc1b10087.017ENSTNIG00000013307pabpc1a10087.017Tetraodon_nigroviridis
ENSSPAG00000019265pabpc1b10091.536ENSTNIG00000009153pabpc1b10091.379Tetraodon_nigroviridis
ENSSPAG00000019265pabpc1b6579.592ENSTTRG00000013181-9879.592Tursiops_truncatus
ENSSPAG00000019265pabpc1b6379.592ENSUAMG00000008089-9879.592Ursus_americanus
ENSSPAG00000019265pabpc1b9753.583ENSUMAG00000023926-8967.403Ursus_maritimus
ENSSPAG00000019265pabpc1b6379.592ENSUMAG00000003364-9879.592Ursus_maritimus
ENSSPAG00000019265pabpc1b6478.500ENSVVUG00000015892-9778.500Vulpes_vulpes
ENSSPAG00000019265pabpc1b9946.050ENSXETG00000015439-10046.050Xenopus_tropicalis
ENSSPAG00000019265pabpc1b10086.730ENSXCOG00000017066pabpc1a10087.046Xiphophorus_couchianus
ENSSPAG00000019265pabpc1b10092.434ENSXCOG00000019901pabpc1b10092.434Xiphophorus_couchianus
ENSSPAG00000019265pabpc1b10095.899ENSXMAG00000003753pabpc1b10095.899Xiphophorus_maculatus
ENSSPAG00000019265pabpc1b10090.282ENSXMAG00000002555pabpc1a10090.439Xiphophorus_maculatus

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