EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000019433 (Gene tree)
Gene ID: 103353744
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 9770 bases
Position: chrKK580153.1:208405-218174
Accession: 103353744
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000025757	RRM_1	PF00076.22	2.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000026180	SCAF8-201	4098	XM_008276865	ENSSPAP00000025757	1365 (aa)	XP_008275087	-

Gene Model

Click here to download ENSSPAG00000019433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000019433's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000019433	SCAF8	57	72.000	ENSCAPG00000003300	SCAF8	71	72.000	Cavia_aperea
ENSSPAG00000019433	SCAF8	74	57.895	ENSCPOG00000030311	-	55	52.703	Cavia_porcellus
ENSSPAG00000019433	SCAF8	69	69.804	ENSCVAG00000000925	SCAF8	68	69.907	Cyprinodon_variegatus
ENSSPAG00000019433	SCAF8	69	70.885	ENSGAFG00000018033	SCAF8	67	71.091	Gambusia_affinis
ENSSPAG00000019433	SCAF8	69	90.504	ENSGACG00000006909	SCAF8	89	91.691	Gasterosteus_aculeatus
ENSSPAG00000019433	SCAF8	69	74.827	ENSLBEG00000012484	-	71	74.926	Labrus_bergylta
ENSSPAG00000019433	SCAF8	69	79.585	ENSMAMG00000009457	SCAF8	70	80.207	Mastacembelus_armatus
ENSSPAG00000019433	SCAF8	69	78.229	ENSMMOG00000002216	SCAF8	68	77.812	Mola_mola
ENSSPAG00000019433	SCAF8	69	76.962	ENSMALG00000011584	SCAF8	67	77.982	Monopterus_albus
ENSSPAG00000019433	SCAF8	74	64.834	MGP_CAROLIEiJ_G0021016	Scaf8	50	59.322	Mus_caroli
ENSSPAG00000019433	SCAF8	74	64.834	ENSMUSG00000046201	Scaf8	50	59.322	Mus_musculus
ENSSPAG00000019433	SCAF8	52	92.593	ENSOPRG00000018413	-	68	92.593	Ochotona_princeps
ENSSPAG00000019433	SCAF8	74	63.846	ENSPTIG00000014836	SCAF8	80	62.996	Panthera_tigris_altaica
ENSSPAG00000019433	SCAF8	53	94.643	ENSPFOG00000004176	SCAF8	58	94.643	Poecilia_formosa
ENSSPAG00000019433	SCAF8	52	78.386	ENSPMEG00000007591	SCAF8	58	78.610	Poecilia_mexicana
ENSSPAG00000019433	SCAF8	74	63.077	ENSRBIG00000035769	SCAF8	80	62.996	Rhinopithecus_bieti
ENSSPAG00000019433	SCAF8	73	64.531	ENSSFOG00015009481	SCAF8	93	64.996	Scleropages_formosus