EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000019502 (Gene tree)
Gene ID: 103364727
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 8958 bases
Position: chrKK580844.1:14774-23731
Accession: 103364727
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000025863	PRP4	PF08799.11	2.5e-13	1	1
ENSSPAP00000025847	PRP4	PF08799.11	2.6e-13	1	1
ENSSPAP00000025863	Prp18	PF02840.15	4.9e-62	1	1
ENSSPAP00000025847	Prp18	PF02840.15	5e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000026272	-	2373	XM_008291951	ENSSPAP00000025847	350 (aa)	XP_008290173	UPI00049675A7
ENSSPAT00000026288	-	2346	XM_008291953	ENSSPAP00000025863	341 (aa)	XP_008290175	UPI00049533E4

Gene Model

Click here to download ENSSPAG00000019502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000019502's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000019502	prpf18	100	84.795	ENSG00000165630	PRPF18	100	84.795	Homo_sapiens
ENSSPAG00000019502	prpf18	100	98.286	ENSAPOG00000024177	prpf18	100	98.286	Acanthochromis_polyacanthus
ENSSPAG00000019502	prpf18	100	84.211	ENSAMEG00000013591	-	100	84.211	Ailuropoda_melanoleuca
ENSSPAG00000019502	prpf18	100	95.308	ENSACIG00000001186	prpf18	100	95.308	Amphilophus_citrinellus
ENSSPAG00000019502	prpf18	98	98.204	ENSAOCG00000006572	prpf18	94	97.953	Amphiprion_ocellaris
ENSSPAG00000019502	prpf18	100	98.240	ENSAPEG00000004564	prpf18	100	98.240	Amphiprion_percula
ENSSPAG00000019502	prpf18	100	97.361	ENSATEG00000000303	prpf18	100	97.361	Anabas_testudineus
ENSSPAG00000019502	prpf18	99	82.353	ENSAPLG00000003387	-	99	82.353	Anas_platyrhynchos
ENSSPAG00000019502	prpf18	100	84.302	ENSACAG00000000818	-	100	84.302	Anolis_carolinensis
ENSSPAG00000019502	prpf18	100	84.795	ENSANAG00000037445	-	100	84.795	Aotus_nancymaae
ENSSPAG00000019502	prpf18	100	94.428	ENSACLG00000026296	prpf18	100	94.428	Astatotilapia_calliptera
ENSSPAG00000019502	prpf18	100	89.714	ENSAMXG00000012848	prpf18	100	89.714	Astyanax_mexicanus
ENSSPAG00000019502	prpf18	100	83.918	ENSBTAG00000017244	PRPF18	100	83.918	Bos_taurus
ENSSPAG00000019502	prpf18	98	39.943	WBGene00009320	F32B6.3	97	39.193	Caenorhabditis_elegans
ENSSPAG00000019502	prpf18	100	84.795	ENSCJAG00000009432	-	100	84.795	Callithrix_jacchus
ENSSPAG00000019502	prpf18	100	84.211	ENSCAFG00000004735	-	100	84.211	Canis_familiaris
ENSSPAG00000019502	prpf18	100	84.211	ENSCAFG00020007712	-	100	84.211	Canis_lupus_dingo
ENSSPAG00000019502	prpf18	100	83.918	ENSCHIG00000000499	-	100	83.918	Capra_hircus
ENSSPAG00000019502	prpf18	100	84.211	ENSTSYG00000003517	-	100	84.211	Carlito_syrichta
ENSSPAG00000019502	prpf18	100	84.795	ENSCPOG00000021069	-	100	84.795	Cavia_porcellus
ENSSPAG00000019502	prpf18	100	84.795	ENSCCAG00000036822	-	100	84.795	Cebus_capucinus
ENSSPAG00000019502	prpf18	100	73.977	ENSCATG00000016633	-	100	73.977	Cercocebus_atys
ENSSPAG00000019502	prpf18	100	84.211	ENSCLAG00000011770	-	100	84.211	Chinchilla_lanigera
ENSSPAG00000019502	prpf18	100	83.191	ENSCSAG00000013109	-	100	83.191	Chlorocebus_sabaeus
ENSSPAG00000019502	prpf18	100	80.337	ENSCPBG00000003100	-	100	81.180	Chrysemys_picta_bellii
ENSSPAG00000019502	prpf18	99	55.294	ENSCING00000020481	-	97	55.294	Ciona_intestinalis
ENSSPAG00000019502	prpf18	99	55.394	ENSCSAVG00000010546	-	99	55.102	Ciona_savignyi
ENSSPAG00000019502	prpf18	100	84.795	ENSCANG00000034900	-	100	84.795	Colobus_angolensis_palliatus
ENSSPAG00000019502	prpf18	100	84.211	ENSCGRG00001023665	Prpf18	100	84.211	Cricetulus_griseus_chok1gshd
ENSSPAG00000019502	prpf18	100	84.211	ENSCGRG00000014690	Prpf18	100	84.211	Cricetulus_griseus_crigri
ENSSPAG00000019502	prpf18	100	92.669	ENSCSEG00000005536	prpf18	99	92.669	Cynoglossus_semilaevis
ENSSPAG00000019502	prpf18	100	93.548	ENSCVAG00000012401	prpf18	100	93.548	Cyprinodon_variegatus
ENSSPAG00000019502	prpf18	100	90.058	ENSDARG00000058306	prpf18	100	90.058	Danio_rerio
ENSSPAG00000019502	prpf18	100	84.503	ENSDNOG00000035607	-	100	84.503	Dasypus_novemcinctus
ENSSPAG00000019502	prpf18	100	83.918	ENSDORG00000000858	Prpf18	100	83.918	Dipodomys_ordii
ENSSPAG00000019502	prpf18	99	52.663	FBgn0027784	Prp18	98	51.775	Drosophila_melanogaster
ENSSPAG00000019502	prpf18	100	76.316	ENSETEG00000015060	-	100	76.316	Echinops_telfairi
ENSSPAG00000019502	prpf18	100	69.741	ENSEBUG00000016502	prpf18	99	68.876	Eptatretus_burgeri
ENSSPAG00000019502	prpf18	100	84.503	ENSEASG00005019373	-	100	84.503	Equus_asinus_asinus
ENSSPAG00000019502	prpf18	100	84.503	ENSECAG00000006997	PRPF18	100	84.503	Equus_caballus
ENSSPAG00000019502	prpf18	92	51.266	ENSEEUG00000001171	-	100	51.266	Erinaceus_europaeus
ENSSPAG00000019502	prpf18	100	89.504	ENSELUG00000022190	prpf18	100	89.504	Esox_lucius
ENSSPAG00000019502	prpf18	100	83.918	ENSFCAG00000004436	-	100	83.918	Felis_catus
ENSSPAG00000019502	prpf18	93	80.000	ENSFALG00000001912	-	97	80.308	Ficedula_albicollis
ENSSPAG00000019502	prpf18	94	86.562	ENSFDAG00000014026	-	100	86.562	Fukomys_damarensis
ENSSPAG00000019502	prpf18	99	57.971	ENSFDAG00000010713	-	97	57.971	Fukomys_damarensis
ENSSPAG00000019502	prpf18	80	95.238	ENSFHEG00000020125	prpf18	98	95.131	Fundulus_heteroclitus
ENSSPAG00000019502	prpf18	99	89.118	ENSGMOG00000012210	prpf18	99	89.118	Gadus_morhua
ENSSPAG00000019502	prpf18	100	83.333	ENSGALG00000043593	-	100	83.333	Gallus_gallus
ENSSPAG00000019502	prpf18	100	93.255	ENSGAFG00000006034	prpf18	100	93.255	Gambusia_affinis
ENSSPAG00000019502	prpf18	100	92.962	ENSGACG00000012232	prpf18	100	92.962	Gasterosteus_aculeatus
ENSSPAG00000019502	prpf18	100	83.918	ENSGAGG00000016878	-	100	83.918	Gopherus_agassizii
ENSSPAG00000019502	prpf18	92	83.861	ENSGGOG00000025188	-	96	83.861	Gorilla_gorilla
ENSSPAG00000019502	prpf18	100	94.571	ENSHBUG00000010264	prpf18	100	94.571	Haplochromis_burtoni
ENSSPAG00000019502	prpf18	100	84.211	ENSHGLG00000018534	PRPF18	100	84.211	Heterocephalus_glaber_female
ENSSPAG00000019502	prpf18	94	86.250	ENSHGLG00100012161	-	98	86.250	Heterocephalus_glaber_male
ENSSPAG00000019502	prpf18	100	96.774	ENSHCOG00000015987	prpf18	100	96.774	Hippocampus_comes
ENSSPAG00000019502	prpf18	100	82.720	ENSIPUG00000007432	prpf18	100	83.003	Ictalurus_punctatus
ENSSPAG00000019502	prpf18	100	83.918	ENSSTOG00000008735	-	100	83.918	Ictidomys_tridecemlineatus
ENSSPAG00000019502	prpf18	100	63.265	ENSJJAG00000015191	-	100	63.265	Jaculus_jaculus
ENSSPAG00000019502	prpf18	100	84.795	ENSJJAG00000024041	-	100	84.795	Jaculus_jaculus
ENSSPAG00000019502	prpf18	100	93.255	ENSKMAG00000012124	prpf18	100	93.255	Kryptolebias_marmoratus
ENSSPAG00000019502	prpf18	98	91.369	ENSLBEG00000028466	prpf18	99	91.369	Labrus_bergylta
ENSSPAG00000019502	prpf18	100	84.211	ENSLACG00000009885	prpf18	100	84.503	Latimeria_chalumnae
ENSSPAG00000019502	prpf18	100	88.596	ENSLOCG00000016736	prpf18	100	88.596	Lepisosteus_oculatus
ENSSPAG00000019502	prpf18	100	84.795	ENSLAFG00000007753	-	100	84.795	Loxodonta_africana
ENSSPAG00000019502	prpf18	100	84.795	ENSMFAG00000000540	-	100	84.795	Macaca_fascicularis
ENSSPAG00000019502	prpf18	100	84.795	ENSMMUG00000015071	PRPF18	93	92.053	Macaca_mulatta
ENSSPAG00000019502	prpf18	100	84.795	ENSMNEG00000024679	-	100	84.795	Macaca_nemestrina
ENSSPAG00000019502	prpf18	100	69.591	ENSMLEG00000031715	-	100	69.591	Mandrillus_leucophaeus
ENSSPAG00000019502	prpf18	100	95.714	ENSMAMG00000006610	prpf18	100	95.714	Mastacembelus_armatus
ENSSPAG00000019502	prpf18	100	94.571	ENSMZEG00005019392	prpf18	100	94.571	Maylandia_zebra
ENSSPAG00000019502	prpf18	100	83.333	ENSMGAG00000005023	-	100	83.333	Meleagris_gallopavo
ENSSPAG00000019502	prpf18	100	85.088	ENSMICG00000006572	-	100	85.088	Microcebus_murinus
ENSSPAG00000019502	prpf18	100	84.795	ENSMOCG00000021468	Prpf18	100	84.795	Microtus_ochrogaster
ENSSPAG00000019502	prpf18	100	94.721	ENSMMOG00000013012	prpf18	100	94.721	Mola_mola
ENSSPAG00000019502	prpf18	100	76.901	ENSMODG00000024043	-	100	76.901	Monodelphis_domestica
ENSSPAG00000019502	prpf18	99	78.448	ENSMODG00000016902	-	95	78.448	Monodelphis_domestica
ENSSPAG00000019502	prpf18	100	86.919	ENSMALG00000005486	prpf18	100	86.919	Monopterus_albus
ENSSPAG00000019502	prpf18	100	84.211	MGP_CAROLIEiJ_G0023143	Prpf18	100	95.890	Mus_caroli
ENSSPAG00000019502	prpf18	100	84.503	ENSMUSG00000039449	Prpf18	100	95.890	Mus_musculus
ENSSPAG00000019502	prpf18	100	84.503	MGP_PahariEiJ_G0019203	Prpf18	100	95.890	Mus_pahari
ENSSPAG00000019502	prpf18	100	84.211	MGP_SPRETEiJ_G0024061	Prpf18	100	95.890	Mus_spretus
ENSSPAG00000019502	prpf18	100	83.918	ENSMPUG00000000938	-	100	83.918	Mustela_putorius_furo
ENSSPAG00000019502	prpf18	100	83.918	ENSMLUG00000009200	-	100	83.918	Myotis_lucifugus
ENSSPAG00000019502	prpf18	100	84.795	ENSNGAG00000012500	-	100	84.795	Nannospalax_galili
ENSSPAG00000019502	prpf18	68	82.328	ENSNGAG00000023550	-	82	83.043	Nannospalax_galili
ENSSPAG00000019502	prpf18	100	94.721	ENSNBRG00000001778	prpf18	100	94.721	Neolamprologus_brichardi
ENSSPAG00000019502	prpf18	100	84.795	ENSNLEG00000012186	-	100	84.795	Nomascus_leucogenys
ENSSPAG00000019502	prpf18	76	73.359	ENSMEUG00000005032	-	75	71.815	Notamacropus_eugenii
ENSSPAG00000019502	prpf18	77	65.283	ENSOPRG00000002153	-	100	65.283	Ochotona_princeps
ENSSPAG00000019502	prpf18	100	83.918	ENSODEG00000003770	-	100	83.918	Octodon_degus
ENSSPAG00000019502	prpf18	98	94.910	ENSONIG00000014854	prpf18	96	94.910	Oreochromis_niloticus
ENSSPAG00000019502	prpf18	100	84.795	ENSOANG00000015404	-	100	84.795	Ornithorhynchus_anatinus
ENSSPAG00000019502	prpf18	100	84.503	ENSOCUG00000027756	-	96	85.321	Oryctolagus_cuniculus
ENSSPAG00000019502	prpf18	100	94.000	ENSORLG00000010293	prpf18	100	94.000	Oryzias_latipes
ENSSPAG00000019502	prpf18	100	94.135	ENSORLG00020001530	prpf18	100	94.135	Oryzias_latipes_hni
ENSSPAG00000019502	prpf18	100	93.842	ENSORLG00015013705	prpf18	100	93.842	Oryzias_latipes_hsok
ENSSPAG00000019502	prpf18	100	95.015	ENSOMEG00000009167	prpf18	100	95.015	Oryzias_melastigma
ENSSPAG00000019502	prpf18	100	83.918	ENSOGAG00000007294	-	100	83.918	Otolemur_garnettii
ENSSPAG00000019502	prpf18	100	82.336	ENSOARG00000006243	-	100	82.336	Ovis_aries
ENSSPAG00000019502	prpf18	100	84.795	ENSPPAG00000041959	-	100	84.795	Pan_paniscus
ENSSPAG00000019502	prpf18	100	83.918	ENSPPRG00000000107	-	100	83.918	Panthera_pardus
ENSSPAG00000019502	prpf18	100	83.918	ENSPTIG00000021094	-	100	83.918	Panthera_tigris_altaica
ENSSPAG00000019502	prpf18	100	84.795	ENSPTRG00000002306	PRPF18	100	84.795	Pan_troglodytes
ENSSPAG00000019502	prpf18	100	84.503	ENSPANG00000023346	-	100	84.503	Papio_anubis
ENSSPAG00000019502	prpf18	100	88.034	ENSPKIG00000014128	prpf18	96	88.034	Paramormyrops_kingsleyae
ENSSPAG00000019502	prpf18	100	83.918	ENSPSIG00000016064	-	100	83.918	Pelodiscus_sinensis
ENSSPAG00000019502	prpf18	100	86.550	ENSPMGG00000016486	prpf18	100	86.550	Periophthalmus_magnuspinnatus
ENSSPAG00000019502	prpf18	100	84.503	ENSPEMG00000013704	Prpf18	100	84.503	Peromyscus_maniculatus_bairdii
ENSSPAG00000019502	prpf18	100	74.063	ENSPMAG00000000204	prpf18	100	74.063	Petromyzon_marinus
ENSSPAG00000019502	prpf18	92	84.494	ENSPCIG00000012963	-	99	84.494	Phascolarctos_cinereus
ENSSPAG00000019502	prpf18	100	92.286	ENSPFOG00000017611	prpf18	100	92.286	Poecilia_formosa
ENSSPAG00000019502	prpf18	100	92.669	ENSPLAG00000000369	prpf18	100	92.669	Poecilia_latipinna
ENSSPAG00000019502	prpf18	100	92.962	ENSPMEG00000005183	prpf18	100	92.962	Poecilia_mexicana
ENSSPAG00000019502	prpf18	100	92.669	ENSPREG00000015232	prpf18	100	92.669	Poecilia_reticulata
ENSSPAG00000019502	prpf18	100	84.503	ENSPPYG00000002101	PRPF18	100	84.503	Pongo_abelii
ENSSPAG00000019502	prpf18	100	66.959	ENSPCAG00000010833	-	100	66.959	Procavia_capensis
ENSSPAG00000019502	prpf18	100	80.117	ENSPCOG00000013057	-	100	80.117	Propithecus_coquereli
ENSSPAG00000019502	prpf18	100	51.462	ENSPVAG00000002947	-	100	51.462	Pteropus_vampyrus
ENSSPAG00000019502	prpf18	100	94.286	ENSPNYG00000003554	prpf18	100	94.286	Pundamilia_nyererei
ENSSPAG00000019502	prpf18	100	88.604	ENSPNAG00000023151	prpf18	100	88.604	Pygocentrus_nattereri
ENSSPAG00000019502	prpf18	100	84.211	ENSRNOG00000018396	Prpf18	100	84.211	Rattus_norvegicus
ENSSPAG00000019502	prpf18	100	85.088	ENSRBIG00000028028	-	100	85.088	Rhinopithecus_bieti
ENSSPAG00000019502	prpf18	100	84.795	ENSRROG00000040695	-	100	84.795	Rhinopithecus_roxellana
ENSSPAG00000019502	prpf18	100	84.795	ENSSBOG00000034482	-	100	84.795	Saimiri_boliviensis_boliviensis
ENSSPAG00000019502	prpf18	100	85.380	ENSSHAG00000016463	-	100	85.380	Sarcophilus_harrisii
ENSSPAG00000019502	prpf18	100	71.345	ENSSHAG00000009669	-	100	71.345	Sarcophilus_harrisii
ENSSPAG00000019502	prpf18	77	45.833	ENSSFOG00015021154	-	89	48.498	Scleropages_formosus
ENSSPAG00000019502	prpf18	98	86.087	ENSSFOG00015022118	prpf18	100	80.980	Scleropages_formosus
ENSSPAG00000019502	prpf18	100	93.714	ENSSMAG00000005308	prpf18	100	93.714	Scophthalmus_maximus
ENSSPAG00000019502	prpf18	100	98.571	ENSSDUG00000015428	prpf18	100	98.571	Seriola_dumerili
ENSSPAG00000019502	prpf18	100	98.286	ENSSLDG00000023989	prpf18	100	98.286	Seriola_lalandi_dorsalis
ENSSPAG00000019502	prpf18	100	55.848	ENSSARG00000005307	-	100	55.848	Sorex_araneus
ENSSPAG00000019502	prpf18	100	83.918	ENSSPUG00000002619	-	100	83.918	Sphenodon_punctatus
ENSSPAG00000019502	prpf18	100	84.211	ENSSSCG00000026354	-	100	84.211	Sus_scrofa
ENSSPAG00000019502	prpf18	100	83.041	ENSTGUG00000002286	-	100	83.041	Taeniopygia_guttata
ENSSPAG00000019502	prpf18	100	89.736	ENSTRUG00000011278	prpf18	100	89.736	Takifugu_rubripes
ENSSPAG00000019502	prpf18	100	90.909	ENSTNIG00000000911	prpf18	100	90.909	Tetraodon_nigroviridis
ENSSPAG00000019502	prpf18	79	98.718	ENSTBEG00000013011	-	79	98.718	Tupaia_belangeri
ENSSPAG00000019502	prpf18	100	85.088	ENSTTRG00000011117	PRPF18	100	85.088	Tursiops_truncatus
ENSSPAG00000019502	prpf18	91	87.460	ENSUAMG00000001815	-	93	87.460	Ursus_americanus
ENSSPAG00000019502	prpf18	100	79.532	ENSUMAG00000012329	-	100	79.532	Ursus_maritimus
ENSSPAG00000019502	prpf18	100	78.655	ENSVPAG00000011486	-	100	78.655	Vicugna_pacos
ENSSPAG00000019502	prpf18	100	84.211	ENSVVUG00000005453	-	100	84.211	Vulpes_vulpes
ENSSPAG00000019502	prpf18	100	75.942	ENSXETG00000024057	prpf18	100	75.652	Xenopus_tropicalis
ENSSPAG00000019502	prpf18	100	93.003	ENSXCOG00000020414	prpf18	100	93.003	Xiphophorus_couchianus
ENSSPAG00000019502	prpf18	100	93.548	ENSXMAG00000004713	prpf18	91	93.548	Xiphophorus_maculatus