EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000019854 (Gene tree)
Gene ID: 103366198
Gene Symbol: -
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 2280 bases
Position: chrKK580091.1:1334211-1336490
Accession: 103366198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000026349	zf-U11-48K	PF05253.12	8.3e-18	1	2
ENSSPAP00000026349	zf-U11-48K	PF05253.12	8.3e-18	2	2
ENSSPAP00000026334	zf-U11-48K	PF05253.12	1.3e-17	1	2
ENSSPAP00000026334	zf-U11-48K	PF05253.12	1.3e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000026765	-	513	XM_008293860	ENSSPAP00000026334	170 (aa)	XP_008292082	-
ENSSPAT00000026780	-	444	-	ENSSPAP00000026349	147 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000019854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000019854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000019854	-	86	59.868	ENSSPAG00000010005	-	97	59.868

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000019854	-	98	59.195	ENSAPOG00000021951	-	98	57.471	Acanthochromis_polyacanthus
ENSSPAG00000019854	-	81	75.912	ENSAPOG00000000311	-	80	75.912	Acanthochromis_polyacanthus
ENSSPAG00000019854	-	98	65.294	ENSACIG00000013400	zgc:56699	95	65.734	Amphilophus_citrinellus
ENSSPAG00000019854	-	99	62.069	ENSAOCG00000013650	-	99	60.920	Amphiprion_ocellaris
ENSSPAG00000019854	-	99	60.811	ENSAPEG00000006689	zgc:56699	98	58.784	Amphiprion_percula
ENSSPAG00000019854	-	98	72.832	ENSATEG00000024058	zgc:56699	96	70.520	Anabas_testudineus
ENSSPAG00000019854	-	99	64.607	ENSACLG00000023562	zgc:56699	91	63.483	Astatotilapia_calliptera
ENSSPAG00000019854	-	98	57.062	ENSAMXG00000038346	zgc:56699	80	61.806	Astyanax_mexicanus
ENSSPAG00000019854	-	99	45.251	ENSAMXG00000036095	-	61	52.740	Astyanax_mexicanus
ENSSPAG00000019854	-	98	62.069	ENSCSEG00000021520	zgc:56699	82	59.770	Cynoglossus_semilaevis
ENSSPAG00000019854	-	80	61.029	ENSCVAG00000009972	zgc:56699	73	61.029	Cyprinodon_variegatus
ENSSPAG00000019854	-	98	50.829	ENSDARG00000000887	zgc:56699	99	49.171	Danio_rerio
ENSSPAG00000019854	-	80	51.701	ENSDARG00000099586	CR382383.2	81	51.701	Danio_rerio
ENSSPAG00000019854	-	66	45.690	ENSEBUG00000005577	-	60	45.217	Eptatretus_burgeri
ENSSPAG00000019854	-	98	55.556	ENSELUG00000003242	gtsf1	79	63.889	Esox_lucius
ENSSPAG00000019854	-	98	63.584	ENSFHEG00000006036	zgc:56699	95	62.759	Fundulus_heteroclitus
ENSSPAG00000019854	-	80	66.102	ENSGMOG00000007295	zgc:56699	93	67.257	Gadus_morhua
ENSSPAG00000019854	-	69	41.803	ENSGALG00000035365	-	69	41.803	Gallus_gallus
ENSSPAG00000019854	-	98	63.793	ENSGAFG00000020743	zgc:56699	97	63.218	Gambusia_affinis
ENSSPAG00000019854	-	98	63.429	ENSHBUG00000005327	zgc:56699	95	63.743	Haplochromis_burtoni
ENSSPAG00000019854	-	98	50.568	ENSHCOG00000010296	-	100	50.000	Hippocampus_comes
ENSSPAG00000019854	-	99	49.438	ENSIPUG00000011498	zgc:56699	96	48.315	Ictalurus_punctatus
ENSSPAG00000019854	-	98	67.836	ENSLBEG00000015981	zgc:56699	99	67.133	Labrus_bergylta
ENSSPAG00000019854	-	80	49.645	ENSLOCG00000004469	zgc:56699	97	49.645	Lepisosteus_oculatus
ENSSPAG00000019854	-	98	61.047	ENSMAMG00000001846	zgc:56699	97	61.047	Mastacembelus_armatus
ENSSPAG00000019854	-	99	64.607	ENSMZEG00005026479	zgc:56699	91	63.483	Maylandia_zebra
ENSSPAG00000019854	-	81	58.696	ENSMMOG00000017331	zgc:56699	75	58.696	Mola_mola
ENSSPAG00000019854	-	98	63.429	ENSNBRG00000006336	zgc:56699	97	62.286	Neolamprologus_brichardi
ENSSPAG00000019854	-	99	64.607	ENSONIG00000016720	zgc:56699	91	63.483	Oreochromis_niloticus
ENSSPAG00000019854	-	65	40.000	ENSOANG00000030381	-	74	40.000	Ornithorhynchus_anatinus
ENSSPAG00000019854	-	96	57.229	ENSORLG00000015258	-	95	56.627	Oryzias_latipes
ENSSPAG00000019854	-	74	61.905	ENSORLG00000025877	-	69	64.912	Oryzias_latipes
ENSSPAG00000019854	-	96	57.229	ENSORLG00020010990	-	95	56.627	Oryzias_latipes_hni
ENSSPAG00000019854	-	74	61.905	ENSORLG00020011013	-	69	64.912	Oryzias_latipes_hni
ENSSPAG00000019854	-	96	56.627	ENSORLG00015004961	zgc:56699	95	56.024	Oryzias_latipes_hsok
ENSSPAG00000019854	-	80	55.882	ENSOMEG00000013200	-	88	55.882	Oryzias_melastigma
ENSSPAG00000019854	-	96	59.394	ENSOMEG00000021739	-	95	58.788	Oryzias_melastigma
ENSSPAG00000019854	-	98	55.491	ENSOMEG00000021773	-	78	62.411	Oryzias_melastigma
ENSSPAG00000019854	-	98	51.977	ENSPKIG00000017039	zgc:56699	99	49.718	Paramormyrops_kingsleyae
ENSSPAG00000019854	-	98	65.068	ENSPMGG00000023241	zgc:56699	97	65.068	Periophthalmus_magnuspinnatus
ENSSPAG00000019854	-	65	45.833	ENSPMAG00000009653	-	95	40.650	Petromyzon_marinus
ENSSPAG00000019854	-	52	38.961	ENSPCIG00000006734	-	96	38.961	Phascolarctos_cinereus
ENSSPAG00000019854	-	98	63.218	ENSPFOG00000009204	zgc:56699	97	63.218	Poecilia_formosa
ENSSPAG00000019854	-	98	64.384	ENSPLAG00000009088	zgc:56699	97	64.384	Poecilia_latipinna
ENSSPAG00000019854	-	98	63.218	ENSPMEG00000001443	zgc:56699	97	63.218	Poecilia_mexicana
ENSSPAG00000019854	-	98	64.626	ENSPREG00000000745	zgc:56699	97	63.946	Poecilia_reticulata
ENSSPAG00000019854	-	98	64.000	ENSPNYG00000002811	zgc:56699	97	62.857	Pundamilia_nyererei
ENSSPAG00000019854	-	98	57.542	ENSPNAG00000005165	zgc:56699	79	66.434	Pygocentrus_nattereri
ENSSPAG00000019854	-	88	54.839	ENSSFOG00015021600	zgc:56699	79	57.042	Scleropages_formosus
ENSSPAG00000019854	-	98	64.912	ENSSMAG00000020886	zgc:56699	96	64.912	Scophthalmus_maximus
ENSSPAG00000019854	-	97	70.349	ENSSDUG00000002033	zgc:56699	96	69.767	Seriola_dumerili
ENSSPAG00000019854	-	97	69.767	ENSSLDG00000014113	zgc:56699	96	69.186	Seriola_lalandi_dorsalis
ENSSPAG00000019854	-	97	53.801	ENSTRUG00000015537	zgc:56699	79	58.865	Takifugu_rubripes
ENSSPAG00000019854	-	82	55.634	ENSTNIG00000012515	zgc:56699	94	47.482	Tetraodon_nigroviridis
ENSSPAG00000019854	-	99	61.176	ENSXCOG00000014400	zgc:56699	87	61.176	Xiphophorus_couchianus
ENSSPAG00000019854	-	98	63.793	ENSXMAG00000011692	zgc:56699	97	63.793	Xiphophorus_maculatus