EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000019871 (Gene tree)
Gene ID: 103369888
Gene Symbol: rbm42
Alias: mgc10433l|zgc:109907
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 9143 bases
Position: chrKK581417.1:33800-42942
Accession: 103369888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000026331	RRM_1	PF00076.22	7.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000026762	-	3074	XM_008298729	ENSSPAP00000026331	406 (aa)	XP_008296951	UPI0004962C22

Gene Model

Click here to download ENSSPAG00000019871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000019871's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000019871	rbm42	100	97.044	ENSAPOG00000015109	rbm42	100	97.044	Acanthochromis_polyacanthus
ENSSPAG00000019871	rbm42	100	83.251	ENSACIG00000010771	rbm42	100	83.251	Amphilophus_citrinellus
ENSSPAG00000019871	rbm42	100	97.044	ENSAOCG00000008873	rbm42	100	97.044	Amphiprion_ocellaris
ENSSPAG00000019871	rbm42	100	97.044	ENSAPEG00000012051	rbm42	99	97.044	Amphiprion_percula
ENSSPAG00000019871	rbm42	100	86.946	ENSATEG00000000536	rbm42	100	86.946	Anabas_testudineus
ENSSPAG00000019871	rbm42	100	87.685	ENSACLG00000004988	rbm42	100	87.961	Astatotilapia_calliptera
ENSSPAG00000019871	rbm42	100	73.798	ENSAMXG00000016545	rbm42	100	74.279	Astyanax_mexicanus
ENSSPAG00000019871	rbm42	97	82.368	ENSCSEG00000010248	rbm42	100	83.375	Cynoglossus_semilaevis
ENSSPAG00000019871	rbm42	100	81.951	ENSCVAG00000015589	rbm42	100	81.220	Cyprinodon_variegatus
ENSSPAG00000019871	rbm42	100	67.062	ENSDARG00000039910	rbm42	100	70.631	Danio_rerio
ENSSPAG00000019871	rbm42	100	72.235	ENSELUG00000022403	rbm42	100	72.170	Esox_lucius
ENSSPAG00000019871	rbm42	65	79.487	ENSFHEG00000006764	rbm42	100	79.734	Fundulus_heteroclitus
ENSSPAG00000019871	rbm42	100	72.816	ENSGMOG00000012660	rbm42	100	72.573	Gadus_morhua
ENSSPAG00000019871	rbm42	76	78.526	ENSGAFG00000009059	rbm42	99	79.935	Gambusia_affinis
ENSSPAG00000019871	rbm42	100	84.236	ENSGACG00000004170	rbm42	100	83.744	Gasterosteus_aculeatus
ENSSPAG00000019871	rbm42	100	87.685	ENSHBUG00000011141	rbm42	100	87.685	Haplochromis_burtoni
ENSSPAG00000019871	rbm42	100	80.392	ENSHCOG00000021214	rbm42	100	79.657	Hippocampus_comes
ENSSPAG00000019871	rbm42	100	73.159	ENSIPUG00000022365	rbm42	99	72.143	Ictalurus_punctatus
ENSSPAG00000019871	rbm42	91	80.323	ENSKMAG00000015287	rbm42	99	80.054	Kryptolebias_marmoratus
ENSSPAG00000019871	rbm42	100	83.374	ENSLBEG00000017547	rbm42	100	83.374	Labrus_bergylta
ENSSPAG00000019871	rbm42	84	83.237	ENSLBEG00000004578	-	96	83.237	Labrus_bergylta
ENSSPAG00000019871	rbm42	100	67.612	ENSLOCG00000003368	rbm42	100	68.009	Lepisosteus_oculatus
ENSSPAG00000019871	rbm42	100	89.655	ENSMAMG00000006708	rbm42	100	89.655	Mastacembelus_armatus
ENSSPAG00000019871	rbm42	100	87.685	ENSMZEG00005025234	rbm42	100	87.961	Maylandia_zebra
ENSSPAG00000019871	rbm42	91	88.618	ENSMALG00000015720	rbm42	100	88.618	Monopterus_albus
ENSSPAG00000019871	rbm42	100	87.531	ENSONIG00000008029	rbm42	100	87.531	Oreochromis_niloticus
ENSSPAG00000019871	rbm42	100	63.658	ENSORLG00020022507	rbm42	100	60.599	Oryzias_latipes_hni
ENSSPAG00000019871	rbm42	100	82.266	ENSORLG00015000659	rbm42	100	82.266	Oryzias_latipes_hsok
ENSSPAG00000019871	rbm42	59	84.362	ENSOMEG00000014332	rbm42	96	81.081	Oryzias_melastigma
ENSSPAG00000019871	rbm42	100	74.038	ENSPKIG00000015165	rbm42	100	72.771	Paramormyrops_kingsleyae
ENSSPAG00000019871	rbm42	93	66.544	ENSPMGG00000003569	rbm42	100	98.571	Periophthalmus_magnuspinnatus
ENSSPAG00000019871	rbm42	52	57.078	ENSPMAG00000008633	rbm42	100	49.206	Petromyzon_marinus
ENSSPAG00000019871	rbm42	100	79.854	ENSPFOG00000007701	rbm42	100	81.220	Poecilia_formosa
ENSSPAG00000019871	rbm42	100	79.854	ENSPLAG00000009405	rbm42	100	80.976	Poecilia_latipinna
ENSSPAG00000019871	rbm42	100	80.244	ENSPMEG00000010375	rbm42	100	81.463	Poecilia_mexicana
ENSSPAG00000019871	rbm42	100	80.097	ENSPREG00000018102	rbm42	100	81.463	Poecilia_reticulata
ENSSPAG00000019871	rbm42	100	87.438	ENSPNYG00000014460	rbm42	100	87.715	Pundamilia_nyererei
ENSSPAG00000019871	rbm42	100	74.822	ENSPNAG00000009961	rbm42	100	72.406	Pygocentrus_nattereri
ENSSPAG00000019871	rbm42	100	72.706	ENSSFOG00015019227	rbm42	100	72.986	Scleropages_formosus
ENSSPAG00000019871	rbm42	100	87.224	ENSSMAG00000011935	rbm42	100	86.241	Scophthalmus_maximus
ENSSPAG00000019871	rbm42	100	90.887	ENSSDUG00000004033	rbm42	100	90.887	Seriola_dumerili
ENSSPAG00000019871	rbm42	100	79.310	ENSSLDG00000009918	rbm42	100	95.238	Seriola_lalandi_dorsalis
ENSSPAG00000019871	rbm42	100	79.803	ENSTRUG00000024586	-	76	78.818	Takifugu_rubripes
ENSSPAG00000019871	rbm42	99	68.409	ENSTNIG00000011669	rbm42	100	68.707	Tetraodon_nigroviridis
ENSSPAG00000019871	rbm42	100	56.306	ENSXETG00000017599	rbm42	100	58.080	Xenopus_tropicalis
ENSSPAG00000019871	rbm42	100	79.369	ENSXMAG00000012827	rbm42	100	80.976	Xiphophorus_maculatus