EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000020327 (Gene tree)
Gene ID: 103354318
Gene Symbol: EDC3 (1 of many)
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 24533 bases
Position: chrKK580175.1:242676-267208
Accession: 103354318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000026949	FDF	PF09532.10	4.9e-07	1	1
ENSSPAP00000026949	LSM14	PF12701.7	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000027390	EDC3 (1 of many)-201	4456	XM_008277643	ENSSPAP00000026949	474 (aa)	XP_008275865	UPI0004969E62

Gene Model

Click here to download ENSSPAG00000020327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000020327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000020327	EDC3	100	66.253	ENSSPAG00000010009	edc3	100	65.839

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000020327	EDC3	100	57.588	ENSG00000179151	EDC3	100	77.778	Homo_sapiens
ENSSPAG00000020327	EDC3	100	81.504	ENSAPOG00000008655	EDC3	100	81.504	Acanthochromis_polyacanthus
ENSSPAG00000020327	EDC3	100	66.667	ENSAPOG00000010791	edc3	100	66.253	Acanthochromis_polyacanthus
ENSSPAG00000020327	EDC3	100	57.588	ENSAMEG00000008963	EDC3	100	57.588	Ailuropoda_melanoleuca
ENSSPAG00000020327	EDC3	100	66.253	ENSACIG00000017751	edc3	100	65.424	Amphilophus_citrinellus
ENSSPAG00000020327	EDC3	99	78.586	ENSACIG00000005330	EDC3	99	78.586	Amphilophus_citrinellus
ENSSPAG00000020327	EDC3	100	89.873	ENSAOCG00000009103	-	100	89.873	Amphiprion_ocellaris
ENSSPAG00000020327	EDC3	100	66.804	ENSAOCG00000005431	edc3	100	66.598	Amphiprion_ocellaris
ENSSPAG00000020327	EDC3	100	66.804	ENSAPEG00000000968	edc3	100	66.598	Amphiprion_percula
ENSSPAG00000020327	EDC3	100	90.084	ENSAPEG00000007841	EDC3	100	90.084	Amphiprion_percula
ENSSPAG00000020327	EDC3	100	67.081	ENSATEG00000015505	edc3	100	66.253	Anabas_testudineus
ENSSPAG00000020327	EDC3	100	82.353	ENSATEG00000004205	-	100	82.353	Anabas_testudineus
ENSSPAG00000020327	EDC3	85	60.934	ENSAPLG00000008957	EDC3	80	65.395	Anas_platyrhynchos
ENSSPAG00000020327	EDC3	77	52.618	ENSACAG00000000460	-	100	52.618	Anolis_carolinensis
ENSSPAG00000020327	EDC3	100	58.171	ENSANAG00000024078	EDC3	100	58.171	Aotus_nancymaae
ENSSPAG00000020327	EDC3	99	80.380	ENSACLG00000018776	-	99	80.380	Astatotilapia_calliptera
ENSSPAG00000020327	EDC3	100	65.839	ENSACLG00000007232	edc3	100	65.424	Astatotilapia_calliptera
ENSSPAG00000020327	EDC3	100	64.591	ENSAMXG00000001589	edc3	100	64.591	Astyanax_mexicanus
ENSSPAG00000020327	EDC3	100	58.171	ENSBTAG00000007308	EDC3	100	57.977	Bos_taurus
ENSSPAG00000020327	EDC3	100	57.977	ENSCJAG00000017681	EDC3	100	57.977	Callithrix_jacchus
ENSSPAG00000020327	EDC3	100	57.198	ENSCAFG00000017935	EDC3	100	57.004	Canis_familiaris
ENSSPAG00000020327	EDC3	100	57.198	ENSCAFG00020003909	EDC3	100	57.004	Canis_lupus_dingo
ENSSPAG00000020327	EDC3	100	58.171	ENSCHIG00000023658	EDC3	100	57.977	Capra_hircus
ENSSPAG00000020327	EDC3	100	57.588	ENSTSYG00000004822	EDC3	100	57.588	Carlito_syrichta
ENSSPAG00000020327	EDC3	100	58.171	ENSCPOG00000015595	EDC3	100	58.171	Cavia_porcellus
ENSSPAG00000020327	EDC3	100	57.782	ENSCCAG00000021663	EDC3	100	57.782	Cebus_capucinus
ENSSPAG00000020327	EDC3	100	57.670	ENSCATG00000037511	EDC3	100	57.393	Cercocebus_atys
ENSSPAG00000020327	EDC3	100	58.560	ENSCLAG00000005700	EDC3	100	58.560	Chinchilla_lanigera
ENSSPAG00000020327	EDC3	100	57.670	ENSCSAG00000014239	EDC3	100	57.393	Chlorocebus_sabaeus
ENSSPAG00000020327	EDC3	99	58.203	ENSCPBG00000024239	EDC3	99	58.203	Chrysemys_picta_bellii
ENSSPAG00000020327	EDC3	99	35.913	ENSCING00000022142	-	99	35.913	Ciona_intestinalis
ENSSPAG00000020327	EDC3	100	57.670	ENSCANG00000028699	EDC3	100	57.393	Colobus_angolensis_palliatus
ENSSPAG00000020327	EDC3	100	57.588	ENSCGRG00001013874	Edc3	100	57.588	Cricetulus_griseus_chok1gshd
ENSSPAG00000020327	EDC3	100	57.588	ENSCGRG00000011885	Edc3	100	57.588	Cricetulus_griseus_crigri
ENSSPAG00000020327	EDC3	99	66.528	ENSCSEG00000012996	edc3	99	66.320	Cynoglossus_semilaevis
ENSSPAG00000020327	EDC3	100	66.598	ENSCVAG00000008023	edc3	100	66.183	Cyprinodon_variegatus
ENSSPAG00000020327	EDC3	99	61.176	ENSDARG00000051931	edc3	99	61.176	Danio_rerio
ENSSPAG00000020327	EDC3	100	51.901	ENSDNOG00000030661	EDC3	100	51.521	Dasypus_novemcinctus
ENSSPAG00000020327	EDC3	70	77.778	ENSETEG00000002398	-	64	77.778	Echinops_telfairi
ENSSPAG00000020327	EDC3	100	58.171	ENSEASG00005005071	EDC3	100	58.171	Equus_asinus_asinus
ENSSPAG00000020327	EDC3	100	58.171	ENSECAG00000017994	EDC3	100	58.171	Equus_caballus
ENSSPAG00000020327	EDC3	100	64.536	ENSELUG00000005794	edc3	100	64.536	Esox_lucius
ENSSPAG00000020327	EDC3	100	69.247	ENSELUG00000007607	EDC3	100	69.247	Esox_lucius
ENSSPAG00000020327	EDC3	100	57.782	ENSFCAG00000002014	EDC3	100	57.782	Felis_catus
ENSSPAG00000020327	EDC3	98	56.548	ENSFALG00000004543	EDC3	96	55.952	Ficedula_albicollis
ENSSPAG00000020327	EDC3	100	58.366	ENSFDAG00000012582	EDC3	100	57.782	Fukomys_damarensis
ENSSPAG00000020327	EDC3	100	66.253	ENSFHEG00000009375	edc3	100	65.839	Fundulus_heteroclitus
ENSSPAG00000020327	EDC3	100	67.909	ENSGMOG00000002715	edc3	100	67.909	Gadus_morhua
ENSSPAG00000020327	EDC3	99	58.431	ENSGALG00000040181	EDC3	99	57.843	Gallus_gallus
ENSSPAG00000020327	EDC3	100	65.010	ENSGAFG00000014433	edc3	100	64.803	Gambusia_affinis
ENSSPAG00000020327	EDC3	100	65.839	ENSGACG00000009783	edc3	100	65.631	Gasterosteus_aculeatus
ENSSPAG00000020327	EDC3	99	67.976	ENSGACG00000014671	EDC3	99	67.583	Gasterosteus_aculeatus
ENSSPAG00000020327	EDC3	99	58.235	ENSGAGG00000023477	EDC3	99	58.235	Gopherus_agassizii
ENSSPAG00000020327	EDC3	100	57.588	ENSGGOG00000003552	EDC3	100	57.588	Gorilla_gorilla
ENSSPAG00000020327	EDC3	100	65.839	ENSHBUG00000003635	edc3	100	65.424	Haplochromis_burtoni
ENSSPAG00000020327	EDC3	99	80.591	ENSHBUG00000020817	EDC3	99	80.591	Haplochromis_burtoni
ENSSPAG00000020327	EDC3	100	65.208	ENSHCOG00000016834	edc3	100	64.792	Hippocampus_comes
ENSSPAG00000020327	EDC3	99	64.271	ENSIPUG00000005695	edc3	99	63.673	Ictalurus_punctatus
ENSSPAG00000020327	EDC3	100	58.171	ENSSTOG00000013936	EDC3	100	58.171	Ictidomys_tridecemlineatus
ENSSPAG00000020327	EDC3	100	58.171	ENSJJAG00000008074	Edc3	100	58.171	Jaculus_jaculus
ENSSPAG00000020327	EDC3	100	66.116	ENSKMAG00000001243	edc3	100	65.702	Kryptolebias_marmoratus
ENSSPAG00000020327	EDC3	100	79.622	ENSKMAG00000001987	EDC3	100	79.622	Kryptolebias_marmoratus
ENSSPAG00000020327	EDC3	100	80.126	ENSLBEG00000017984	EDC3	100	80.126	Labrus_bergylta
ENSSPAG00000020327	EDC3	100	65.424	ENSLBEG00000013435	edc3	99	65.010	Labrus_bergylta
ENSSPAG00000020327	EDC3	99	59.768	ENSLACG00000014149	EDC3	99	60.577	Latimeria_chalumnae
ENSSPAG00000020327	EDC3	99	59.800	ENSLOCG00000014625	edc3	99	60.362	Lepisosteus_oculatus
ENSSPAG00000020327	EDC3	100	57.895	ENSLAFG00000002992	EDC3	100	57.895	Loxodonta_africana
ENSSPAG00000020327	EDC3	100	57.476	ENSMFAG00000043074	EDC3	100	57.198	Macaca_fascicularis
ENSSPAG00000020327	EDC3	100	57.476	ENSMMUG00000011071	EDC3	100	57.198	Macaca_mulatta
ENSSPAG00000020327	EDC3	100	57.476	ENSMNEG00000035316	EDC3	100	57.198	Macaca_nemestrina
ENSSPAG00000020327	EDC3	100	57.670	ENSMLEG00000030372	EDC3	100	57.393	Mandrillus_leucophaeus
ENSSPAG00000020327	EDC3	100	66.186	ENSMAMG00000000505	edc3	100	66.186	Mastacembelus_armatus
ENSSPAG00000020327	EDC3	99	84.177	ENSMAMG00000005423	-	99	84.177	Mastacembelus_armatus
ENSSPAG00000020327	EDC3	99	79.707	ENSMZEG00005005654	EDC3	99	79.707	Maylandia_zebra
ENSSPAG00000020327	EDC3	100	65.631	ENSMZEG00005004892	edc3	100	65.217	Maylandia_zebra
ENSSPAG00000020327	EDC3	99	58.627	ENSMGAG00000002617	EDC3	99	58.039	Meleagris_gallopavo
ENSSPAG00000020327	EDC3	100	57.782	ENSMICG00000043190	EDC3	100	57.782	Microcebus_murinus
ENSSPAG00000020327	EDC3	100	57.087	ENSMOCG00000016205	Edc3	100	56.809	Microtus_ochrogaster
ENSSPAG00000020327	EDC3	99	66.320	ENSMMOG00000012278	edc3	99	66.528	Mola_mola
ENSSPAG00000020327	EDC3	99	57.422	ENSMODG00000009442	EDC3	99	57.422	Monodelphis_domestica
ENSSPAG00000020327	EDC3	100	67.081	ENSMALG00000008658	edc3	100	66.667	Monopterus_albus
ENSSPAG00000020327	EDC3	100	58.171	MGP_CAROLIEiJ_G0032280	Edc3	100	73.846	Mus_caroli
ENSSPAG00000020327	EDC3	100	57.393	ENSMUSG00000038957	Edc3	100	73.846	Mus_musculus
ENSSPAG00000020327	EDC3	100	57.393	MGP_PahariEiJ_G0015146	Edc3	100	73.846	Mus_pahari
ENSSPAG00000020327	EDC3	100	57.588	MGP_SPRETEiJ_G0033420	Edc3	100	73.846	Mus_spretus
ENSSPAG00000020327	EDC3	100	57.588	ENSMPUG00000017293	EDC3	100	57.588	Mustela_putorius_furo
ENSSPAG00000020327	EDC3	100	57.946	ENSMLUG00000016382	EDC3	100	57.946	Myotis_lucifugus
ENSSPAG00000020327	EDC3	100	57.588	ENSNGAG00000010923	Edc3	100	57.588	Nannospalax_galili
ENSSPAG00000020327	EDC3	99	79.167	ENSNBRG00000007881	EDC3	99	79.167	Neolamprologus_brichardi
ENSSPAG00000020327	EDC3	100	65.424	ENSNBRG00000002434	edc3	100	65.010	Neolamprologus_brichardi
ENSSPAG00000020327	EDC3	100	50.000	ENSNLEG00000014577	EDC3	100	50.000	Nomascus_leucogenys
ENSSPAG00000020327	EDC3	99	57.730	ENSMEUG00000009077	EDC3	99	57.451	Notamacropus_eugenii
ENSSPAG00000020327	EDC3	86	77.778	ENSOPRG00000009540	-	79	77.778	Ochotona_princeps
ENSSPAG00000020327	EDC3	99	74.659	ENSONIG00000002932	-	99	74.659	Oreochromis_niloticus
ENSSPAG00000020327	EDC3	100	66.253	ENSONIG00000008434	edc3	100	65.839	Oreochromis_niloticus
ENSSPAG00000020327	EDC3	77	55.473	ENSOCUG00000017740	EDC3	86	54.478	Oryctolagus_cuniculus
ENSSPAG00000020327	EDC3	100	64.463	ENSORLG00000004883	edc3	100	64.050	Oryzias_latipes
ENSSPAG00000020327	EDC3	100	79.325	ENSORLG00000014399	-	98	79.325	Oryzias_latipes
ENSSPAG00000020327	EDC3	100	79.325	ENSORLG00020019446	-	100	79.325	Oryzias_latipes_hni
ENSSPAG00000020327	EDC3	100	64.876	ENSORLG00020012262	edc3	100	64.463	Oryzias_latipes_hni
ENSSPAG00000020327	EDC3	100	64.876	ENSORLG00015005634	edc3	100	64.463	Oryzias_latipes_hsok
ENSSPAG00000020327	EDC3	100	78.903	ENSORLG00015017635	-	96	78.903	Oryzias_latipes_hsok
ENSSPAG00000020327	EDC3	100	78.903	ENSOMEG00000017354	EDC3	100	78.903	Oryzias_melastigma
ENSSPAG00000020327	EDC3	100	65.424	ENSOMEG00000014026	edc3	100	65.217	Oryzias_melastigma
ENSSPAG00000020327	EDC3	100	57.393	ENSOGAG00000014441	EDC3	100	57.782	Otolemur_garnettii
ENSSPAG00000020327	EDC3	100	57.476	ENSOARG00000003476	EDC3	100	57.864	Ovis_aries
ENSSPAG00000020327	EDC3	100	57.588	ENSPPAG00000040143	EDC3	100	57.588	Pan_paniscus
ENSSPAG00000020327	EDC3	100	57.588	ENSPPRG00000006257	EDC3	100	57.588	Panthera_pardus
ENSSPAG00000020327	EDC3	100	57.588	ENSPTIG00000017424	EDC3	100	57.588	Panthera_tigris_altaica
ENSSPAG00000020327	EDC3	100	57.588	ENSPTRG00000007279	EDC3	100	57.588	Pan_troglodytes
ENSSPAG00000020327	EDC3	100	57.670	ENSPANG00000015997	EDC3	100	57.393	Papio_anubis
ENSSPAG00000020327	EDC3	100	64.185	ENSPKIG00000019810	EDC3	100	63.911	Paramormyrops_kingsleyae
ENSSPAG00000020327	EDC3	99	62.846	ENSPKIG00000004416	edc3	99	62.157	Paramormyrops_kingsleyae
ENSSPAG00000020327	EDC3	99	54.102	ENSPSIG00000008474	EDC3	99	55.078	Pelodiscus_sinensis
ENSSPAG00000020327	EDC3	100	65.281	ENSPMGG00000007223	edc3	100	64.657	Periophthalmus_magnuspinnatus
ENSSPAG00000020327	EDC3	100	57.782	ENSPEMG00000015260	Edc3	100	57.782	Peromyscus_maniculatus_bairdii
ENSSPAG00000020327	EDC3	99	57.255	ENSPCIG00000006276	EDC3	70	57.255	Phascolarctos_cinereus
ENSSPAG00000020327	EDC3	100	66.460	ENSPFOG00000012204	edc3	100	66.046	Poecilia_formosa
ENSSPAG00000020327	EDC3	100	66.460	ENSPLAG00000014420	edc3	100	66.046	Poecilia_latipinna
ENSSPAG00000020327	EDC3	100	66.460	ENSPMEG00000023289	edc3	100	66.046	Poecilia_mexicana
ENSSPAG00000020327	EDC3	100	65.839	ENSPREG00000016022	edc3	100	65.424	Poecilia_reticulata
ENSSPAG00000020327	EDC3	100	56.615	ENSPPYG00000006642	EDC3	100	56.615	Pongo_abelii
ENSSPAG00000020327	EDC3	87	77.778	ENSPCAG00000002802	EDC3	80	77.778	Procavia_capensis
ENSSPAG00000020327	EDC3	100	57.588	ENSPCOG00000013364	EDC3	100	57.588	Propithecus_coquereli
ENSSPAG00000020327	EDC3	100	58.366	ENSPVAG00000014733	EDC3	100	57.782	Pteropus_vampyrus
ENSSPAG00000020327	EDC3	100	65.839	ENSPNYG00000021797	edc3	100	65.424	Pundamilia_nyererei
ENSSPAG00000020327	EDC3	99	80.591	ENSPNYG00000009669	EDC3	99	80.591	Pundamilia_nyererei
ENSSPAG00000020327	EDC3	100	62.913	ENSPNAG00000019657	edc3	100	62.913	Pygocentrus_nattereri
ENSSPAG00000020327	EDC3	99	57.255	ENSRNOG00000019579	Edc3	99	57.451	Rattus_norvegicus
ENSSPAG00000020327	EDC3	100	58.171	ENSRBIG00000019488	EDC3	100	57.588	Rhinopithecus_bieti
ENSSPAG00000020327	EDC3	100	58.171	ENSRROG00000034959	EDC3	100	57.588	Rhinopithecus_roxellana
ENSSPAG00000020327	EDC3	100	57.782	ENSSBOG00000004896	EDC3	100	57.782	Saimiri_boliviensis_boliviensis
ENSSPAG00000020327	EDC3	96	55.781	ENSSHAG00000015075	EDC3	95	55.781	Sarcophilus_harrisii
ENSSPAG00000020327	EDC3	100	67.300	ENSSFOG00015002439	edc3	100	67.089	Scleropages_formosus
ENSSPAG00000020327	EDC3	100	65.408	ENSSFOG00015016939	edc3	100	65.278	Scleropages_formosus
ENSSPAG00000020327	EDC3	100	65.839	ENSSMAG00000010695	edc3	100	65.424	Scophthalmus_maximus
ENSSPAG00000020327	EDC3	99	81.857	ENSSMAG00000010176	-	99	81.857	Scophthalmus_maximus
ENSSPAG00000020327	EDC3	100	66.460	ENSSDUG00000021844	edc3	100	66.046	Seriola_dumerili
ENSSPAG00000020327	EDC3	100	84.874	ENSSDUG00000007671	EDC3	100	84.874	Seriola_dumerili
ENSSPAG00000020327	EDC3	100	66.460	ENSSLDG00000022046	edc3	100	66.046	Seriola_lalandi_dorsalis
ENSSPAG00000020327	EDC3	79	72.984	ENSSARG00000003907	EDC3	74	72.984	Sorex_araneus
ENSSPAG00000020327	EDC3	99	58.398	ENSSPUG00000008232	EDC3	99	57.617	Sphenodon_punctatus
ENSSPAG00000020327	EDC3	100	61.603	ENSSSCG00000001903	EDC3	100	61.603	Sus_scrofa
ENSSPAG00000020327	EDC3	99	58.431	ENSTGUG00000004007	EDC3	99	57.843	Taeniopygia_guttata
ENSSPAG00000020327	EDC3	100	67.015	ENSTRUG00000017078	edc3	100	66.183	Takifugu_rubripes
ENSSPAG00000020327	EDC3	100	66.186	ENSTNIG00000016047	edc3	100	65.361	Tetraodon_nigroviridis
ENSSPAG00000020327	EDC3	100	57.422	ENSTTRG00000007990	EDC3	100	57.422	Tursiops_truncatus
ENSSPAG00000020327	EDC3	100	57.588	ENSUAMG00000026710	-	100	57.588	Ursus_americanus
ENSSPAG00000020327	EDC3	100	57.588	ENSUMAG00000005006	EDC3	96	57.588	Ursus_maritimus
ENSSPAG00000020327	EDC3	86	70.370	ENSVPAG00000003499	-	79	70.370	Vicugna_pacos
ENSSPAG00000020327	EDC3	100	57.198	ENSVVUG00000018601	EDC3	100	57.198	Vulpes_vulpes
ENSSPAG00000020327	EDC3	74	64.957	ENSXETG00000010622	edc3	99	64.957	Xenopus_tropicalis
ENSSPAG00000020327	EDC3	100	65.289	ENSXMAG00000007377	edc3	100	65.010	Xiphophorus_maculatus