EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000020989 (Gene tree)
Gene ID: 103365886
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 8193 bases
Position: chrKK580959.1:74257-82449
Accession: 103365886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000027846	RRM_1	PF00076.22	2.5e-16	1	1
ENSSPAP00000027833	RRM_1	PF00076.22	3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000028287	RBM38-201	988	XM_008293446	ENSSPAP00000027833	244 (aa)	XP_008291668	UPI000496891B
ENSSPAT00000028300	RBM38-202	666	-	ENSSPAP00000027846	221 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000020989's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000020989's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000020989	RBM38	100	65.613	ENSSPAG00000011113	rbm38	98	65.613
ENSSPAG00000020989	RBM38	95	59.746	ENSSPAG00000014990	rbm24a	100	60.086
ENSSPAG00000020989	RBM38	57	33.636	ENSSPAG00000021014	hnrnpd	51	36.364
ENSSPAG00000020989	RBM38	67	74.026	ENSSPAG00000007941	rbm24b	100	59.514

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000020989	RBM38	91	69.767	ENSG00000132819	RBM38	94	85.593	Homo_sapiens
ENSSPAG00000020989	RBM38	100	65.476	ENSAPOG00000003301	rbm38	98	65.476	Acanthochromis_polyacanthus
ENSSPAG00000020989	RBM38	100	98.770	ENSAPOG00000009939	-	100	98.770	Acanthochromis_polyacanthus
ENSSPAG00000020989	RBM38	100	64.683	ENSACIG00000000010	rbm38	98	64.683	Amphilophus_citrinellus
ENSSPAG00000020989	RBM38	100	93.443	ENSACIG00000012502	-	100	96.610	Amphilophus_citrinellus
ENSSPAG00000020989	RBM38	100	65.873	ENSAOCG00000013497	-	98	65.873	Amphiprion_ocellaris
ENSSPAG00000020989	RBM38	97	98.734	ENSAOCG00000012559	RBM38	100	98.734	Amphiprion_ocellaris
ENSSPAG00000020989	RBM38	95	71.233	ENSAPEG00000013137	rbm38	98	65.873	Amphiprion_percula
ENSSPAG00000020989	RBM38	100	98.361	ENSAPEG00000023581	-	100	98.361	Amphiprion_percula
ENSSPAG00000020989	RBM38	100	97.131	ENSATEG00000016710	-	100	97.131	Anabas_testudineus
ENSSPAG00000020989	RBM38	100	64.032	ENSATEG00000016366	rbm38	98	64.032	Anabas_testudineus
ENSSPAG00000020989	RBM38	94	68.778	ENSACAG00000016238	RBM38	90	65.909	Anolis_carolinensis
ENSSPAG00000020989	RBM38	91	70.698	ENSANAG00000031959	RBM38	78	93.617	Aotus_nancymaae
ENSSPAG00000020989	RBM38	100	91.803	ENSACLG00000019514	-	100	91.803	Astatotilapia_calliptera
ENSSPAG00000020989	RBM38	100	64.957	ENSAMXG00000038120	rbm38	97	63.675	Astyanax_mexicanus
ENSSPAG00000020989	RBM38	100	79.098	ENSAMXG00000015601	-	100	76.639	Astyanax_mexicanus
ENSSPAG00000020989	RBM38	91	68.224	ENSBTAG00000008105	RBM38	89	67.606	Bos_taurus
ENSSPAG00000020989	RBM38	57	63.235	WBGene00006321	sup-12	63	78.947	Caenorhabditis_elegans
ENSSPAG00000020989	RBM38	91	70.698	ENSCJAG00000019139	RBM38	78	93.617	Callithrix_jacchus
ENSSPAG00000020989	RBM38	91	70.561	ENSCAFG00020021943	RBM38	89	69.626	Canis_lupus_dingo
ENSSPAG00000020989	RBM38	91	66.822	ENSCHIG00000002609	RBM38	89	66.197	Capra_hircus
ENSSPAG00000020989	RBM38	91	69.302	ENSCPOG00000012781	RBM38	89	68.075	Cavia_porcellus
ENSSPAG00000020989	RBM38	91	70.698	ENSCCAG00000036872	RBM38	78	93.617	Cebus_capucinus
ENSSPAG00000020989	RBM38	91	69.014	ENSCATG00000032133	RBM38	78	93.617	Cercocebus_atys
ENSSPAG00000020989	RBM38	91	69.302	ENSCLAG00000005906	RBM38	92	67.136	Chinchilla_lanigera
ENSSPAG00000020989	RBM38	91	69.014	ENSCSAG00000015503	RBM38	89	68.246	Chlorocebus_sabaeus
ENSSPAG00000020989	RBM38	92	71.628	ENSCPBG00000024059	RBM38	99	68.224	Chrysemys_picta_bellii
ENSSPAG00000020989	RBM38	95	51.818	ENSCANG00000030105	-	81	49.315	Colobus_angolensis_palliatus
ENSSPAG00000020989	RBM38	91	66.977	ENSCGRG00001012928	Rbm38	89	66.197	Cricetulus_griseus_chok1gshd
ENSSPAG00000020989	RBM38	100	92.623	ENSCSEG00000004701	-	100	92.623	Cynoglossus_semilaevis
ENSSPAG00000020989	RBM38	85	62.827	ENSCSEG00000020943	rbm38	60	67.403	Cynoglossus_semilaevis
ENSSPAG00000020989	RBM38	100	89.344	ENSCVAG00000005472	-	100	89.344	Cyprinodon_variegatus
ENSSPAG00000020989	RBM38	99	61.847	ENSCVAG00000015952	rbm38	98	62.302	Cyprinodon_variegatus
ENSSPAG00000020989	RBM38	96	77.830	ENSDARG00000058818	rbm38	82	81.538	Danio_rerio
ENSSPAG00000020989	RBM38	91	71.498	ENSDNOG00000032004	RBM38	98	70.874	Dasypus_novemcinctus
ENSSPAG00000020989	RBM38	91	69.159	ENSECAG00000007700	RBM38	89	67.136	Equus_caballus
ENSSPAG00000020989	RBM38	91	68.056	ENSEEUG00000013489	RBM38	89	65.888	Erinaceus_europaeus
ENSSPAG00000020989	RBM38	100	82.329	ENSELUG00000005849	-	100	81.928	Esox_lucius
ENSSPAG00000020989	RBM38	90	72.500	ENSELUG00000000585	-	98	64.889	Esox_lucius
ENSSPAG00000020989	RBM38	91	68.692	ENSFCAG00000042916	RBM38	84	86.538	Felis_catus
ENSSPAG00000020989	RBM38	81	75.138	ENSFALG00000010805	RBM38	92	72.067	Ficedula_albicollis
ENSSPAG00000020989	RBM38	100	88.393	ENSFHEG00000006160	-	100	86.607	Fundulus_heteroclitus
ENSSPAG00000020989	RBM38	100	61.905	ENSFHEG00000017748	rbm38	98	61.905	Fundulus_heteroclitus
ENSSPAG00000020989	RBM38	83	87.568	ENSGMOG00000016655	-	99	85.405	Gadus_morhua
ENSSPAG00000020989	RBM38	92	70.233	ENSGALG00000026081	RBM38	99	67.757	Gallus_gallus
ENSSPAG00000020989	RBM38	94	72.381	ENSGACG00000015224	rbm38	100	70.813	Gasterosteus_aculeatus
ENSSPAG00000020989	RBM38	94	85.652	ENSGACG00000009873	-	100	85.652	Gasterosteus_aculeatus
ENSSPAG00000020989	RBM38	92	71.163	ENSGAGG00000001187	RBM38	99	68.224	Gopherus_agassizii
ENSSPAG00000020989	RBM38	100	64.706	ENSHBUG00000012058	rbm38	98	64.683	Haplochromis_burtoni
ENSSPAG00000020989	RBM38	100	91.803	ENSHBUG00000011778	-	100	91.803	Haplochromis_burtoni
ENSSPAG00000020989	RBM38	91	65.421	ENSHGLG00000015077	RBM38	89	66.197	Heterocephalus_glaber_female
ENSSPAG00000020989	RBM38	100	50.211	ENSHCOG00000019040	rbm38	78	55.102	Hippocampus_comes
ENSSPAG00000020989	RBM38	94	90.821	ENSHCOG00000005622	-	57	91.414	Hippocampus_comes
ENSSPAG00000020989	RBM38	100	72.874	ENSIPUG00000019349	-	100	72.065	Ictalurus_punctatus
ENSSPAG00000020989	RBM38	92	60.944	ENSKMAG00000012402	rbm38	98	60.944	Kryptolebias_marmoratus
ENSSPAG00000020989	RBM38	100	92.742	ENSLBEG00000016163	RBM38	100	92.742	Labrus_bergylta
ENSSPAG00000020989	RBM38	100	65.873	ENSLBEG00000018878	rbm38	98	64.683	Labrus_bergylta
ENSSPAG00000020989	RBM38	100	75.214	ENSLOCG00000003456	rbm38	100	74.590	Lepisosteus_oculatus
ENSSPAG00000020989	RBM38	91	69.014	ENSMFAG00000043808	RBM38	82	89.109	Macaca_fascicularis
ENSSPAG00000020989	RBM38	91	69.014	ENSMMUG00000031391	RBM38	78	93.617	Macaca_mulatta
ENSSPAG00000020989	RBM38	91	69.014	ENSMNEG00000034683	RBM38	78	93.617	Macaca_nemestrina
ENSSPAG00000020989	RBM38	50	72.727	ENSMLEG00000043261	-	89	72.727	Mandrillus_leucophaeus
ENSSPAG00000020989	RBM38	100	67.059	ENSMAMG00000024135	rbm38	98	65.079	Mastacembelus_armatus
ENSSPAG00000020989	RBM38	100	94.672	ENSMAMG00000020499	RBM38	100	94.672	Mastacembelus_armatus
ENSSPAG00000020989	RBM38	100	64.706	ENSMZEG00005026036	rbm38	98	64.683	Maylandia_zebra
ENSSPAG00000020989	RBM38	100	91.803	ENSMZEG00005000849	-	100	91.803	Maylandia_zebra
ENSSPAG00000020989	RBM38	91	68.372	ENSMAUG00000021211	Rbm38	89	67.136	Mesocricetus_auratus
ENSSPAG00000020989	RBM38	91	70.233	ENSMICG00000038011	RBM38	98	68.075	Microcebus_murinus
ENSSPAG00000020989	RBM38	91	67.907	ENSMOCG00000008715	Rbm38	94	64.444	Microtus_ochrogaster
ENSSPAG00000020989	RBM38	100	94.672	ENSMMOG00000020051	-	100	94.672	Mola_mola
ENSSPAG00000020989	RBM38	92	67.907	ENSMODG00000016458	RBM38	91	67.757	Monodelphis_domestica
ENSSPAG00000020989	RBM38	76	72.353	ENSMALG00000022327	rbm38	71	72.289	Monopterus_albus
ENSSPAG00000020989	RBM38	86	96.296	ENSMALG00000004680	RBM38	72	96.296	Monopterus_albus
ENSSPAG00000020989	RBM38	91	65.888	MGP_CAROLIEiJ_G0024745	Rbm38	94	64.889	Mus_caroli
ENSSPAG00000020989	RBM38	91	65.888	ENSMUSG00000027510	Rbm38	94	64.889	Mus_musculus
ENSSPAG00000020989	RBM38	91	65.888	MGP_PahariEiJ_G0026186	Rbm38	94	64.889	Mus_pahari
ENSSPAG00000020989	RBM38	91	65.888	MGP_SPRETEiJ_G0025665	Rbm38	94	64.889	Mus_spretus
ENSSPAG00000020989	RBM38	80	74.176	ENSMPUG00000006518	RBM38	89	73.626	Mustela_putorius_furo
ENSSPAG00000020989	RBM38	91	67.757	ENSMLUG00000011140	RBM38	98	66.197	Myotis_lucifugus
ENSSPAG00000020989	RBM38	100	92.213	ENSNBRG00000022545	-	100	92.213	Neolamprologus_brichardi
ENSSPAG00000020989	RBM38	100	65.098	ENSNBRG00000022685	rbm38	98	65.079	Neolamprologus_brichardi
ENSSPAG00000020989	RBM38	51	80.357	ENSMEUG00000005475	-	84	80.357	Notamacropus_eugenii
ENSSPAG00000020989	RBM38	91	70.233	ENSODEG00000007980	RBM38	89	68.545	Octodon_degus
ENSSPAG00000020989	RBM38	99	92.181	ENSONIG00000020324	-	100	92.181	Oreochromis_niloticus
ENSSPAG00000020989	RBM38	99	64.961	ENSONIG00000017073	rbm38	100	64.940	Oreochromis_niloticus
ENSSPAG00000020989	RBM38	91	69.194	ENSOANG00000009259	RBM38	81	67.464	Ornithorhynchus_anatinus
ENSSPAG00000020989	RBM38	100	58.333	ENSORLG00000012154	rbm38	98	58.333	Oryzias_latipes
ENSSPAG00000020989	RBM38	100	88.211	ENSORLG00000027180	-	100	89.431	Oryzias_latipes
ENSSPAG00000020989	RBM38	100	88.211	ENSORLG00020020751	-	100	89.431	Oryzias_latipes_hni
ENSSPAG00000020989	RBM38	100	59.216	ENSORLG00020017871	rbm38	98	59.127	Oryzias_latipes_hni
ENSSPAG00000020989	RBM38	100	89.796	ENSORLG00015017040	-	100	89.796	Oryzias_latipes_hsok
ENSSPAG00000020989	RBM38	100	60.079	ENSORLG00015012606	rbm38	98	59.127	Oryzias_latipes_hsok
ENSSPAG00000020989	RBM38	100	92.213	ENSOMEG00000023912	-	100	92.213	Oryzias_melastigma
ENSSPAG00000020989	RBM38	99	60.870	ENSOMEG00000006805	rbm38	98	60.317	Oryzias_melastigma
ENSSPAG00000020989	RBM38	91	70.233	ENSOGAG00000029136	RBM38	88	68.545	Otolemur_garnettii
ENSSPAG00000020989	RBM38	91	68.692	ENSPPRG00000009507	RBM38	84	86.538	Panthera_pardus
ENSSPAG00000020989	RBM38	57	83.333	ENSPTRG00000045845	-	68	83.333	Pan_troglodytes
ENSSPAG00000020989	RBM38	80	74.176	ENSPTRG00000013661	RBM38	82	89.109	Pan_troglodytes
ENSSPAG00000020989	RBM38	91	69.014	ENSPANG00000020919	-	78	93.617	Papio_anubis
ENSSPAG00000020989	RBM38	92	56.164	ENSPANG00000033127	-	91	54.028	Papio_anubis
ENSSPAG00000020989	RBM38	100	74.459	ENSPKIG00000018122	-	95	90.090	Paramormyrops_kingsleyae
ENSSPAG00000020989	RBM38	100	70.281	ENSPKIG00000025417	rbm38	100	70.281	Paramormyrops_kingsleyae
ENSSPAG00000020989	RBM38	96	69.196	ENSPSIG00000011649	RBM38	94	66.368	Pelodiscus_sinensis
ENSSPAG00000020989	RBM38	100	84.274	ENSPMGG00000017094	-	100	84.274	Periophthalmus_magnuspinnatus
ENSSPAG00000020989	RBM38	99	63.347	ENSPMGG00000011343	rbm38	98	61.600	Periophthalmus_magnuspinnatus
ENSSPAG00000020989	RBM38	92	69.302	ENSPCIG00000013648	RBM38	91	65.888	Phascolarctos_cinereus
ENSSPAG00000020989	RBM38	100	59.843	ENSPFOG00000011658	rbm38	98	60.784	Poecilia_formosa
ENSSPAG00000020989	RBM38	100	60.392	ENSPLAG00000005218	rbm38	98	60.784	Poecilia_latipinna
ENSSPAG00000020989	RBM38	100	87.805	ENSPLAG00000002500	-	100	85.366	Poecilia_latipinna
ENSSPAG00000020989	RBM38	100	59.449	ENSPMEG00000015770	rbm38	98	60.784	Poecilia_mexicana
ENSSPAG00000020989	RBM38	100	59.843	ENSPREG00000007398	rbm38	98	60.784	Poecilia_reticulata
ENSSPAG00000020989	RBM38	91	69.302	ENSPCOG00000026201	RBM38	81	89.109	Propithecus_coquereli
ENSSPAG00000020989	RBM38	67	85.484	ENSPVAG00000006457	RBM38	66	85.484	Pteropus_vampyrus
ENSSPAG00000020989	RBM38	100	64.314	ENSPNYG00000021373	rbm38	98	64.286	Pundamilia_nyererei
ENSSPAG00000020989	RBM38	100	91.803	ENSPNYG00000019727	-	100	95.763	Pundamilia_nyererei
ENSSPAG00000020989	RBM38	92	77.073	ENSPNAG00000010596	rbm38	82	79.082	Pygocentrus_nattereri
ENSSPAG00000020989	RBM38	100	77.049	ENSPNAG00000015123	-	96	83.333	Pygocentrus_nattereri
ENSSPAG00000020989	RBM38	91	66.972	ENSRNOG00000006420	Rbm38	94	65.333	Rattus_norvegicus
ENSSPAG00000020989	RBM38	92	56.075	ENSRROG00000036388	-	88	54.286	Rhinopithecus_roxellana
ENSSPAG00000020989	RBM38	91	70.698	ENSSBOG00000031053	RBM38	93	89.109	Saimiri_boliviensis_boliviensis
ENSSPAG00000020989	RBM38	100	71.730	ENSSFOG00015004453	rbm38	100	72.874	Scleropages_formosus
ENSSPAG00000020989	RBM38	100	66.667	ENSSDUG00000022611	rbm38	98	66.667	Seriola_dumerili
ENSSPAG00000020989	RBM38	100	97.131	ENSSDUG00000021082	RBM38	100	97.131	Seriola_dumerili
ENSSPAG00000020989	RBM38	100	66.667	ENSSLDG00000010845	rbm38	98	66.667	Seriola_lalandi_dorsalis
ENSSPAG00000020989	RBM38	100	97.131	ENSSLDG00000011778	RBM38	100	97.131	Seriola_lalandi_dorsalis
ENSSPAG00000020989	RBM38	91	69.626	ENSSSCG00000007504	RBM38	89	69.014	Sus_scrofa
ENSSPAG00000020989	RBM38	98	65.041	ENSTRUG00000024954	rbm38	97	64.634	Takifugu_rubripes
ENSSPAG00000020989	RBM38	100	89.388	ENSTRUG00000019869	-	100	89.388	Takifugu_rubripes
ENSSPAG00000020989	RBM38	95	87.013	ENSTNIG00000007093	-	100	86.580	Tetraodon_nigroviridis
ENSSPAG00000020989	RBM38	91	69.302	ENSUAMG00000019780	RBM38	89	68.224	Ursus_americanus
ENSSPAG00000020989	RBM38	91	70.561	ENSVVUG00000017246	RBM38	89	69.626	Vulpes_vulpes
ENSSPAG00000020989	RBM38	92	64.840	ENSXETG00000011268	rbm38	97	61.927	Xenopus_tropicalis
ENSSPAG00000020989	RBM38	78	76.536	ENSXCOG00000017324	-	68	82.803	Xiphophorus_couchianus
ENSSPAG00000020989	RBM38	100	61.355	ENSXMAG00000023662	rbm38	98	62.302	Xiphophorus_maculatus