EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000021398 (Gene tree)
Gene ID: 103365350
Gene Symbol: snd1
Alias: SN4TDR|TDRD11|p100L|p100S|wu:fc27g10
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 73945 bases
Position: chrKK580902.1:184906-258850
Accession: 103365350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000028535	SNase	PF00565.17	1e-48	1	3
ENSSPAP00000028535	SNase	PF00565.17	1e-48	2	3
ENSSPAP00000028535	SNase	PF00565.17	1e-48	3	3
ENSSPAP00000028502	SNase	PF00565.17	2.8e-48	1	3
ENSSPAP00000028502	SNase	PF00565.17	2.8e-48	2	3
ENSSPAP00000028502	SNase	PF00565.17	2.8e-48	3	3
ENSSPAP00000028553	SNase	PF00565.17	4.8e-47	1	3
ENSSPAP00000028553	SNase	PF00565.17	4.8e-47	2	3
ENSSPAP00000028553	SNase	PF00565.17	4.8e-47	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000028998	-	1821	-	ENSSPAP00000028535	606 (aa)	-	-
ENSSPAT00000029016	-	1794	-	ENSSPAP00000028553	597 (aa)	-	-
ENSSPAT00000028964	-	2120	XM_008292771	ENSSPAP00000028502	641 (aa)	XP_008290993	-

Gene Model

Click here to download ENSSPAG00000021398's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000021398's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000021398	snd1	96	86.736	ENSG00000197157	SND1	76	84.602	Homo_sapiens
ENSSPAG00000021398	snd1	99	96.447	ENSAPOG00000017599	snd1	73	96.447	Acanthochromis_polyacanthus
ENSSPAG00000021398	snd1	99	84.654	ENSAMEG00000004664	SND1	70	84.654	Ailuropoda_melanoleuca
ENSSPAG00000021398	snd1	99	90.832	ENSACIG00000003551	snd1	72	90.832	Amphilophus_citrinellus
ENSSPAG00000021398	snd1	99	96.616	ENSAOCG00000014166	snd1	73	96.616	Amphiprion_ocellaris
ENSSPAG00000021398	snd1	99	96.447	ENSAPEG00000007067	snd1	73	96.447	Amphiprion_percula
ENSSPAG00000021398	snd1	99	96.108	ENSATEG00000018475	snd1	66	96.108	Anabas_testudineus
ENSSPAG00000021398	snd1	96	86.562	ENSANAG00000034463	SND1	74	86.549	Aotus_nancymaae
ENSSPAG00000021398	snd1	99	94.416	ENSACLG00000022897	snd1	73	94.416	Astatotilapia_calliptera
ENSSPAG00000021398	snd1	98	90.847	ENSAMXG00000016318	snd1	77	90.847	Astyanax_mexicanus
ENSSPAG00000021398	snd1	96	86.911	ENSBTAG00000010692	SND1	76	84.772	Bos_taurus
ENSSPAG00000021398	snd1	98	49.917	WBGene00006626	tsn-1	76	49.750	Caenorhabditis_elegans
ENSSPAG00000021398	snd1	96	86.736	ENSCJAG00000017668	SND1	74	86.726	Callithrix_jacchus
ENSSPAG00000021398	snd1	99	84.941	ENSCAFG00000001700	SND1	73	84.941	Canis_familiaris
ENSSPAG00000021398	snd1	99	84.941	ENSCAFG00020021639	SND1	73	84.941	Canis_lupus_dingo
ENSSPAG00000021398	snd1	96	86.736	ENSCHIG00000023390	SND1	71	86.726	Capra_hircus
ENSSPAG00000021398	snd1	95	86.726	ENSTSYG00000004979	SND1	97	86.726	Carlito_syrichta
ENSSPAG00000021398	snd1	94	76.325	ENSCAPG00000010677	SND1	78	76.325	Cavia_aperea
ENSSPAG00000021398	snd1	96	87.086	ENSCPOG00000006251	SND1	76	84.941	Cavia_porcellus
ENSSPAG00000021398	snd1	96	86.736	ENSCCAG00000036847	SND1	74	86.726	Cebus_capucinus
ENSSPAG00000021398	snd1	96	86.911	ENSCATG00000035214	SND1	75	86.903	Cercocebus_atys
ENSSPAG00000021398	snd1	96	86.736	ENSCLAG00000011796	SND1	98	84.772	Chinchilla_lanigera
ENSSPAG00000021398	snd1	96	86.911	ENSCSAG00000010182	SND1	76	84.772	Chlorocebus_sabaeus
ENSSPAG00000021398	snd1	94	64.198	ENSCHOG00000002218	SND1	73	64.198	Choloepus_hoffmanni
ENSSPAG00000021398	snd1	99	86.102	ENSCPBG00000018094	SND1	75	86.102	Chrysemys_picta_bellii
ENSSPAG00000021398	snd1	96	60.684	ENSCING00000000524	-	74	60.368	Ciona_intestinalis
ENSSPAG00000021398	snd1	98	61.565	ENSCSAVG00000008807	-	73	61.565	Ciona_savignyi
ENSSPAG00000021398	snd1	96	86.911	ENSCANG00000035119	SND1	76	84.772	Colobus_angolensis_palliatus
ENSSPAG00000021398	snd1	96	86.213	ENSCGRG00001022514	Snd1	98	84.264	Cricetulus_griseus_chok1gshd
ENSSPAG00000021398	snd1	94	86.195	ENSCGRG00000012277	Snd1	72	86.195	Cricetulus_griseus_crigri
ENSSPAG00000021398	snd1	99	94.924	ENSCSEG00000008661	snd1	75	94.924	Cynoglossus_semilaevis
ENSSPAG00000021398	snd1	99	94.585	ENSCVAG00000010316	snd1	73	94.585	Cyprinodon_variegatus
ENSSPAG00000021398	snd1	99	90.894	ENSDARG00000006766	snd1	98	90.265	Danio_rerio
ENSSPAG00000021398	snd1	95	83.803	ENSDNOG00000006795	SND1	75	83.803	Dasypus_novemcinctus
ENSSPAG00000021398	snd1	96	86.562	ENSDORG00000000336	Snd1	76	84.433	Dipodomys_ordii
ENSSPAG00000021398	snd1	97	52.588	FBgn0035121	Tudor-SN	72	52.117	Drosophila_melanogaster
ENSSPAG00000021398	snd1	94	61.593	ENSETEG00000000375	SND1	72	61.593	Echinops_telfairi
ENSSPAG00000021398	snd1	91	62.155	ENSEBUG00000014201	-	84	77.049	Eptatretus_burgeri
ENSSPAG00000021398	snd1	96	86.562	ENSEASG00005008513	SND1	73	82.208	Equus_asinus_asinus
ENSSPAG00000021398	snd1	96	86.562	ENSECAG00000011451	SND1	74	84.433	Equus_caballus
ENSSPAG00000021398	snd1	96	85.243	ENSEEUG00000014737	SND1	65	83.277	Erinaceus_europaeus
ENSSPAG00000021398	snd1	98	89.358	ENSELUG00000001805	snd1	70	89.358	Esox_lucius
ENSSPAG00000021398	snd1	99	85.110	ENSFCAG00000008289	SND1	78	85.110	Felis_catus
ENSSPAG00000021398	snd1	96	86.562	ENSFDAG00000015881	SND1	76	84.433	Fukomys_damarensis
ENSSPAG00000021398	snd1	99	94.247	ENSFHEG00000004093	snd1	75	94.247	Fundulus_heteroclitus
ENSSPAG00000021398	snd1	54	85.876	ENSGALG00000052684	-	55	78.261	Gallus_gallus
ENSSPAG00000021398	snd1	99	95.262	ENSGAFG00000008421	snd1	73	95.262	Gambusia_affinis
ENSSPAG00000021398	snd1	99	45.649	ENSGACG00000019793	snd1	72	45.705	Gasterosteus_aculeatus
ENSSPAG00000021398	snd1	96	86.911	ENSGGOG00000009614	SND1	74	86.903	Gorilla_gorilla
ENSSPAG00000021398	snd1	99	94.247	ENSHBUG00000019135	snd1	73	94.247	Haplochromis_burtoni
ENSSPAG00000021398	snd1	96	86.736	ENSHGLG00000003618	SND1	98	84.602	Heterocephalus_glaber_female
ENSSPAG00000021398	snd1	96	86.736	ENSHGLG00100012449	SND1	74	86.736	Heterocephalus_glaber_male
ENSSPAG00000021398	snd1	99	93.739	ENSHCOG00000005266	snd1	73	93.739	Hippocampus_comes
ENSSPAG00000021398	snd1	98	89.679	ENSIPUG00000013279	snd1	74	89.679	Ictalurus_punctatus
ENSSPAG00000021398	snd1	96	86.911	ENSSTOG00000002140	SND1	76	84.772	Ictidomys_tridecemlineatus
ENSSPAG00000021398	snd1	96	86.562	ENSJJAG00000009561	Snd1	73	84.433	Jaculus_jaculus
ENSSPAG00000021398	snd1	99	95.262	ENSKMAG00000016997	snd1	73	95.262	Kryptolebias_marmoratus
ENSSPAG00000021398	snd1	99	95.798	ENSLBEG00000013563	snd1	76	95.770	Labrus_bergylta
ENSSPAG00000021398	snd1	96	89.897	ENSLOCG00000015537	snd1	73	88.314	Lepisosteus_oculatus
ENSSPAG00000021398	snd1	97	85.495	ENSLAFG00000009696	SND1	73	84.772	Loxodonta_africana
ENSSPAG00000021398	snd1	96	86.911	ENSMFAG00000038114	SND1	75	86.903	Macaca_fascicularis
ENSSPAG00000021398	snd1	96	86.911	ENSMMUG00000015432	SND1	98	84.396	Macaca_mulatta
ENSSPAG00000021398	snd1	96	86.911	ENSMNEG00000039808	SND1	98	86.491	Macaca_nemestrina
ENSSPAG00000021398	snd1	96	86.911	ENSMLEG00000029040	SND1	98	86.491	Mandrillus_leucophaeus
ENSSPAG00000021398	snd1	99	93.739	ENSMAMG00000011739	snd1	73	93.739	Mastacembelus_armatus
ENSSPAG00000021398	snd1	99	94.416	ENSMZEG00005005681	snd1	74	94.416	Maylandia_zebra
ENSSPAG00000021398	snd1	96	86.911	ENSMICG00000000097	SND1	76	84.772	Microcebus_murinus
ENSSPAG00000021398	snd1	96	86.562	ENSMOCG00000005040	Snd1	76	84.433	Microtus_ochrogaster
ENSSPAG00000021398	snd1	99	95.431	ENSMMOG00000001795	snd1	73	95.431	Mola_mola
ENSSPAG00000021398	snd1	96	86.038	ENSMODG00000015182	SND1	73	83.926	Monodelphis_domestica
ENSSPAG00000021398	snd1	99	94.924	ENSMALG00000012071	snd1	74	94.924	Monopterus_albus
ENSSPAG00000021398	snd1	97	85.962	MGP_CAROLIEiJ_G0028159	Snd1	99	84.512	Mus_caroli
ENSSPAG00000021398	snd1	96	85.864	ENSMUSG00000001424	Snd1	98	84.095	Mus_musculus
ENSSPAG00000021398	snd1	96	86.285	MGP_PahariEiJ_G0021917	Snd1	100	84.512	Mus_pahari
ENSSPAG00000021398	snd1	96	86.213	MGP_SPRETEiJ_G0029159	Snd1	98	84.433	Mus_spretus
ENSSPAG00000021398	snd1	99	84.941	ENSMPUG00000006545	SND1	73	84.941	Mustela_putorius_furo
ENSSPAG00000021398	snd1	95	86.420	ENSMLUG00000017130	SND1	71	86.420	Myotis_lucifugus
ENSSPAG00000021398	snd1	96	86.387	ENSNGAG00000011186	Snd1	76	84.264	Nannospalax_galili
ENSSPAG00000021398	snd1	99	94.416	ENSNBRG00000006681	snd1	73	94.416	Neolamprologus_brichardi
ENSSPAG00000021398	snd1	96	86.979	ENSNLEG00000012263	SND1	96	86.979	Nomascus_leucogenys
ENSSPAG00000021398	snd1	96	76.614	ENSOPRG00000013405	SND1	67	74.457	Ochotona_princeps
ENSSPAG00000021398	snd1	96	86.911	ENSODEG00000011502	SND1	76	84.915	Octodon_degus
ENSSPAG00000021398	snd1	99	94.247	ENSONIG00000011481	snd1	71	94.247	Oreochromis_niloticus
ENSSPAG00000021398	snd1	95	86.116	ENSOANG00000000817	SND1	70	86.116	Ornithorhynchus_anatinus
ENSSPAG00000021398	snd1	98	84.095	ENSOCUG00000001620	SND1	76	84.095	Oryctolagus_cuniculus
ENSSPAG00000021398	snd1	99	95.093	ENSORLG00000015201	snd1	74	95.093	Oryzias_latipes
ENSSPAG00000021398	snd1	99	95.262	ENSORLG00020013991	snd1	74	95.262	Oryzias_latipes_hni
ENSSPAG00000021398	snd1	99	95.262	ENSORLG00015012436	snd1	73	95.262	Oryzias_latipes_hsok
ENSSPAG00000021398	snd1	99	94.247	ENSOMEG00000006406	snd1	73	94.247	Oryzias_melastigma
ENSSPAG00000021398	snd1	96	86.435	ENSOGAG00000013356	SND1	69	84.317	Otolemur_garnettii
ENSSPAG00000021398	snd1	95	86.237	ENSOARG00000002149	SND1	75	86.340	Ovis_aries
ENSSPAG00000021398	snd1	96	86.911	ENSPPAG00000042947	SND1	74	86.903	Pan_paniscus
ENSSPAG00000021398	snd1	99	85.110	ENSPPRG00000004494	SND1	75	85.110	Panthera_pardus
ENSSPAG00000021398	snd1	99	85.110	ENSPTIG00000014214	SND1	75	85.110	Panthera_tigris_altaica
ENSSPAG00000021398	snd1	96	86.911	ENSPTRG00000023911	SND1	74	86.903	Pan_troglodytes
ENSSPAG00000021398	snd1	96	86.911	ENSPANG00000011997	SND1	78	84.772	Papio_anubis
ENSSPAG00000021398	snd1	97	89.949	ENSPKIG00000023494	snd1	73	89.112	Paramormyrops_kingsleyae
ENSSPAG00000021398	snd1	92	93.636	ENSPMGG00000003629	snd1	74	93.636	Periophthalmus_magnuspinnatus
ENSSPAG00000021398	snd1	96	86.562	ENSPEMG00000010240	Snd1	73	84.433	Peromyscus_maniculatus_bairdii
ENSSPAG00000021398	snd1	95	79.012	ENSPMAG00000007915	-	72	79.012	Petromyzon_marinus
ENSSPAG00000021398	snd1	96	86.736	ENSPCIG00000011561	SND1	75	84.602	Phascolarctos_cinereus
ENSSPAG00000021398	snd1	99	94.924	ENSPFOG00000001557	snd1	73	94.924	Poecilia_formosa
ENSSPAG00000021398	snd1	99	95.093	ENSPLAG00000018459	snd1	71	95.093	Poecilia_latipinna
ENSSPAG00000021398	snd1	99	95.093	ENSPMEG00000006803	snd1	73	95.093	Poecilia_mexicana
ENSSPAG00000021398	snd1	99	94.924	ENSPREG00000002189	snd1	73	94.924	Poecilia_reticulata
ENSSPAG00000021398	snd1	96	87.086	ENSPPYG00000017972	SND1	82	84.941	Pongo_abelii
ENSSPAG00000021398	snd1	96	70.332	ENSPCAG00000011305	SND1	76	68.761	Procavia_capensis
ENSSPAG00000021398	snd1	96	86.911	ENSPCOG00000026791	SND1	95	84.300	Propithecus_coquereli
ENSSPAG00000021398	snd1	96	83.595	ENSPVAG00000013945	SND1	72	81.557	Pteropus_vampyrus
ENSSPAG00000021398	snd1	99	94.416	ENSPNYG00000000932	snd1	73	94.416	Pundamilia_nyererei
ENSSPAG00000021398	snd1	98	90.339	ENSPNAG00000001206	snd1	74	89.799	Pygocentrus_nattereri
ENSSPAG00000021398	snd1	96	86.038	ENSRNOG00000031173	Snd1	75	85.336	Rattus_norvegicus
ENSSPAG00000021398	snd1	95	87.430	ENSRBIG00000027782	-	93	87.476	Rhinopithecus_bieti
ENSSPAG00000021398	snd1	96	86.911	ENSRROG00000033020	SND1	76	84.772	Rhinopithecus_roxellana
ENSSPAG00000021398	snd1	96	86.736	ENSSBOG00000032461	SND1	93	86.819	Saimiri_boliviensis_boliviensis
ENSSPAG00000021398	snd1	95	82.250	ENSSHAG00000015359	SND1	74	82.250	Sarcophilus_harrisii
ENSSPAG00000021398	snd1	96	89.691	ENSSFOG00015001103	snd1	73	88.462	Scleropages_formosus
ENSSPAG00000021398	snd1	99	95.431	ENSSMAG00000001932	snd1	69	95.431	Scophthalmus_maximus
ENSSPAG00000021398	snd1	99	96.954	ENSSDUG00000002699	snd1	68	96.954	Seriola_dumerili
ENSSPAG00000021398	snd1	99	85.279	ENSSLDG00000001950	snd1	64	84.808	Seriola_lalandi_dorsalis
ENSSPAG00000021398	snd1	94	80.177	ENSSARG00000004877	SND1	75	80.177	Sorex_araneus
ENSSPAG00000021398	snd1	94	80.382	ENSSPUG00000017586	SND1	96	80.382	Sphenodon_punctatus
ENSSPAG00000021398	snd1	96	86.387	ENSSSCG00000016590	SND1	75	84.264	Sus_scrofa
ENSSPAG00000021398	snd1	99	95.290	ENSTRUG00000014067	snd1	73	92.893	Takifugu_rubripes
ENSSPAG00000021398	snd1	99	92.893	ENSTNIG00000011019	snd1	99	92.667	Tetraodon_nigroviridis
ENSSPAG00000021398	snd1	94	78.584	ENSTBEG00000003999	SND1	67	78.584	Tupaia_belangeri
ENSSPAG00000021398	snd1	96	80.628	ENSTTRG00000006059	SND1	75	78.680	Tursiops_truncatus
ENSSPAG00000021398	snd1	93	75.521	ENSUAMG00000002820	-	89	75.521	Ursus_americanus
ENSSPAG00000021398	snd1	79	88.835	ENSUAMG00000005604	-	52	88.835	Ursus_americanus
ENSSPAG00000021398	snd1	99	85.110	ENSUMAG00000005960	SND1	75	85.110	Ursus_maritimus
ENSSPAG00000021398	snd1	95	76.814	ENSVPAG00000008302	SND1	63	76.937	Vicugna_pacos
ENSSPAG00000021398	snd1	99	84.772	ENSVVUG00000007226	SND1	73	84.772	Vulpes_vulpes
ENSSPAG00000021398	snd1	94	85.664	ENSXETG00000023043	snd1	76	85.664	Xenopus_tropicalis
ENSSPAG00000021398	snd1	92	96.175	ENSXCOG00000013629	snd1	74	96.175	Xiphophorus_couchianus
ENSSPAG00000021398	snd1	99	95.601	ENSXMAG00000011469	snd1	73	95.601	Xiphophorus_maculatus