EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000021447 (Gene tree)
Gene ID: 103365904
Gene Symbol: mbd1b
Alias: mbd1|wu:fi45g12
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 16313 bases
Position: chrKK580959.1:320802-337114
Accession: 103365904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000028512	MBD	PF01429.19	1.5e-12	1	1
ENSSPAP00000028485	MBD	PF01429.19	1.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000028947	-	5503	XM_008293472	ENSSPAP00000028485	828 (aa)	XP_008291694	UPI0004959852
ENSSPAT00000028974	-	5341	-	ENSSPAP00000028512	774 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000021447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000021447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000021447	mbd1b	51	34.359	ENSG00000141644	MBD1	75	51.515	Homo_sapiens
ENSSPAG00000021447	mbd1b	99	84.727	ENSAPOG00000012810	mbd1b	100	84.485	Acanthochromis_polyacanthus
ENSSPAG00000021447	mbd1b	95	87.500	ENSACIG00000010590	mbd1b	88	87.500	Amphilophus_citrinellus
ENSSPAG00000021447	mbd1b	99	87.500	ENSAOCG00000020272	mbd1b	100	87.379	Amphiprion_ocellaris
ENSSPAG00000021447	mbd1b	99	87.394	ENSAPEG00000023230	mbd1b	100	87.273	Amphiprion_percula
ENSSPAG00000021447	mbd1b	99	77.365	ENSATEG00000009608	mbd1b	99	76.527	Anabas_testudineus
ENSSPAG00000021447	mbd1b	51	38.235	ENSANAG00000036253	MBD1	62	32.360	Aotus_nancymaae
ENSSPAG00000021447	mbd1b	99	78.410	ENSACLG00000021383	mbd1b	100	78.292	Astatotilapia_calliptera
ENSSPAG00000021447	mbd1b	51	38.235	ENSCJAG00000004959	MBD1	64	31.961	Callithrix_jacchus
ENSSPAG00000021447	mbd1b	51	38.235	ENSTSYG00000000509	MBD1	61	30.147	Carlito_syrichta
ENSSPAG00000021447	mbd1b	51	38.235	ENSCCAG00000034600	MBD1	67	34.595	Cebus_capucinus
ENSSPAG00000021447	mbd1b	55	32.407	ENSCATG00000029959	MBD1	51	48.913	Cercocebus_atys
ENSSPAG00000021447	mbd1b	51	34.359	ENSCANG00000033425	MBD1	51	51.111	Colobus_angolensis_palliatus
ENSSPAG00000021447	mbd1b	91	62.981	ENSCSEG00000009082	mbd1b	94	62.981	Cynoglossus_semilaevis
ENSSPAG00000021447	mbd1b	99	67.711	ENSCVAG00000001167	mbd1b	99	67.711	Cyprinodon_variegatus
ENSSPAG00000021447	mbd1b	91	49.432	ENSDARG00000025699	mbd1b	70	52.830	Danio_rerio
ENSSPAG00000021447	mbd1b	51	59.155	ENSDNOG00000015998	MBD1	63	52.128	Dasypus_novemcinctus
ENSSPAG00000021447	mbd1b	54	32.394	ENSEASG00005003857	MBD1	50	50.562	Equus_asinus_asinus
ENSSPAG00000021447	mbd1b	91	60.625	ENSELUG00000004375	mbd1b	83	61.538	Esox_lucius
ENSSPAG00000021447	mbd1b	56	31.250	ENSFCAG00000015730	MBD1	53	46.939	Felis_catus
ENSSPAG00000021447	mbd1b	99	65.375	ENSFHEG00000020120	mbd1b	99	65.375	Fundulus_heteroclitus
ENSSPAG00000021447	mbd1b	99	64.636	ENSGAFG00000008975	mbd1b	100	66.308	Gambusia_affinis
ENSSPAG00000021447	mbd1b	71	79.730	ENSGACG00000012106	-	99	79.730	Gasterosteus_aculeatus
ENSSPAG00000021447	mbd1b	51	34.359	ENSGGOG00000016966	MBD1	61	31.477	Gorilla_gorilla
ENSSPAG00000021447	mbd1b	99	78.648	ENSHBUG00000014270	mbd1b	100	78.529	Haplochromis_burtoni
ENSSPAG00000021447	mbd1b	99	58.809	ENSHCOG00000009952	mbd1b	93	60.921	Hippocampus_comes
ENSSPAG00000021447	mbd1b	92	38.556	ENSIPUG00000015243	-	95	37.944	Ictalurus_punctatus
ENSSPAG00000021447	mbd1b	99	67.028	ENSKMAG00000020760	mbd1b	99	68.275	Kryptolebias_marmoratus
ENSSPAG00000021447	mbd1b	64	39.568	ENSLACG00000002414	-	74	41.525	Latimeria_chalumnae
ENSSPAG00000021447	mbd1b	51	30.641	ENSLAFG00000031328	MBD1	65	30.682	Loxodonta_africana
ENSSPAG00000021447	mbd1b	55	31.713	ENSMFAG00000026335	MBD1	52	48.913	Macaca_fascicularis
ENSSPAG00000021447	mbd1b	55	31.481	ENSMMUG00000009050	MBD1	51	48.913	Macaca_mulatta
ENSSPAG00000021447	mbd1b	55	31.713	ENSMNEG00000038822	MBD1	52	48.913	Macaca_nemestrina
ENSSPAG00000021447	mbd1b	55	32.407	ENSMLEG00000043121	MBD1	51	48.913	Mandrillus_leucophaeus
ENSSPAG00000021447	mbd1b	79	76.061	ENSMAMG00000023341	-	96	76.803	Mastacembelus_armatus
ENSSPAG00000021447	mbd1b	99	78.529	ENSMZEG00005010421	mbd1b	100	78.410	Maylandia_zebra
ENSSPAG00000021447	mbd1b	92	73.871	ENSMMOG00000011607	mbd1b	89	95.833	Mola_mola
ENSSPAG00000021447	mbd1b	98	77.509	ENSMALG00000007808	mbd1b	99	76.867	Monopterus_albus
ENSSPAG00000021447	mbd1b	52	37.430	ENSNLEG00000011661	-	51	51.111	Nomascus_leucogenys
ENSSPAG00000021447	mbd1b	99	78.597	ENSONIG00000020289	mbd1b	99	78.597	Oreochromis_niloticus
ENSSPAG00000021447	mbd1b	96	80.745	ENSORLG00000029390	mbd1b	88	80.745	Oryzias_latipes
ENSSPAG00000021447	mbd1b	96	80.745	ENSORLG00020000575	mbd1b	88	80.745	Oryzias_latipes_hni
ENSSPAG00000021447	mbd1b	96	81.366	ENSORLG00015014812	mbd1b	88	81.366	Oryzias_latipes_hsok
ENSSPAG00000021447	mbd1b	96	78.882	ENSOMEG00000023660	mbd1b	88	78.882	Oryzias_melastigma
ENSSPAG00000021447	mbd1b	51	33.166	ENSPPAG00000038886	MBD1	50	51.111	Pan_paniscus
ENSSPAG00000021447	mbd1b	56	31.250	ENSPPRG00000021387	MBD1	53	46.939	Panthera_pardus
ENSSPAG00000021447	mbd1b	56	31.120	ENSPTIG00000021231	MBD1	53	46.939	Panthera_tigris_altaica
ENSSPAG00000021447	mbd1b	51	34.359	ENSPTRG00000010021	MBD1	51	51.111	Pan_troglodytes
ENSSPAG00000021447	mbd1b	55	32.407	ENSPANG00000010867	MBD1	51	48.913	Papio_anubis
ENSSPAG00000021447	mbd1b	99	64.663	ENSPFOG00000007511	mbd1b	100	65.505	Poecilia_formosa
ENSSPAG00000021447	mbd1b	99	63.822	ENSPLAG00000021258	mbd1b	100	65.264	Poecilia_latipinna
ENSSPAG00000021447	mbd1b	99	64.501	ENSPMEG00000024145	mbd1b	100	65.584	Poecilia_mexicana
ENSSPAG00000021447	mbd1b	99	64.217	ENSPREG00000021805	mbd1b	100	65.422	Poecilia_reticulata
ENSSPAG00000021447	mbd1b	55	35.468	ENSPCOG00000012450	MBD1	71	34.653	Propithecus_coquereli
ENSSPAG00000021447	mbd1b	86	51.163	ENSPNAG00000018075	mbd1b	92	39.417	Pygocentrus_nattereri
ENSSPAG00000021447	mbd1b	51	32.412	ENSRBIG00000041294	MBD1	66	31.555	Rhinopithecus_bieti
ENSSPAG00000021447	mbd1b	51	34.359	ENSRROG00000032517	MBD1	52	51.111	Rhinopithecus_roxellana
ENSSPAG00000021447	mbd1b	51	37.791	ENSSBOG00000027169	MBD1	58	34.764	Saimiri_boliviensis_boliviensis
ENSSPAG00000021447	mbd1b	78	46.539	ENSSFOG00015008591	-	65	55.063	Scleropages_formosus
ENSSPAG00000021447	mbd1b	94	75.561	ENSSMAG00000014640	mbd1b	84	75.561	Scophthalmus_maximus
ENSSPAG00000021447	mbd1b	91	83.268	ENSSDUG00000012996	mbd1b	100	75.338	Seriola_dumerili
ENSSPAG00000021447	mbd1b	81	69.065	ENSSLDG00000012422	mbd1b	98	68.345	Seriola_lalandi_dorsalis
ENSSPAG00000021447	mbd1b	51	35.673	ENSSSCG00000004516	MBD1	53	53.333	Sus_scrofa
ENSSPAG00000021447	mbd1b	99	65.459	ENSTRUG00000013422	mbd1b	100	64.862	Takifugu_rubripes
ENSSPAG00000021447	mbd1b	62	71.756	ENSTNIG00000007326	-	73	71.756	Tetraodon_nigroviridis
ENSSPAG00000021447	mbd1b	99	64.405	ENSXMAG00000005628	mbd1b	100	65.119	Xiphophorus_maculatus