EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000021649 (Gene tree)
Gene ID: 103358155
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 81520 bases
Position: chrKK580364.1:475866-557385
Accession: 103358155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000028792	ResIII	PF04851.15	3.9e-06	1	1
ENSSPAP00000028766	ResIII	PF04851.15	1.9e-05	1	1
ENSSPAP00000028792	BRK	PF07533.16	3.1e-32	1	2
ENSSPAP00000028792	BRK	PF07533.16	3.1e-32	2	2
ENSSPAP00000028766	BRK	PF07533.16	4.9e-32	1	2
ENSSPAP00000028766	BRK	PF07533.16	4.9e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000029258	-	10520	XM_008283008	ENSSPAP00000028792	2493 (aa)	XP_008281230	UPI00049603F0
ENSSPAT00000029231	-	12345	XM_008283004	ENSSPAP00000028766	3009 (aa)	XP_008281226	UPI000497C798

Gene Model

Click here to download ENSSPAG00000021649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000021649's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000021649	chd9	69	61.136	ENSSPAG00000022956	chd8	71	60.781
ENSSPAG00000021649	chd9	68	70.322	ENSSPAG00000006320	chd7	77	69.951

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000021649	chd9	98	68.383	ENSG00000177200	CHD9	96	70.505	Homo_sapiens
ENSSPAG00000021649	chd9	100	97.515	ENSAPOG00000023034	chd9	100	97.515	Acanthochromis_polyacanthus
ENSSPAG00000021649	chd9	67	75.119	ENSAMEG00000016232	CHD9	84	70.701	Ailuropoda_melanoleuca
ENSSPAG00000021649	chd9	97	88.085	ENSACIG00000004097	chd9	98	85.872	Amphilophus_citrinellus
ENSSPAG00000021649	chd9	100	97.715	ENSAOCG00000005487	chd9	100	97.715	Amphiprion_ocellaris
ENSSPAG00000021649	chd9	100	97.755	ENSAPEG00000009859	chd9	100	97.755	Amphiprion_percula
ENSSPAG00000021649	chd9	99	92.666	ENSATEG00000002748	chd9	99	87.944	Anabas_testudineus
ENSSPAG00000021649	chd9	98	69.721	ENSAPLG00000002826	CHD9	79	71.743	Anas_platyrhynchos
ENSSPAG00000021649	chd9	68	75.205	ENSACAG00000016150	CHD9	83	70.977	Anolis_carolinensis
ENSSPAG00000021649	chd9	99	60.747	ENSANAG00000015630	CHD9	92	69.366	Aotus_nancymaae
ENSSPAG00000021649	chd9	98	89.789	ENSACLG00000016899	chd9	94	86.565	Astatotilapia_calliptera
ENSSPAG00000021649	chd9	99	77.264	ENSAMXG00000005652	chd9	99	77.361	Astyanax_mexicanus
ENSSPAG00000021649	chd9	67	74.450	ENSBTAG00000002287	CHD9	84	69.987	Bos_taurus
ENSSPAG00000021649	chd9	67	74.776	ENSCJAG00000001573	CHD9	93	69.718	Callithrix_jacchus
ENSSPAG00000021649	chd9	67	74.970	ENSCAFG00000009699	CHD9	84	70.664	Canis_familiaris
ENSSPAG00000021649	chd9	67	74.970	ENSCAFG00020002879	CHD9	91	68.662	Canis_lupus_dingo
ENSSPAG00000021649	chd9	67	74.657	ENSTSYG00000007693	CHD9	91	69.014	Carlito_syrichta
ENSSPAG00000021649	chd9	75	60.135	ENSCAPG00000011604	CHD9	57	63.707	Cavia_aperea
ENSSPAG00000021649	chd9	67	70.816	ENSCPOG00000036544	CHD9	84	67.495	Cavia_porcellus
ENSSPAG00000021649	chd9	67	74.940	ENSCCAG00000036178	CHD9	92	69.965	Cebus_capucinus
ENSSPAG00000021649	chd9	67	74.955	ENSCATG00000036753	CHD9	92	68.750	Cercocebus_atys
ENSSPAG00000021649	chd9	67	74.866	ENSCLAG00000007137	CHD9	99	77.852	Chinchilla_lanigera
ENSSPAG00000021649	chd9	67	74.896	ENSCSAG00000005311	CHD9	84	70.514	Chlorocebus_sabaeus
ENSSPAG00000021649	chd9	71	91.146	ENSCHOG00000003935	CHD9	55	91.099	Choloepus_hoffmanni
ENSSPAG00000021649	chd9	90	82.388	ENSCPBG00000012459	CHD9	84	79.749	Chrysemys_picta_bellii
ENSSPAG00000021649	chd9	67	74.896	ENSCANG00000030349	CHD9	92	69.366	Colobus_angolensis_palliatus
ENSSPAG00000021649	chd9	98	68.237	ENSCGRG00001016150	Chd9	84	69.769	Cricetulus_griseus_chok1gshd
ENSSPAG00000021649	chd9	98	68.237	ENSCGRG00000012850	Chd9	99	77.962	Cricetulus_griseus_crigri
ENSSPAG00000021649	chd9	99	87.150	ENSCSEG00000009209	chd9	99	85.468	Cynoglossus_semilaevis
ENSSPAG00000021649	chd9	95	89.552	ENSCVAG00000016195	chd9	83	88.112	Cyprinodon_variegatus
ENSSPAG00000021649	chd9	99	77.441	ENSDARG00000074498	chd9	99	77.282	Danio_rerio
ENSSPAG00000021649	chd9	96	68.987	ENSDNOG00000006045	CHD9	96	70.385	Dasypus_novemcinctus
ENSSPAG00000021649	chd9	82	68.533	ENSDORG00000008523	-	96	70.430	Dipodomys_ordii
ENSSPAG00000021649	chd9	58	92.063	ENSETEG00000009565	CHD9	76	92.063	Echinops_telfairi
ENSSPAG00000021649	chd9	87	77.762	ENSEASG00005014832	CHD9	95	78.607	Equus_asinus_asinus
ENSSPAG00000021649	chd9	65	76.424	ENSECAG00000011505	CHD9	84	70.779	Equus_caballus
ENSSPAG00000021649	chd9	79	86.087	ENSEEUG00000014515	CHD9	73	83.978	Erinaceus_europaeus
ENSSPAG00000021649	chd9	99	78.701	ENSELUG00000006031	chd9	99	79.016	Esox_lucius
ENSSPAG00000021649	chd9	98	68.690	ENSFCAG00000022534	CHD9	91	69.014	Felis_catus
ENSSPAG00000021649	chd9	99	69.261	ENSFALG00000013276	CHD9	97	70.778	Ficedula_albicollis
ENSSPAG00000021649	chd9	67	74.408	ENSFDAG00000021037	CHD9	84	70.690	Fukomys_damarensis
ENSSPAG00000021649	chd9	99	89.023	ENSFHEG00000006068	chd9	99	88.822	Fundulus_heteroclitus
ENSSPAG00000021649	chd9	80	87.119	ENSGMOG00000006040	chd9	84	87.119	Gadus_morhua
ENSSPAG00000021649	chd9	93	71.701	ENSGALG00000039178	CHD9	80	72.371	Gallus_gallus
ENSSPAG00000021649	chd9	99	89.783	ENSGAFG00000010014	chd9	99	90.145	Gambusia_affinis
ENSSPAG00000021649	chd9	67	74.836	ENSGGOG00000014816	CHD9	92	69.014	Gorilla_gorilla
ENSSPAG00000021649	chd9	99	90.584	ENSHBUG00000023322	chd9	99	91.710	Haplochromis_burtoni
ENSSPAG00000021649	chd9	98	68.140	ENSHGLG00000014938	CHD9	96	80.856	Heterocephalus_glaber_female
ENSSPAG00000021649	chd9	96	84.584	ENSHCOG00000000937	chd9	99	83.693	Hippocampus_comes
ENSSPAG00000021649	chd9	99	78.037	ENSIPUG00000016448	chd9	97	81.690	Ictalurus_punctatus
ENSSPAG00000021649	chd9	67	74.776	ENSSTOG00000022273	CHD9	99	77.741	Ictidomys_tridecemlineatus
ENSSPAG00000021649	chd9	82	68.777	ENSJJAG00000015741	-	96	69.945	Jaculus_jaculus
ENSSPAG00000021649	chd9	99	90.157	ENSKMAG00000016784	chd9	99	90.664	Kryptolebias_marmoratus
ENSSPAG00000021649	chd9	99	91.238	ENSLBEG00000012077	chd9	99	91.516	Labrus_bergylta
ENSSPAG00000021649	chd9	98	65.100	ENSLACG00000005557	CHD9	83	67.155	Latimeria_chalumnae
ENSSPAG00000021649	chd9	99	76.536	ENSLOCG00000007225	chd9	99	76.052	Lepisosteus_oculatus
ENSSPAG00000021649	chd9	67	74.540	ENSLAFG00000015374	CHD9	84	69.963	Loxodonta_africana
ENSSPAG00000021649	chd9	94	69.811	ENSMFAG00000041354	CHD9	95	70.293	Macaca_fascicularis
ENSSPAG00000021649	chd9	67	74.955	ENSMMUG00000016310	CHD9	92	69.366	Macaca_mulatta
ENSSPAG00000021649	chd9	86	71.455	ENSMNEG00000031494	CHD9	85	72.423	Macaca_nemestrina
ENSSPAG00000021649	chd9	67	74.955	ENSMLEG00000043219	CHD9	92	69.366	Mandrillus_leucophaeus
ENSSPAG00000021649	chd9	99	92.305	ENSMAMG00000003909	chd9	93	89.649	Mastacembelus_armatus
ENSSPAG00000021649	chd9	99	93.038	ENSMZEG00005006581	chd9	99	93.481	Maylandia_zebra
ENSSPAG00000021649	chd9	98	64.640	ENSMGAG00000004642	CHD9	59	72.562	Meleagris_gallopavo
ENSSPAG00000021649	chd9	67	74.896	ENSMICG00000016679	CHD9	91	69.718	Microcebus_murinus
ENSSPAG00000021649	chd9	98	86.667	ENSMMOG00000016406	chd9	99	83.274	Mola_mola
ENSSPAG00000021649	chd9	87	73.062	ENSMODG00000013142	-	96	77.564	Monodelphis_domestica
ENSSPAG00000021649	chd9	98	88.979	ENSMALG00000013306	chd9	99	86.256	Monopterus_albus
ENSSPAG00000021649	chd9	67	74.006	MGP_CAROLIEiJ_G0031364	Chd9	84	70.030	Mus_caroli
ENSSPAG00000021649	chd9	98	67.758	ENSMUSG00000056608	Chd9	99	76.744	Mus_musculus
ENSSPAG00000021649	chd9	98	66.480	MGP_PahariEiJ_G0022964	Chd9	84	68.797	Mus_pahari
ENSSPAG00000021649	chd9	67	73.812	MGP_SPRETEiJ_G0032483	Chd9	84	69.873	Mus_spretus
ENSSPAG00000021649	chd9	67	75.149	ENSMPUG00000003285	CHD9	84	70.438	Mustela_putorius_furo
ENSSPAG00000021649	chd9	67	74.478	ENSMLUG00000004456	CHD9	83	70.654	Myotis_lucifugus
ENSSPAG00000021649	chd9	99	92.351	ENSNBRG00000009423	chd9	99	92.794	Neolamprologus_brichardi
ENSSPAG00000021649	chd9	67	74.896	ENSNLEG00000001026	CHD9	85	72.439	Nomascus_leucogenys
ENSSPAG00000021649	chd9	75	89.375	ENSMEUG00000008222	-	74	89.375	Notamacropus_eugenii
ENSSPAG00000021649	chd9	56	95.489	ENSOPRG00000011168	CHD9	70	85.475	Ochotona_princeps
ENSSPAG00000021649	chd9	99	60.564	ENSODEG00000004466	CHD9	84	70.716	Octodon_degus
ENSSPAG00000021649	chd9	97	92.026	ENSONIG00000002816	chd9	98	92.146	Oreochromis_niloticus
ENSSPAG00000021649	chd9	65	77.245	ENSOANG00000013401	CHD9	84	72.037	Ornithorhynchus_anatinus
ENSSPAG00000021649	chd9	99	68.377	ENSOCUG00000001016	CHD9	96	69.459	Oryctolagus_cuniculus
ENSSPAG00000021649	chd9	97	88.553	ENSORLG00000013810	chd9	97	86.203	Oryzias_latipes
ENSSPAG00000021649	chd9	97	83.395	ENSORLG00020020665	chd9	95	80.112	Oryzias_latipes_hni
ENSSPAG00000021649	chd9	98	88.560	ENSORLG00015019126	chd9	97	88.889	Oryzias_latipes_hsok
ENSSPAG00000021649	chd9	55	89.343	ENSOMEG00000015978	chd9	91	83.536	Oryzias_melastigma
ENSSPAG00000021649	chd9	98	68.396	ENSOGAG00000002110	CHD9	79	70.029	Otolemur_garnettii
ENSSPAG00000021649	chd9	67	74.437	ENSOARG00000017664	CHD9	84	70.426	Ovis_aries
ENSSPAG00000021649	chd9	97	67.977	ENSPPAG00000039388	-	96	69.792	Pan_paniscus
ENSSPAG00000021649	chd9	98	68.770	ENSPPRG00000004801	CHD9	91	69.718	Panthera_pardus
ENSSPAG00000021649	chd9	98	67.645	ENSPTIG00000021854	CHD9	91	60.211	Panthera_tigris_altaica
ENSSPAG00000021649	chd9	67	74.836	ENSPTRG00000008113	CHD9	92	69.014	Pan_troglodytes
ENSSPAG00000021649	chd9	99	68.029	ENSPANG00000019307	CHD9	96	70.170	Papio_anubis
ENSSPAG00000021649	chd9	98	71.585	ENSPKIG00000025401	-	90	68.382	Paramormyrops_kingsleyae
ENSSPAG00000021649	chd9	96	78.798	ENSPKIG00000021876	chd9	99	77.635	Paramormyrops_kingsleyae
ENSSPAG00000021649	chd9	56	76.940	ENSPSIG00000008099	CHD9	78	78.772	Pelodiscus_sinensis
ENSSPAG00000021649	chd9	86	71.323	ENSPCIG00000017215	CHD9	99	71.105	Phascolarctos_cinereus
ENSSPAG00000021649	chd9	99	89.746	ENSPFOG00000015839	chd9	93	87.781	Poecilia_formosa
ENSSPAG00000021649	chd9	99	89.823	ENSPLAG00000011118	chd9	99	90.386	Poecilia_latipinna
ENSSPAG00000021649	chd9	99	87.364	ENSPMEG00000015106	chd9	83	87.848	Poecilia_mexicana
ENSSPAG00000021649	chd9	97	91.432	ENSPREG00000006473	chd9	99	89.908	Poecilia_reticulata
ENSSPAG00000021649	chd9	67	74.836	ENSPPYG00000007348	CHD9	85	70.021	Pongo_abelii
ENSSPAG00000021649	chd9	72	80.000	ENSPCAG00000007564	CHD9	73	81.912	Procavia_capensis
ENSSPAG00000021649	chd9	67	72.510	ENSPCOG00000028433	CHD9	91	68.662	Propithecus_coquereli
ENSSPAG00000021649	chd9	94	72.368	ENSPVAG00000015617	CHD9	81	73.948	Pteropus_vampyrus
ENSSPAG00000021649	chd9	99	92.837	ENSPNYG00000010947	chd9	99	92.757	Pundamilia_nyererei
ENSSPAG00000021649	chd9	99	78.401	ENSPNAG00000024141	chd9	99	78.370	Pygocentrus_nattereri
ENSSPAG00000021649	chd9	86	68.176	ENSRNOG00000049302	Chd9	93	57.712	Rattus_norvegicus
ENSSPAG00000021649	chd9	98	68.489	ENSRBIG00000035553	CHD9	96	70.170	Rhinopithecus_bieti
ENSSPAG00000021649	chd9	96	69.300	ENSRROG00000033278	CHD9	97	70.183	Rhinopithecus_roxellana
ENSSPAG00000021649	chd9	97	68.785	ENSSBOG00000030240	CHD9	93	69.718	Saimiri_boliviensis_boliviensis
ENSSPAG00000021649	chd9	98	68.957	ENSSHAG00000002719	CHD9	84	70.640	Sarcophilus_harrisii
ENSSPAG00000021649	chd9	96	78.891	ENSSFOG00015020209	chd9	99	77.742	Scleropages_formosus
ENSSPAG00000021649	chd9	98	74.143	ENSSFOG00015001327	chd9	98	74.503	Scleropages_formosus
ENSSPAG00000021649	chd9	99	92.249	ENSSMAG00000008953	chd9	99	92.794	Scophthalmus_maximus
ENSSPAG00000021649	chd9	99	93.632	ENSSDUG00000006139	chd9	99	93.712	Seriola_dumerili
ENSSPAG00000021649	chd9	99	94.196	ENSSLDG00000017818	chd9	99	94.277	Seriola_lalandi_dorsalis
ENSSPAG00000021649	chd9	71	77.314	ENSSARG00000010632	CHD9	55	77.519	Sorex_araneus
ENSSPAG00000021649	chd9	87	72.401	ENSTGUG00000007476	CHD9	86	73.694	Taeniopygia_guttata
ENSSPAG00000021649	chd9	99	86.316	ENSTRUG00000009125	chd9	99	84.383	Takifugu_rubripes
ENSSPAG00000021649	chd9	77	69.863	ENSTNIG00000003825	chd9	84	99.408	Tetraodon_nigroviridis
ENSSPAG00000021649	chd9	60	94.915	ENSTBEG00000016052	-	63	94.915	Tupaia_belangeri
ENSSPAG00000021649	chd9	84	71.255	ENSTTRG00000012674	CHD9	77	71.449	Tursiops_truncatus
ENSSPAG00000021649	chd9	78	85.998	ENSUMAG00000004043	CHD9	95	86.359	Ursus_maritimus
ENSSPAG00000021649	chd9	71	75.322	ENSVPAG00000001374	CHD9	81	69.067	Vicugna_pacos
ENSSPAG00000021649	chd9	67	74.911	ENSVVUG00000019435	CHD9	84	70.623	Vulpes_vulpes
ENSSPAG00000021649	chd9	96	66.802	ENSXETG00000000349	chd9	78	75.243	Xenopus_tropicalis
ENSSPAG00000021649	chd9	99	88.898	ENSXCOG00000012997	chd9	99	89.382	Xiphophorus_couchianus
ENSSPAG00000021649	chd9	99	90.346	ENSXMAG00000016192	chd9	99	90.718	Xiphophorus_maculatus